CX297689

Overview
NameCX297689
Unique NameCX297689
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length763
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX297689_ssr693 microsatellite CX297689_ssr693:693..702. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15173 contig Ccv1_Contig15173:398..1160. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433_TOBAC (14-3-3-like protein OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 4.168e-62
Identity = 120/146 (82.19%), Postives = 127/146 (86.99%), Query Frame = 3
Query:   12 NLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDEVQAES 449
            +++PSSTSGESTVFYYKMKGDYYRYLAEFK  DDRKEAAD SLK          ++L PTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSL+EESYKDSTLIMQLLRDN TLWTSDL EEGGE SKGDE Q E+
Sbjct:  107 HVVPSSTSGESTVFYYKMKGDYYRYLAEFKSGDDRKEAADQSLKAYEAATATASADLAPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKDSTLIMQLLRDNFTLWTSDL-EEGGEHSKGDERQGEN 251          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 14337_SOLLC (14-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 PE=2 SV=2)

HSP 1 Score: 238.039 bits (606), Expect = 4.168e-62
Identity = 120/146 (82.19%), Postives = 128/146 (87.67%), Query Frame = 3
Query:   12 NLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDEVQAES 449
            +L+PSST+GESTVFYYKMKGDYYRYLAEFK  DDRKEA++ SLK          S+L PTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSL+EESYKDSTLIMQLLRDNLTLWTSDL EEGGE SKGDE Q E+
Sbjct:  108 HLVPSSTTGESTVFYYKMKGDYYRYLAEFKAGDDRKEASEQSLKAYEAATATASSDLAPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKDSTLIMQLLRDNLTLWTSDL-EEGGEHSKGDERQGEN 252          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433D_SOYBN (14-3-3-like protein D OS=Glycine max GN=GF14D PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 8.134e-58
Identity = 107/138 (77.54%), Postives = 121/138 (87.68%), Query Frame = 3
Query:   12 NLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSK 425
            +LIPS+ +GESTVFYYKMKGDYYRYLAEFK  +++KEAAD S+K          ++LPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI+ELD+LNEESYKDSTLIMQLLRDNLTLWTSD+PE+G +  K
Sbjct:  110 HLIPSAAAGESTVFYYKMKGDYYRYLAEFKSGNEKKEAADQSMKAYESATAAAEADLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDAQK 247          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433B_VICFA (14-3-3-like protein B OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.062e-57
Identity = 107/140 (76.43%), Postives = 121/140 (86.43%), Query Frame = 3
Query:   12 NLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGD 431
            +LIPS+ +GESTVFYYKMKGDYYRYLAEFK  +++KEA D S+K          +ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI+ELD+LNEESYKDSTLIMQLLRDNLTLWTSD+PE+G +  K +
Sbjct:  110 HLIPSAAAGESTVFYYKMKGDYYRYLAEFKTGNEKKEAGDQSMKAYESATTAAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDSQKAN 249          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 14312_ARATH (14-3-3-like protein GF14 iota OS=Arabidopsis thaliana GN=GRF12 PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.062e-57
Identity = 112/146 (76.71%), Postives = 125/146 (85.62%), Query Frame = 3
Query:   12 NLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQS-KGDEVQAE 446
            +LIP +TSGE+TVFYYKMKGDYYRYLAEFK   +RKEAA+ SLK          +ELP THPIRLGLALNFSVFYYEI+NSPERACHLAKQAFDEAIAELD+L+EESYKDSTLIMQLLRDNLTLWTSDLPE+GGE + K +E + E
Sbjct:  113 HLIPHATSGEATVFYYKMKGDYYRYLAEFKTEQERKEAAEQSLKGYEAATQAASTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDNIKTEESKQE 258          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 1433C_SOYBN (14-3-3-like protein C OS=Glycine max GN=GF14C PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.387e-57
Identity = 111/144 (77.08%), Postives = 124/144 (86.11%), Query Frame = 3
Query:   15 LIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGDEVQAE 446
            LIPSS+SGE +VF+YKMKGDYYRYLAEFK  D+RKEAADHS+K          +EL  THPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI+ELD+L+EESYKDSTLIMQLLRDNLTLWTSD+PE+G EQ K D  +A+
Sbjct:  111 LIPSSSSGEPSVFFYKMKGDYYRYLAEFKSGDERKEAADHSMKAYQLASTTAEAELASTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGEEQ-KVDSARAD 253          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 14339_SOLLC (14-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 PE=2 SV=2)

HSP 1 Score: 219.935 bits (559), Expect = 1.175e-56
Identity = 107/140 (76.43%), Postives = 120/140 (85.71%), Query Frame = 3
Query:   12 NLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGD 431
            +LIPS ++GESTVFY+KMKGDYYRYLAEFK  +D+KE A+ SLK          +EL PTHPIRLGLALNFSVFYYEI+NSPERACHLAKQAFDEAI+ELDSLNE+SYKDSTLIMQLLRDNLTLWTSDLPE+  +  KGD
Sbjct:  110 HLIPSCSAGESTVFYHKMKGDYYRYLAEFKAGNDKKEVAELSLKAYQAATTAAEAELAPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDSLNEDSYKDSTLIMQLLRDNLTLWTSDLPEDAEDAQKGD 249          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 14339_ARATH (14-3-3-like protein GF14 mu OS=Arabidopsis thaliana GN=GRF9 PE=1 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 3.417e-56
Identity = 105/137 (76.64%), Postives = 120/137 (87.59%), Query Frame = 3
Query:   12 NLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQS 422
            +LIPS++ GESTVF+ KMKGDYYRYLAEFK  ++RKEAAD SLK          ++LPPTHPIRLGLALNFSVFYYEI+N+PERACHLAKQAFDEAI+ELD+LNEESYKDSTLIMQLLRDNLTLWTSD+ EEGG+ +
Sbjct:  110 HLIPSASEGESTVFFNKMKGDYYRYLAEFKSGNERKEAADQSLKAYEIATTAAEAKLPPTHPIRLGLALNFSVFYYEIMNAPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDISEEGGDDA 246          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 14338_SOLLC (14-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 PE=2 SV=2)

HSP 1 Score: 218.009 bits (554), Expect = 4.463e-56
Identity = 106/140 (75.71%), Postives = 118/140 (84.29%), Query Frame = 3
Query:   12 NLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKGD 431
            +LIPS T+GESTVFYYKMKGDYYRYLAEFK  DD+KE +D SLK          +ELP THPIRLGLALNFSVFYYEI+NSPERAC LAKQ FDEAI+ELDSLNE++YKD TLI+QLLRDNLTLWTSD+PE+G E  KGD
Sbjct:  110 HLIPSCTAGESTVFYYKMKGDYYRYLAEFKTGDDKKEVSDLSLKAYQTATTTAEAELPITHPIRLGLALNFSVFYYEIMNSPERACQLAKQVFDEAISELDSLNEDNYKDGTLILQLLRDNLTLWTSDIPEDGEEAPKGD 249          
BLAST of CX297689 vs. ExPASy Swiss-Prot
Match: 14310_ARATH (14-3-3-like protein GF14 epsilon OS=Arabidopsis thaliana GN=GRF10 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 8.417e-55
Identity = 110/147 (74.83%), Postives = 121/147 (82.31%), Query Frame = 3
Query:   12 NLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGEQSKG-DEVQAES 449
            +LIPSS + ESTVF+YKMKGDYYRYLAEF    +RKEAAD SL+          + L PTHP+RLGLALNFSVFYYEILNSPE AC LAKQAFD+AIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDL EEG E++KG DE Q E+
Sbjct:  108 HLIPSSNAVESTVFFYKMKGDYYRYLAEFSSGAERKEAADQSLEAYKAAVAAAENGLAPTHPVRLGLALNFSVFYYEILNSPESACQLAKQAFDDAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLNEEGDERTKGADEPQDEN 254          
The following BLAST results are available for this feature:
BLAST of CX297689 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433_TOBAC4.168e-6282.1914-3-3-like protein OS=Nicotiana tabacum PE=2 SV=1[more]
14337_SOLLC4.168e-6282.1914-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 P... [more]
1433D_SOYBN8.134e-5877.5414-3-3-like protein D OS=Glycine max GN=GF14D PE=2... [more]
1433B_VICFA1.062e-5776.4314-3-3-like protein B OS=Vicia faba PE=2 SV=1[more]
14312_ARATH1.062e-5776.7114-3-3-like protein GF14 iota OS=Arabidopsis thali... [more]
1433C_SOYBN1.387e-5777.0814-3-3-like protein C OS=Glycine max GN=GF14C PE=2... [more]
14339_SOLLC1.175e-5676.4314-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 P... [more]
14339_ARATH3.417e-5676.6414-3-3-like protein GF14 mu OS=Arabidopsis thalian... [more]
14338_SOLLC4.463e-5675.7114-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 P... [more]
14310_ARATH8.417e-5574.8314-3-3-like protein GF14 epsilon OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionC06004B11SK RindPdig24 Citrus clementina cDNA clone C06004B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297689 ID=CX297689; Name=CX297689; organism=Citrus clementina; type=EST; length=763bp
GAGGTTGATGAAACCTAATCCCATCCTCCACATCTGGAGAATCAACCGTG
TTTTACTATAAGATGAAAGGAGATTATTACCGTTACCTAGCTGAGTTCAA
AGGTGCTGATGATCGTAAGGAAGCTGCAGATCATTCACTTAAGGCTTACG
AGGCTGCTACAGCTGCAGCAGCCTCAGAGTTACCCCCAACTCATCCAATC
AGACTTGGCCTGGCTCTTAACTTTTCTGTTTTCTACTATGAGATTTTGAA
CTCACCTGAGAGGGCTTGCCACCTGGCTAAACAAGCATTTGATGAGGCGA
TTGCTGAACTTGATAGCCTTAATGAAGAGTCCTACAAGGACAGCACCCTT
ATTATGCAGCTTCTTCGGGATAATCTCACCTTGTGGACCTCGGATCTACC
GGAGGAGGGAGGTGAGCAATCTAAAGGTGATGAAGTTCAAGCAGAGAGCT
AGCCGGGGATGCATGAGCATCAGGAGGAGAAATTGTGCTAGTTGGGTTCT
AATATCTATTAGTATTAGTAGTATAGGGATTGAAAGAACATTTGGCTTGT
ATAATACTTATTACATGTTTTTAATTTCAGGTTGTTGTGCTATTTTCTGT
TTACAAAAAAAAAAGGCCGCTCTTTGTGCTGCAGCTAGAGTATATAAATT
CTGAAAGAGAGTAAGCGACTAAGCGCTATAGAAAAGGACAAAAGAGAGAG
AGGCTGGAGAAATGGCTACTTGCTTGTGGATTCATCCGCATCAGCATCAG
CCTCAGCATCATC
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