CX297557

Overview
NameCX297557
Unique NameCX297557
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length542
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX297557 vs. ExPASy Swiss-Prot
Match: MLO6_ARATH (MLO-like protein 6 OS=Arabidopsis thaliana GN=MLO6 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 3.691e-14
Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = 2
Query:   20 DIIIKIVLGVVVHMLCGYVTLPLYALVTQMGSSMKNAVFPESVAHGLKRWRGRARKNL---RTNDY---YSARPSS 229
            D+II+I +G++V +LC YVTLPLYALVTQMGS MK  VF E VA  LK W   A+KN+   RT++    +S+RP++
Sbjct:  407 DVIIRISIGLLVQILCSYVTLPLYALVTQMGSKMKPTVFNERVATALKSWHHTAKKNIKHGRTSESTTPFSSRPTT 482          
BLAST of CX297557 vs. ExPASy Swiss-Prot
Match: MLO12_ARATH (MLO-like protein 12 OS=Arabidopsis thaliana GN=MLO12 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 3.691e-14
Identity = 36/76 (47.37%), Postives = 55/76 (72.37%), Query Frame = 2
Query:   17 EDIIIKIVLGVVVHMLCGYVTLPLYALVTQMGSSMKNAVFPESVAHGLKRWRGRARKNLR-----TNDYYSARPSS 229
            EDI I+I +GV++ +LC Y+TLPLYALVTQMG+SM+  +F + VA+ LK+W   A+K  +     +N  +S+RP++
Sbjct:  400 EDIAIRITMGVLIQVLCSYITLPLYALVTQMGTSMRPTIFNDRVANALKKWHHTAKKQTKHGHSGSNTPHSSRPTT 475          
BLAST of CX297557 vs. ExPASy Swiss-Prot
Match: MLO2_ARATH (MLO-like protein 2 OS=Arabidopsis thaliana GN=MLO2 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.403e-13
Identity = 37/76 (48.68%), Postives = 52/76 (68.42%), Query Frame = 2
Query:   20 DIIIKIVLGVVVHMLCGYVTLPLYALVTQMGSSMKNAVFPESVAHGLKRWRGRARKNLR------TNDYYSARPSS 229
            D++I++V+G VV +LC YVTLPLYALVTQMGS MK  VF + VA  LK+W   A+   +      +N  +S+RP++
Sbjct:  410 DVVIRLVVGAVVQILCSYVTLPLYALVTQMGSKMKPTVFNDRVATALKKWHHTAKNETKHGRHSGSNTPFSSRPTT 485          
BLAST of CX297557 vs. ExPASy Swiss-Prot
Match: MLO9_ARATH (MLO-like protein 9 OS=Arabidopsis thaliana GN=MLO9 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.025e-12
Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = 2
Query:   23 IIIKIVLGVVVHMLCGYVTLPLYALVTQMGSSMKNAVFPESVAHGLKRWRGRARK 187
            III++ LGV V  LC Y+TLPLYALVTQMGS+MK +VF E  +  L++W  +ARK
Sbjct:  402 IIIRVCLGVGVQFLCSYITLPLYALVTQMGSTMKRSVFDEQTSKALEQWHKKARK 456          
BLAST of CX297557 vs. ExPASy Swiss-Prot
Match: MLO5_ARATH (MLO-like protein 5 OS=Arabidopsis thaliana GN=MLO5 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.645e-12
Identity = 33/59 (55.93%), Postives = 41/59 (69.49%), Query Frame = 2
Query:   23 IIIKIVLGVVVHMLCGYVTLPLYALVTQMGSSMKNAVFPESVAHGLKRWRGRARKNLRT 199
            III++ LGV V  LC Y+TLPLYALVTQMGS+MK +VF +  +  LK W   A+K   T
Sbjct:  395 IIIRVALGVGVQFLCSYITLPLYALVTQMGSTMKRSVFDDQTSKALKNWHKNAKKKSET 453          
BLAST of CX297557 vs. ExPASy Swiss-Prot
Match: MLO10_ARATH (MLO-like protein 10 OS=Arabidopsis thaliana GN=MLO10 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.455e-12
Identity = 40/80 (50.00%), Postives = 51/80 (63.75%), Query Frame = 2
Query:   23 IIIKIVLGVVVHMLCGYVTLPLYALVTQMGSSMKNAVFPESVAHGLKRW-------RGRARK----NLRTNDYYSARPSS 229
            +I+K+ LGV   +LC Y+TLPLYALVTQMGS+MK AVF E +A  LK+W       +G+ARK     L  +D  S   SS
Sbjct:  408 VIVKLSLGVGALILCSYITLPLYALVTQMGSNMKKAVFDEQMAKALKKWHMTVKKKKGKARKPPTETLGVSDTVSTSTSS 487          
BLAST of CX297557 vs. ExPASy Swiss-Prot
Match: MLOH1_HORVU (MLO protein homolog 1 OS=Hordeum vulgare GN=MLO-H1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.313e-11
Identity = 31/60 (51.67%), Postives = 39/60 (65.00%), Query Frame = 2
Query:   26 IIKIVLGVVVHMLCGYVTLPLYALVTQMGSSMKNAVFPESVAHGLKRWRGRARKNLRTND 205
            I K+VLGV   +LC Y+T PLYALVTQMGS MK ++F E  A  L  WR  A++  +  D
Sbjct:  399 IAKVVLGVAAQILCSYITFPLYALVTQMGSHMKRSIFDEQTAKALTNWRKMAKEKKKARD 458          
BLAST of CX297557 vs. ExPASy Swiss-Prot
Match: MLO_HORVU (Protein MLO OS=Hordeum vulgare GN=MLO PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.989e-11
Identity = 28/60 (46.67%), Postives = 41/60 (68.33%), Query Frame = 2
Query:   26 IIKIVLGVVVHMLCGYVTLPLYALVTQMGSSMKNAVFPESVAHGLKRWRGRARKNLRTND 205
            I+K+V+G+ +  LC Y+T PLYALVTQMGS+MK ++F E  +  L  WR  A++  +  D
Sbjct:  376 IMKVVVGLALQFLCSYMTFPLYALVTQMGSNMKRSIFDEQTSKALTNWRNTAKEKKKVRD 435          
BLAST of CX297557 vs. ExPASy Swiss-Prot
Match: MLOH1_ORYSJ (MLO protein homolog 1 OS=Oryza sativa subsp. japonica GN=MLO1 PE=3 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 8.510e-11
Identity = 30/69 (43.48%), Postives = 46/69 (66.67%), Query Frame = 2
Query:   26 IIKIVLGVVVHMLCGYVTLPLYALVTQMGSSMKNAVFPESVAHGLKRWRGRA--RKNLRTNDYYSARPS 226
            I+++++G+ + +LC Y+T PLYALVTQMGS+MK  +F E     L  WR +A  +K +R  D + A+ S
Sbjct:  388 IVEVIVGISLQVLCSYITFPLYALVTQMGSNMKKTIFEEQTMKALMNWRKKAMEKKKVRDADAFLAQMS 456          
BLAST of CX297557 vs. ExPASy Swiss-Prot
Match: MLOH1_ORYSI (MLO protein homolog 1 OS=Oryza sativa subsp. indica GN=MLO1 PE=3 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 8.510e-11
Identity = 30/69 (43.48%), Postives = 46/69 (66.67%), Query Frame = 2
Query:   26 IIKIVLGVVVHMLCGYVTLPLYALVTQMGSSMKNAVFPESVAHGLKRWRGRA--RKNLRTNDYYSARPS 226
            I+++++G+ + +LC Y+T PLYALVTQMGS+MK  +F E     L  WR +A  +K +R  D + A+ S
Sbjct:  388 IVEVIVGISLQVLCSYITFPLYALVTQMGSNMKKTIFEEQTMKALMNWRKKAMEKKKVRDADAFLAQMS 456          
The following BLAST results are available for this feature:
BLAST of CX297557 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
MLO6_ARATH3.691e-1453.95MLO-like protein 6 OS=Arabidopsis thaliana GN=MLO6... [more]
MLO12_ARATH3.691e-1447.37MLO-like protein 12 OS=Arabidopsis thaliana GN=MLO... [more]
MLO2_ARATH1.403e-1348.68MLO-like protein 2 OS=Arabidopsis thaliana GN=MLO2... [more]
MLO9_ARATH2.025e-1260.00MLO-like protein 9 OS=Arabidopsis thaliana GN=MLO9... [more]
MLO5_ARATH2.645e-1255.93MLO-like protein 5 OS=Arabidopsis thaliana GN=MLO5... [more]
MLO10_ARATH3.455e-1250.00MLO-like protein 10 OS=Arabidopsis thaliana GN=MLO... [more]
MLOH1_HORVU1.313e-1151.67MLO protein homolog 1 OS=Hordeum vulgare GN=MLO-H1... [more]
MLO_HORVU4.989e-1146.67Protein MLO OS=Hordeum vulgare GN=MLO PE=1 SV=1[more]
MLOH1_ORYSJ8.510e-1143.48MLO protein homolog 1 OS=Oryza sativa subsp. japon... [more]
MLOH1_ORYSI8.510e-1143.48MLO protein homolog 1 OS=Oryza sativa subsp. indic... [more]
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Properties
Property NameValue
Genbank descriptionC06002G07SK RindPdig24 Citrus clementina cDNA clone C06002G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297557 ID=CX297557; Name=CX297557; organism=Citrus clementina; type=EST; length=542bp
GAATTCGGCACGAGGAGAAGACATTATCATAAAGATAGTGTTGGGAGTGG
TAGTACACATGCTTTGTGGCTATGTAACGCTACCTCTCTATGCTTTGGTG
ACGCAGATGGGATCATCAATGAAGAATGCGGTTTTCCCAGAAAGTGTGGC
TCATGGACTCAAAAGATGGCGAGGCAGAGCTAGAAAAAACCTCAGGACCA
ATGATTATTACTCAGCGAGACCCTCATCAGTCGATGATGCCCCAGTTTCC
CTGGACGCTTCGCTTTCTCTTGATGCCTCGCCTTCTTTTTCCCTTCATCC
TTCATATTCTGTTGACCTTGAAGTCTTGAACGTGATCCTCCACCCGATTT
AAAGGACACTGAATTTGTTGCTGTTGAAATTGATGATGGACAAGTTGGCA
AACAGCAACAAAAAATATGAATTCCTTCCATGGGTTTGATGTGAGCAATA
CAGCATCAACGTAACATATGTATACACAAACGCGCGCACGCACACACGAC
ACGAAGGTAGAAATTTAACAAGGCCTCAGTTTTGGTGATTCA
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