CX297566
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX297566 vs. ExPASy Swiss-Prot
Match: RAN_VICFA (GTP-binding nuclear protein Ran/TC4 OS=Vicia faba PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 9.520e-71 Identity = 92/126 (73.02%), Postives = 98/126 (77.78%), Query Frame = 2 Query: 185 EVHRISDFFTNCGKIRFYCWDTVGQDKFGGLIDGYYIRGQCAIFMFDVTARLTYNSVPTWHRDLCRVCENIPIVLCGNKVYVNNMSVICLRVTFHRKKNLQYYEIVARAITTLRSLFFTLPENLLG 562 EVH + DFFTNCGKIRFYCWDT GQ+KFGGL DGYYI GQCAI MFDVTARLTY +VPTWHRDLCRVCENIPIVLCGNKV V N V +VTFHRKKNLQYYEI A++ F L L G Sbjct: 49 EVHPL-DFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173 HSP 2 Score: 93.5893 bits (231), Expect = 9.520e-71 Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 1 Query: 46 LPNHQTVDYPSFKLVIVGDGGSGKTTFVKRHLTGEFKKKYEPTIGV 183 LPN QTVDYPSFKLVIVGDGG+GKTTFVKRHLTGEF+KKYEPTIGV Sbjct: 3 LPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGV 48 HSP 3 Score: 75.485 bits (184), Expect = 2.544e-13 Identity = 34/41 (82.93%), Postives = 39/41 (95.12%), Query Frame = 1 Query: 505 QSNYNFEKPFLYLARELAGDPNLHFDQSPALAPPEVQIDLS 627 +SNYNFEKPFLYLAR+LAGD NLHF +SPALAPPEVQID++ Sbjct: 155 KSNYNFEKPFLYLARKLAGDANLHFVESPALAPPEVQIDIA 195
BLAST of CX297566 vs. ExPASy Swiss-Prot
Match: RANB1_TOBAC (GTP-binding nuclear protein Ran-B1 OS=Nicotiana tabacum GN=RAN-B1 PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 9.520e-71 Identity = 92/126 (73.02%), Postives = 98/126 (77.78%), Query Frame = 2 Query: 185 EVHRISDFFTNCGKIRFYCWDTVGQDKFGGLIDGYYIRGQCAIFMFDVTARLTYNSVPTWHRDLCRVCENIPIVLCGNKVYVNNMSVICLRVTFHRKKNLQYYEIVARAITTLRSLFFTLPENLLG 562 EVH + DFFTNCGKIRFYCWDT GQ+KFGGL DGYYI GQCAI MFDVTARLTY +VPTWHRDLCRVCENIPIVLCGNKV V N V +VTFHRKKNLQYYEI A++ F L L G Sbjct: 49 EVHPL-DFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173 HSP 2 Score: 93.5893 bits (231), Expect = 9.520e-71 Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 1 Query: 46 LPNHQTVDYPSFKLVIVGDGGSGKTTFVKRHLTGEFKKKYEPTIGV 183 LPN QTVDYPSFKLVIVGDGG+GKTTFVKRHLTGEF+KKYEPTIGV Sbjct: 3 LPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGV 48 HSP 3 Score: 77.7962 bits (190), Expect = 5.125e-14 Identity = 36/42 (85.71%), Postives = 40/42 (95.24%), Query Frame = 1 Query: 505 QSNYNFEKPFLYLARELAGDPNLHFDQSPALAPPEVQIDLSA 630 +SNYNFEKPFLYLAR+LAGD NLHF +SPALAPPEVQIDL+A Sbjct: 155 KSNYNFEKPFLYLARKLAGDANLHFVESPALAPPEVQIDLAA 196
BLAST of CX297566 vs. ExPASy Swiss-Prot
Match: RAN3_ARATH (GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana GN=RAN3 PE=1 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 9.520e-71 Identity = 92/126 (73.02%), Postives = 98/126 (77.78%), Query Frame = 2 Query: 185 EVHRISDFFTNCGKIRFYCWDTVGQDKFGGLIDGYYIRGQCAIFMFDVTARLTYNSVPTWHRDLCRVCENIPIVLCGNKVYVNNMSVICLRVTFHRKKNLQYYEIVARAITTLRSLFFTLPENLLG 562 EVH + DFFTNCGKIRFYCWDT GQ+KFGGL DGYYI GQCAI MFDVTARLTY +VPTWHRDLCRVCENIPIVLCGNKV V N V +VTFHRKKNLQYYEI A++ F L L G Sbjct: 49 EVHPL-DFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173 HSP 2 Score: 93.5893 bits (231), Expect = 9.520e-71 Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 1 Query: 46 LPNHQTVDYPSFKLVIVGDGGSGKTTFVKRHLTGEFKKKYEPTIGV 183 LPN QTVDYPSFKLVIVGDGG+GKTTFVKRHLTGEF+KKYEPTIGV Sbjct: 3 LPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGV 48 HSP 3 Score: 77.7962 bits (190), Expect = 5.125e-14 Identity = 36/42 (85.71%), Postives = 40/42 (95.24%), Query Frame = 1 Query: 505 QSNYNFEKPFLYLARELAGDPNLHFDQSPALAPPEVQIDLSA 630 +SNYNFEKPFLYLAR+LAGD NLHF +SPALAPPEVQIDL+A Sbjct: 155 KSNYNFEKPFLYLARKLAGDANLHFVESPALAPPEVQIDLAA 196
BLAST of CX297566 vs. ExPASy Swiss-Prot
Match: RAN2_SOLLC (GTP-binding nuclear protein Ran2 OS=Solanum lycopersicum GN=RAN2 PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 9.520e-71 Identity = 92/126 (73.02%), Postives = 98/126 (77.78%), Query Frame = 2 Query: 185 EVHRISDFFTNCGKIRFYCWDTVGQDKFGGLIDGYYIRGQCAIFMFDVTARLTYNSVPTWHRDLCRVCENIPIVLCGNKVYVNNMSVICLRVTFHRKKNLQYYEIVARAITTLRSLFFTLPENLLG 562 EVH + DFFTNCGKIRFYCWDT GQ+KFGGL DGYYI GQCAI MFDVTARLTY +VPTWHRDLCRVCENIPIVLCGNKV V N V +VTFHRKKNLQYYEI A++ F L L G Sbjct: 49 EVHPL-DFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173 HSP 2 Score: 93.5893 bits (231), Expect = 9.520e-71 Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 1 Query: 46 LPNHQTVDYPSFKLVIVGDGGSGKTTFVKRHLTGEFKKKYEPTIGV 183 LPN QTVDYPSFKLVIVGDGG+GKTTFVKRHLTGEF+KKYEPTIGV Sbjct: 3 LPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGV 48 HSP 3 Score: 77.411 bits (189), Expect = 6.694e-14 Identity = 36/42 (85.71%), Postives = 40/42 (95.24%), Query Frame = 1 Query: 505 QSNYNFEKPFLYLARELAGDPNLHFDQSPALAPPEVQIDLSA 630 +SNYNFEKPFLYLAR+LAGD NLHF +SPALAPPEVQIDL+A Sbjct: 155 KSNYNFEKPFLYLARKLAGDGNLHFVESPALAPPEVQIDLAA 196
BLAST of CX297566 vs. ExPASy Swiss-Prot
Match: RAN2_ARATH (GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana GN=RAN2 PE=1 SV=3) HSP 1 Score: 193.356 bits (490), Expect = 9.520e-71 Identity = 92/126 (73.02%), Postives = 98/126 (77.78%), Query Frame = 2 Query: 185 EVHRISDFFTNCGKIRFYCWDTVGQDKFGGLIDGYYIRGQCAIFMFDVTARLTYNSVPTWHRDLCRVCENIPIVLCGNKVYVNNMSVICLRVTFHRKKNLQYYEIVARAITTLRSLFFTLPENLLG 562 EVH + DFFTNCGKIRFYCWDT GQ+KFGGL DGYYI GQCAI MFDVTARLTY +VPTWHRDLCRVCENIPIVLCGNKV V N V +VTFHRKKNLQYYEI A++ F L L G Sbjct: 49 EVHPL-DFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173 HSP 2 Score: 93.5893 bits (231), Expect = 9.520e-71 Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 1 Query: 46 LPNHQTVDYPSFKLVIVGDGGSGKTTFVKRHLTGEFKKKYEPTIGV 183 LPN QTVDYPSFKLVIVGDGG+GKTTFVKRHLTGEF+KKYEPTIGV Sbjct: 3 LPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGV 48 HSP 3 Score: 74.3294 bits (181), Expect = 5.666e-13 Identity = 33/42 (78.57%), Postives = 39/42 (92.86%), Query Frame = 1 Query: 505 QSNYNFEKPFLYLARELAGDPNLHFDQSPALAPPEVQIDLSA 630 +SNYNFEKPFLYLAR+LAGD NLHF +SPALAPPEV +D++A Sbjct: 155 KSNYNFEKPFLYLARKLAGDQNLHFVESPALAPPEVHLDIAA 196
BLAST of CX297566 vs. ExPASy Swiss-Prot
Match: RAN1_SOLLC (GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum GN=RAN1 PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 9.520e-71 Identity = 92/126 (73.02%), Postives = 98/126 (77.78%), Query Frame = 2 Query: 185 EVHRISDFFTNCGKIRFYCWDTVGQDKFGGLIDGYYIRGQCAIFMFDVTARLTYNSVPTWHRDLCRVCENIPIVLCGNKVYVNNMSVICLRVTFHRKKNLQYYEIVARAITTLRSLFFTLPENLLG 562 EVH + DFFTNCGKIRFYCWDT GQ+KFGGL DGYYI GQCAI MFDVTARLTY +VPTWHRDLCRVCENIPIVLCGNKV V N V +VTFHRKKNLQYYEI A++ F L L G Sbjct: 49 EVHPL-DFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173 HSP 2 Score: 93.5893 bits (231), Expect = 9.520e-71 Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 1 Query: 46 LPNHQTVDYPSFKLVIVGDGGSGKTTFVKRHLTGEFKKKYEPTIGV 183 LPN QTVDYPSFKLVIVGDGG+GKTTFVKRHLTGEF+KKYEPTIGV Sbjct: 3 LPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGV 48 HSP 3 Score: 75.485 bits (184), Expect = 2.544e-13 Identity = 35/42 (83.33%), Postives = 39/42 (92.86%), Query Frame = 1 Query: 505 QSNYNFEKPFLYLARELAGDPNLHFDQSPALAPPEVQIDLSA 630 +SNYNFEKPFLYLAR+LAGD NLHF +SPALAPPEV IDL+A Sbjct: 155 KSNYNFEKPFLYLARKLAGDGNLHFVESPALAPPEVHIDLAA 196
BLAST of CX297566 vs. ExPASy Swiss-Prot
Match: RAN1_ARATH (GTP-binding nuclear protein Ran-1 OS=Arabidopsis thaliana GN=RAN1 PE=1 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 9.520e-71 Identity = 92/126 (73.02%), Postives = 98/126 (77.78%), Query Frame = 2 Query: 185 EVHRISDFFTNCGKIRFYCWDTVGQDKFGGLIDGYYIRGQCAIFMFDVTARLTYNSVPTWHRDLCRVCENIPIVLCGNKVYVNNMSVICLRVTFHRKKNLQYYEIVARAITTLRSLFFTLPENLLG 562 EVH + DFFTNCGKIRFYCWDT GQ+KFGGL DGYYI GQCAI MFDVTARLTY +VPTWHRDLCRVCENIPIVLCGNKV V N V +VTFHRKKNLQYYEI A++ F L L G Sbjct: 49 EVHPL-DFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173 HSP 2 Score: 93.5893 bits (231), Expect = 9.520e-71 Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 1 Query: 46 LPNHQTVDYPSFKLVIVGDGGSGKTTFVKRHLTGEFKKKYEPTIGV 183 LPN QTVDYPSFKLVIVGDGG+GKTTFVKRHLTGEF+KKYEPTIGV Sbjct: 3 LPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGV 48 HSP 3 Score: 72.4034 bits (176), Expect = 2.153e-12 Identity = 32/41 (78.05%), Postives = 38/41 (92.68%), Query Frame = 1 Query: 505 QSNYNFEKPFLYLARELAGDPNLHFDQSPALAPPEVQIDLS 627 +SNYNFEKPFLYLAR+LAGD NLHF ++PALAPPEV ID++ Sbjct: 155 KSNYNFEKPFLYLARKLAGDQNLHFVETPALAPPEVHIDIA 195
BLAST of CX297566 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSJ (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica GN=RAN1 PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.754e-70 Identity = 90/126 (71.43%), Postives = 98/126 (77.78%), Query Frame = 2 Query: 185 EVHRISDFFTNCGKIRFYCWDTVGQDKFGGLIDGYYIRGQCAIFMFDVTARLTYNSVPTWHRDLCRVCENIPIVLCGNKVYVNNMSVICLRVTFHRKKNLQYYEIVARAITTLRSLFFTLPENLLG 562 EVH + DFFTNCGKIRFYCWDT GQ+KFGGL DGYYI GQCAI MFDVT+RLTY +VPTWHRDLCRVCENIPIVLCGNKV V N V +VTFHRKKNLQYYE+ A++ F L L G Sbjct: 49 EVHPL-DFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEVSAKSNYNFEKPFLYLARKLAG 173 HSP 2 Score: 93.5893 bits (231), Expect = 2.754e-70 Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 1 Query: 46 LPNHQTVDYPSFKLVIVGDGGSGKTTFVKRHLTGEFKKKYEPTIGV 183 LPN QTVDYPSFKLVIVGDGG+GKTTFVKRHLTGEF+KKYEPTIGV Sbjct: 3 LPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGV 48 HSP 3 Score: 72.7886 bits (177), Expect = 1.649e-12 Identity = 33/42 (78.57%), Postives = 39/42 (92.86%), Query Frame = 1 Query: 505 QSNYNFEKPFLYLARELAGDPNLHFDQSPALAPPEVQIDLSA 630 +SNYNFEKPFLYLAR+LAGD NLHF ++PALAPP+V IDL+A Sbjct: 155 KSNYNFEKPFLYLARKLAGDGNLHFVETPALAPPDVTIDLAA 196
BLAST of CX297566 vs. ExPASy Swiss-Prot
Match: RAN1_ORYSI (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica GN=RAN1 PE=2 SV=2) HSP 1 Score: 191.815 bits (486), Expect = 2.754e-70 Identity = 90/126 (71.43%), Postives = 98/126 (77.78%), Query Frame = 2 Query: 185 EVHRISDFFTNCGKIRFYCWDTVGQDKFGGLIDGYYIRGQCAIFMFDVTARLTYNSVPTWHRDLCRVCENIPIVLCGNKVYVNNMSVICLRVTFHRKKNLQYYEIVARAITTLRSLFFTLPENLLG 562 EVH + DFFTNCGKIRFYCWDT GQ+KFGGL DGYYI GQCAI MFDVT+RLTY +VPTWHRDLCRVCENIPIVLCGNKV V N V +VTFHRKKNLQYYE+ A++ F L L G Sbjct: 49 EVHPL-DFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEVSAKSNYNFEKPFLYLARKLAG 173 HSP 2 Score: 93.5893 bits (231), Expect = 2.754e-70 Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 1 Query: 46 LPNHQTVDYPSFKLVIVGDGGSGKTTFVKRHLTGEFKKKYEPTIGV 183 LPN QTVDYPSFKLVIVGDGG+GKTTFVKRHLTGEF+KKYEPTIGV Sbjct: 3 LPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGV 48 HSP 3 Score: 72.7886 bits (177), Expect = 1.649e-12 Identity = 33/42 (78.57%), Postives = 39/42 (92.86%), Query Frame = 1 Query: 505 QSNYNFEKPFLYLARELAGDPNLHFDQSPALAPPEVQIDLSA 630 +SNYNFEKPFLYLAR+LAGD NLHF ++PALAPP+V IDL+A Sbjct: 155 KSNYNFEKPFLYLARKLAGDGNLHFVETPALAPPDVTIDLAA 196
BLAST of CX297566 vs. ExPASy Swiss-Prot
Match: RANA1_TOBAC (GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum GN=RAN-A1 PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.767e-69 Identity = 92/126 (73.02%), Postives = 98/126 (77.78%), Query Frame = 2 Query: 185 EVHRISDFFTNCGKIRFYCWDTVGQDKFGGLIDGYYIRGQCAIFMFDVTARLTYNSVPTWHRDLCRVCENIPIVLCGNKVYVNNMSVICLRVTFHRKKNLQYYEIVARAITTLRSLFFTLPENLLG 562 EVH + DFFTNCGKIRFYCWDT GQ+KFGGL DGYYI GQCAI MFDVTARLTY +VPTWHRDLCRVCENIPIVLCGNKV V N V +VTFHRKKNLQYYEI A++ F L L G Sbjct: 49 EVHPL-DFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG 173 HSP 2 Score: 89.3521 bits (220), Expect = 1.767e-69 Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 1 Query: 46 LPNHQTVDYPSFKLVIVGDGGSGKTTFVKRHLTGEFKKKYEPTIGV 183 LP Q VDYPSFKLVIVGDGG+GKTTFVKRHLTGEF+KKYEPTIGV Sbjct: 3 LPGQQAVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGV 48 HSP 3 Score: 80.8777 bits (198), Expect = 6.054e-15 Identity = 37/42 (88.10%), Postives = 41/42 (97.62%), Query Frame = 1 Query: 505 QSNYNFEKPFLYLARELAGDPNLHFDQSPALAPPEVQIDLSA 630 +SNYNFEKPFLYLAR+LAGDPNLHF +SPALAPPEVQIDL+A Sbjct: 155 KSNYNFEKPFLYLARKLAGDPNLHFVESPALAPPEVQIDLAA 196 The following BLAST results are available for this feature:
BLAST of CX297566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 140
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX297566 ID=CX297566; Name=CX297566; organism=Citrus clementina; type=EST; length=631bpback to top |