CX297690
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297690 vs. ExPASy Swiss-Prot
Match: VA722_ARATH (Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana GN=VAMP722 PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 2.665e-24 Identity = 54/78 (69.23%), Postives = 58/78 (74.36%), Query Frame = 1 Query: 4 QGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMXXXXXXXXXXXXXXXXXXXSVCGGFNC 237 +GVMM+NIEKVLDRGEKIELLVD+TENLRSQAQDFR QGTQMRRKMWFQNM S+CGGFNC Sbjct: 142 KGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTQMRRKMWFQNMKIKLIVLAIIIALILIIILSICGGFNC 219
BLAST of CX297690 vs. ExPASy Swiss-Prot
Match: VA725_ARATH (Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana GN=VAMP725 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 1.910e-22 Identity = 51/78 (65.38%), Postives = 57/78 (73.08%), Query Frame = 1 Query: 4 QGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMXXXXXXXXXXXXXXXXXXXSVCGGFNC 237 +GVMM+NIEKVLDRGEKIELLVD+TENLRSQAQDFR QGT++RRKMWF+NM SVCGGF C Sbjct: 207 KGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKIRRKMWFENMKIKLIVLGIIITLILIIILSVCGGFKC 284
BLAST of CX297690 vs. ExPASy Swiss-Prot
Match: VA721_ARATH (Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana GN=VAMP721 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.112e-21 Identity = 51/78 (65.38%), Postives = 54/78 (69.23%), Query Frame = 1 Query: 4 QGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMXXXXXXXXXXXXXXXXXXXSVCGGFNC 237 +GVMM+NIEKVLDRGEKIELLVD+TENLRSQAQDFR GTQMRRKMW QNM SVC GF C Sbjct: 142 KGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTTGTQMRRKMWLQNMKIKLIVLAIIIALILIIVLSVCHGFKC 219
BLAST of CX297690 vs. ExPASy Swiss-Prot
Match: VA726_ARATH (Putative vesicle-associated membrane protein 726 OS=Arabidopsis thaliana GN=VAMP726 PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 2.758e-21 Identity = 49/78 (62.82%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 4 QGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMXXXXXXXXXXXXXXXXXXXSVCGGFNC 237 +GVMM+NIEKVLDRGEKIELLVD+TENLRSQAQDFR QGT+M+RK+WF+NM SVC GF C Sbjct: 142 KGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKMKRKLWFENMKIKLIVFGIIVALILIIILSVCHGFKC 219
BLAST of CX297690 vs. ExPASy Swiss-Prot
Match: VA727_ARATH (Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana GN=VAMP727 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.416e-17 Identity = 42/78 (53.85%), Postives = 51/78 (65.38%), Query Frame = 1 Query: 4 QGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMXXXXXXXXXXXXXXXXXXXSVCGGFNC 237 +G+MMDNIEKVLDRGEKIELLVD+TENL+ QA F++QG Q+RRKMW Q++ CGGF C Sbjct: 161 KGIMMDNIEKVLDRGEKIELLVDKTENLQFQADSFQRQGRQLRRKMWLQSLQMKLMVAGAVFSFILIVWVVACGGFKC 238
BLAST of CX297690 vs. ExPASy Swiss-Prot
Match: VA724_ARATH (Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana GN=VAMP724 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 7.029e-17 Identity = 37/78 (47.44%), Postives = 53/78 (67.95%), Query Frame = 1 Query: 4 QGVMMDNIEKVLDRGEKIELLVDRTENLRSQAQDFRQQGTQMRRKMWFQNMXXXXXXXXXXXXXXXXXXXSVCGGFNC 237 + +M++NI+K +DRGE + +L D+TENLRSQAQ++++QGTQ+RRK+W+QNM SVC GFNC Sbjct: 143 KSIMLENIDKAIDRGENLTVLTDKTENLRSQAQEYKKQGTQVRRKLWYQNMKIKLVVLGILLLLVLIIWISVCHGFNC 220 The following BLAST results are available for this feature:
BLAST of CX297690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX297690 ID=CX297690; Name=CX297690; organism=Citrus clementina; type=EST; length=409bpback to top |