CX297693

Overview
NameCX297693
Unique NameCX297693
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length754
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig730 contig Ccv1_Contig730:1..754. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.845e-63
Identity = 122/244 (50.00%), Postives = 172/244 (70.49%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            LR+I +S+ FS+  L+A QHLR KK+++L+AY ++   +   +HIG+AAF T+LNL+SNTIFS DL DP   + +EF++    +M ++ K NL D FPVL+ +D QGI+R M  +F K+L +FD+LI++R++  +     E  D+LD  LK+ +D   E +  +IK LFL LF AGTDTTS T+EWAMTELLR P I+SK + ELE+ IGKG+ ++E D+ RLPYL  ++KE  RLHP  PLLL
Sbjct:  123 LRRIVSSNIFSNSSLEAKQHLRSKKVEELIAYCRKAALSNENVHIGRAAFRTSLNLLSNTIFSKDLTDPYEDSGKEFREVITNIMVDSAKTNLVDVFPVLKKIDPQGIKRGMARHFSKVLGIFDQLIEERMRTGR----FEQGDVLDVCLKMMQDNPNEFNHTNIKALFLDLFVAGTDTTSITIEWAMTELLRKPHIMSKAKEELEKVIGKGSIVKEDDVLRLPYLSCIVKEVLRLHPPSPLLL 362          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 5.745e-56
Identity = 110/247 (44.53%), Postives = 170/247 (68.83%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTE---SKDMLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            LRK+  +  FS ++ +A + LR KK+Q+L++++ E+     A+ I +A++ T LN+ISN +FS+DL    SK + EF+ T  G ME AGKP+ +++FP +  LDLQG R+ M     ++  VF   +D ++ ++   ++++   ++D LD+LL + E    E+D NDI+HL L +F AGTDT+SSTLEWAM ELLRNP  + K + E+++ +G+ + ++ESDI+ LPYLQAV+KETFRLHPA PLL+
Sbjct:  134 LRKLSVTLMFSPQRTEATKALRMKKVQELVSFMNESSERKEAVDISRASYTTVLNIISNILFSVDLGSYDSKKSNEFQDTVIGAMEAAGKPDAANYFPFMGFLDLQGNRKAMRGLTERLFRVFRGFMDAKIAEKSLGNYSKDVSNRDFLDSLLILNEGDEAELDNNDIEHLLLDMFTAGTDTSSSTLEWAMAELLRNPKTMVKAQAEMDRVLGQNSVVQESDISGLPYLQAVVKETFRLHPAAPLLV 380          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.415e-54
Identity = 113/249 (45.38%), Postives = 163/249 (65.46%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDM-----LDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            LRK+  +  FS ++++A + LR  K+++L++++ E+     A+ I +A F T LN+ISN +FS+DL +  S  +  F+ T  G+ME  G P+ ++FFP L  LDLQG R+ +     ++  VF   ID +L ++  RD T SKD+     +D LL + E    E++ NDI HL L LF AGTDT SST+EWAM ELLRNP+ + K + E++  IG+   +EESDI+ LPYLQAV+KETFRLHPA PLL+
Sbjct:  134 LRKLSATQLFSPQRIEATKTLRENKVKELVSFMSESSEREEAVDISRATFITALNIISNILFSVDLGNYDSNKSGVFQDTVIGVMEAVGNPDAANFFPFLGFLDLQGNRKTLKACSERLFKVFRGFIDAKLAEKSLRD-TNSKDVRERDFVDVLLDLTEGDEAELNTNDIVHLLLDLFGAGTDTNSSTVEWAMAELLRNPETMVKAQAEIDCVIGQKGVVEESDISALPYLQAVVKETFRLHPAAPLLV 381          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 2.951e-52
Identity = 110/249 (44.18%), Postives = 157/249 (63.05%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAR-EFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESK-----DMLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLL 750
            L+K    +  S + LDA Q LR +K+++L++ V E    G AI + +A+F T+ N+ISN +FS+DLA   S ++  EF  T   + + AG PN+ D+F  +  LDLQG R++  +   K+  VF   ID RL +R  R   E K     DMLD+LL + +    E+ +ND+KHL L +F AGTDT SST+EWAMTEL R+ + + K + E+ Q IG+   ++ESDI  LPYLQA++KET RLHPA PL+
Sbjct:  133 LKKTITKYLLSPQNLDAIQSLRMRKVEELVSLVNEFRERGEAIDLARASFVTSFNIISNALFSVDLATYDSNSSSYEFHNTVVHLTDIAGIPNVGDYFQYMRFLDLQGTRKKAVLCIEKLFRVFQEFIDARLAKRFSRTEKEPKEASSIDMLDSLLDLTQQNEAELTMNDLKHLLLDVFVAGTDTNSSTMEWAMTELFRSTEKMVKAQSEIRQVIGQNGFVQESDIPSLPYLQAIVKETLRLHPAAPLI 381          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.823e-48
Identity = 102/248 (41.13%), Postives = 163/248 (65.73%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTA-REFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTES---KDMLDALLKICEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            LR++  +   S ++++A + LR  K+++L++++ E+     ++ I + AF TTLN+ISN +FS+DL    +K +    + T   +M+ AG P+ +++FP L  LDLQG  +   V   +++ VF   ID ++ ++  ++  +     D +D LL    D+S E+ I+DI+HL L +F AGTDT+SSTLEWAMTELL+NP  ++K + E++  IG+   +EESDI++LPYLQAV+KETFRLH  VPLL+
Sbjct:  134 LRRLSVTQLLSPQRIEATKALRMNKVKELVSFISESSDREESVDISRVAFITTLNIISNILFSVDLGSYNAKASINGVQDTVISVMDAAGTPDAANYFPFLRFLDLQGNVKTFKVCTERLVRVFRGFIDAKIAEKSSQNNPKDVSKNDFVDNLLDYKGDES-ELSISDIEHLLLDMFTAGTDTSSSTLEWAMTELLKNPKTMAKAQAEIDCVIGQNGIVEESDISKLPYLQAVVKETFRLHTPVPLLI 380          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 7.783e-45
Identity = 98/252 (38.89%), Postives = 156/252 (61.90%), Query Frame = 1
Query:   25 RKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRA----GTAIHIGQAAFGTTLNLISNTIFSIDLA-DPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTES-KDMLDALLKI---CEDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            R+IC    F  ++++   ++R++ +  +L   +E   +    G  I + +  F  + N++ N IFS DL  DP SK   EF     G+ME AG PN+SD FP L+  D+QG+R++M    GK  ++  + I++R+++R++ +   S KD+LD L+      +D+  ++  ++I  + L +F AGT+TTSS++EWA+TELLR+P  ++KV+LE+ Q IG     EE DI  LPY+QAVLKE  RLHP +PLL+
Sbjct:   89 RRICTVEMFVHKRINETTNIRQESVDKMLRLDEEKASSSGGGGEGIEVTRYMFLASFNMVGNMIFSKDLVTDPESKQGSEFFNAMIGIMEWAGVPNISDIFPCLKMFDVQGLRKKMERDMGKGKEITKKFIEERIEERKKGEKNRSIKDLLDVLIDFEGSGKDEPDKLSEDEITVIILEMFLAGTETTSSSVEWALTELLRHPQAMAKVKLEILQVIGPNKKFEECDIDSLPYMQAVLKEQLRLHPPLPLLI 340          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.722e-42
Identity = 91/249 (36.55%), Postives = 152/249 (61.04%), Query Frame = 1
Query:   25 RKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRA---GTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKIC---EDKSVEIDINDIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            R+IC    F  +++   + +RRK + ++L ++++   +   G+ I + +  F  + N++ N I S DLAD  S+ A EF      + E +G  N+SD FP L+  DLQ +R++M    GK +++    + +R ++R+ +   + KD LD LL+     +D+  ++  ++IK   L +F AGT+TTSS++EWA+TELLR+P+ ++KV+ E+ Q I      E+SDI  LPY+QAVLKE+ RLHP +P L+
Sbjct:  131 RRICTIEMFVHKKISETEPVRRKCVDNMLKWIEKEANSAEKGSGIEVTRFVFLASFNMLGNLILSKDLADLESEEASEFFIAMKRINEWSGIANVSDIFPFLKKFDLQSLRKKMARDMGKAVEIMSMFLKEREEERK-KGTEKGKDFLDVLLEFQGTGKDEPAKLSEHEIKIFVLEMFLAGTETTSSSVEWALTELLRHPEAMAKVKTEISQAIEPNRKFEDSDIENLPYMQAVLKESLRLHPPLPFLI 378          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.061e-41
Identity = 91/254 (35.83%), Postives = 150/254 (59.06%), Query Frame = 1
Query:    7 DTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFS---IDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEIDIND--IKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            +T +NLRK+C +  F+ + +++  H+R KK ++++ Y+ +  + G  + I +  FGT +N+  N IFS    +L DP S ++ EFK+  W M+E     N +D+FP+L   DL G R+ +      +  ++  ++ +R   ++   +    D +D    +C D      +ND  I  L + LF AGT+T++ST+EWAMTEL +NP I +K+R E++  +G+   ++ESD   LPYL+A +KET RLHP  PLLL
Sbjct:  118 ETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMK--KQGEEVKIVEVIFGTLVNIFGNLIFSQNIFELGDPNSGSS-EFKEYLWRMLELGNSTNPADYFPMLGKFDLFGQRKEVAECLKGIYAIWGAMLQERKLAKKVDGYKSKNDFVD----VCLDSG----LNDYQINALLMELFGAGTETSASTIEWAMTELTKNPKITAKIRSEIQTVVGE-RSVKESDFPNLPYLEATVKETLRLHPPTPLLL 359          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.984e-40
Identity = 91/254 (35.83%), Postives = 149/254 (58.66%), Query Frame = 1
Query:    7 DTVENLRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFS---IDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFTESKDMLDALLKICEDKSVEIDIND--IKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLLL 753
            +T +NLRK+C +  F+ + +++  H+R KK ++++ Y+ +  + G  + I +  FGT +N+  N IFS    +L  P S ++ EFK+  W M+E     N +D+FP+L   DL G R+ +      +  ++  ++ +R   ++   +    D +D    +C D      +ND  I  L + LF AGT+T++ST+EWAMTEL +NP I +K+R EL+  +G+   ++ESD   LPYL+A +KET RLHP  PLLL
Sbjct:  119 ETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMK--KQGEEVKIVEVIFGTLVNIFGNLIFSQNIFELGXPNSGSS-EFKEYLWRMLELGNSTNPADYFPMLGKFDLFGQRKEVAECLKGIYAIWGAMLQERKLAKKVDGYQSKNDFVD----VCLDSG----LNDYQINALLMELFGAGTETSASTIEWAMTELTKNPKITAKLRSELQTVVGE-RSVKESDFPNLPYLEATVKETLRLHPPTPLLL 360          
BLAST of CX297693 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.886e-39
Identity = 94/253 (37.15%), Postives = 137/253 (54.15%), Query Frame = 1
Query:   22 LRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFGTTLNLISNTIFSIDLADPTSKTAREFKQTNWGMMEEAGKPNLSDFFPVLENLDLQGIRRRMTVYFGKMLDVFDRLIDQRLKQRQERDFT--------ESKDMLDALLKICEDKSVEIDIN--DIKHLFLVLFAAGTDTTSSTLEWAMTELLRNPDILSKVRLELEQTIGKGNPIEESDITRLPYLQAVLKETFRLHPAVPLL 750
            ++K+C S       LD    +R+ + +  +  V +   +G A+  G      + N++S  I S            E ++      E +GK N+SDF   L+  DLQG  +R+     K+ D FD ++D+ +KQR+E            E KDMLD L  I ED+S EI +N  +IK   L +  AGTDT++ T+EWAM EL+ NP +L K R E++  +GK   +EESDI  LPYLQ +++ET RLHPA PLL
Sbjct:  127 MKKLCMSELLGGHMLDQFLPVRQXETKKFIKRVLQKGISGEAVDFGGEFITLSNNIVSRMIVSQTSTTEDENEVEEMRKLVKDAAELSGKFNISDFVSFLKRFDLQGFNKRLE----KIRDCFDTVLDRIIKQREEERRNKNETVGKREFKDMLDVLFDISEDESSEIKLNKENIKAFILDILIAGTDTSAVTMEWAMAELINNPGVLEKARQEMDAVVGKSRIVEESDIANLPYLQGIVRETLRLHPAGPLL 375          
The following BLAST results are available for this feature:
BLAST of CX297693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
C76B1_HELTU2.845e-6350.007-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C76C4_ARATH5.745e-5644.53Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C76C2_ARATH1.415e-5445.38Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C76C3_ARATH2.951e-5244.18Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C76C1_ARATH9.823e-4841.13Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C76A1_SOLME7.783e-4538.89Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
C76A2_SOLME4.722e-4236.55Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C80B1_ESCCA3.061e-4135.83(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C80B2_ESCCA1.984e-4035.83(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C93A3_SOYBN4.886e-3937.15Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC06004C03SK RindPdig24 Citrus clementina cDNA clone C06004C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297693 ID=CX297693; Name=CX297693; organism=Citrus clementina; type=EST; length=754bp
GAGGGCGACACTGTGGAGAATCTTCGAAAAATATGCAACTCACATGCTTT
CTCTAGTCGCCAACTCGATGCCAATCAGCACCTTCGGCGTAAGAAAATCC
AAGATCTTCTAGCTTATGTCCAAGAAAATTGCCGTGCAGGTACAGCAATA
CATATTGGCCAAGCTGCTTTCGGCACTACGCTTAATTTGATATCCAACAC
AATTTTTTCTATTGACTTGGCTGATCCCACATCAAAAACTGCGCGAGAGT
TTAAGCAAACAAATTGGGGTATGATGGAAGAAGCTGGAAAGCCTAACTTG
TCCGATTTTTTTCCTGTGCTTGAGAATCTTGACTTGCAAGGTATAAGGCG
TCGCATGACAGTTTATTTTGGCAAGATGCTCGATGTATTTGATCGCTTGA
TTGATCAACGATTGAAGCAAAGACAAGAACGAGATTTCACCGAATCCAAA
GATATGTTAGATGCTCTTCTCAAAATTTGTGAAGACAAAAGCGTGGAGAT
TGATATAAATGATATCAAACACTTGTTTCTGGTTTTGTTTGCTGCGGGGA
CTGATACTACTTCGAGTACATTGGAATGGGCAATGACAGAACTACTTCGC
AACCCAGATATTTTATCAAAAGTCCGATTAGAGTTAGAACAAACGATTGG
CAAAGGCAATCCAATTGAGGAATCAGACATCACCCGCTTACCTTATCTAC
AAGCAGTACTCAAAGAAACCTTCAGGTTGCACCCGGCAGTTCCTCTTTTA
CTTC
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