CX297701

Overview
NameCX297701
Unique NameCX297701
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15071 contig Ccv1_Contig15071:539..1249. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX297701 vs. ExPASy Swiss-Prot
Match: NCB5R_USTMA (NADH-cytochrome b5 reductase 1 OS=Ustilago maydis GN=CBR1 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.420e-29
Identity = 60/98 (61.22%), Postives = 73/98 (74.49%), Query Frame = 3
Query:   15 IREPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGY 308
            ++ P DKT++  IYANV   DILLK+ELD  A K+ DQF I Y LN+ PE W GGVGFV+KE ++ + P PA+DI+VL CGPPPM KAM  HLEALGY
Sbjct:  211 LKNPADKTQIDFIYANVKETDILLKDELDELALKHKDQFRISYFLNEAPEGWKGGVGFVTKEALEKNLPKPANDIKVLMCGPPPMIKAMTGHLEALGY 308          
BLAST of CX297701 vs. ExPASy Swiss-Prot
Match: NCB5R_DICDI (NADH-cytochrome b5 reductase 1 OS=Dictyostelium discoideum GN=cyb5r1 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.423e-29
Identity = 56/106 (52.83%), Postives = 77/106 (72.64%), Query Frame = 3
Query:   15 IREPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGYTSEMLFQF 332
            ++ P+DKT++ L++ N+T EDILLK+ELD  A K+P QF +YYVLN PP+ W  GVGFVSKE+I++  P+P+    V+ CGPP MNKAM  HLE +G+    +F F
Sbjct:  182 LKNPSDKTEISLVFGNITEEDILLKKELDELAEKHP-QFKVYYVLNNPPKGWTQGVGFVSKEIIESRLPSPSDQTMVIMCGPPMMNKAMTGHLETIGFNESNIFTF 286          
BLAST of CX297701 vs. ExPASy Swiss-Prot
Match: NCB5R_NEOFI (NADH-cytochrome b5 reductase 1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=cbr1 PE=3 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 3.164e-29
Identity = 62/95 (65.26%), Postives = 73/95 (76.84%), Query Frame = 3
Query:   27 NDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGYT 311
            ND TK+ LI+ANV  +DILLKEELD  AA+ PD F IYYVLN PP+ W GGVGFV+ EMI+ H PAPASD+++L CGPPPM  AM    E+LGYT
Sbjct:  201 NDTTKLDLIFANVNPDDILLKEELDKLAAEDPD-FNIYYVLNNPPQGWTGGVGFVTPEMIKEHLPAPASDVKILLCGPPPMISAMKKATESLGYT 294          
BLAST of CX297701 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPFU (NADH-cytochrome b5 reductase 1 OS=Aspergillus fumigatus GN=cbr1 PE=3 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 4.133e-29
Identity = 62/95 (65.26%), Postives = 73/95 (76.84%), Query Frame = 3
Query:   27 NDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGYT 311
            ND TK+ LI+ANV  +DILLKEELD  AA+ PD F IYYVLN PP+ W GGVGFV+ EMI+ H PAPASD+++L CGPPPM  AM    E+LGYT
Sbjct:  201 NDTTKLDLIFANVNPDDILLKEELDMLAAEDPD-FNIYYVLNNPPQGWTGGVGFVTPEMIKEHLPAPASDVKILLCGPPPMISAMKKATESLGYT 294          
BLAST of CX297701 vs. ExPASy Swiss-Prot
Match: NCB5R_MORAP (NADH-cytochrome b5 reductase 1 OS=Mortierella alpina GN=CBR1 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.018e-27
Identity = 58/98 (59.18%), Postives = 74/98 (75.51%), Query Frame = 3
Query:   15 IREPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGY 308
            ++ P DKT+V+ I+ANVT EDI+LK ELD  + K+P QF +YYVLN  PE W GGVGFV+ +MI+ H PAPA+DI+VL CGPPPM  AM+   + LGY
Sbjct:  186 VKNPEDKTQVNFIFANVTEEDIILKAELDLLSQKHP-QFKVYYVLNNAPEGWTGGVGFVNADMIKEHMPAPAADIKVLLCGPPPMVSAMSKITQDLGY 282          
BLAST of CX297701 vs. ExPASy Swiss-Prot
Match: NCB5R_CANAL (NADH-cytochrome b5 reductase 1 OS=Candida albicans GN=CBR1 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.018e-27
Identity = 55/98 (56.12%), Postives = 71/98 (72.45%), Query Frame = 3
Query:   15 IREPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGY 308
            ++ P DKTK+HL+YANVT  DILLKEELD FAA++PD+  I+YVLN+ P +W G VGFV+ E+I TH P  ++D  +L CGPPPM  AM      LG+
Sbjct:  181 LKNPEDKTKIHLVYANVTESDILLKEELDNFAARHPDRLKIHYVLNEAPANWQGSVGFVTPEIIDTHLPKASNDTNLLLCGPPPMVSAMKKAAVELGF 278          
BLAST of CX297701 vs. ExPASy Swiss-Prot
Match: NCB5R_DEBHA (NADH-cytochrome b5 reductase 1 OS=Debaryomyces hansenii GN=CBR1 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.598e-27
Identity = 56/98 (57.14%), Postives = 69/98 (70.41%), Query Frame = 3
Query:   15 IREPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGY 308
            +R P DKTKV L+YANVT +DILLKEEL+  A ++PD+F IYYVLN PPE+W GGVGFV+ E++  H P  +    +L CGPPPM  AM      LGY
Sbjct:  171 LRNPEDKTKVSLVYANVTEDDILLKEELNKMAREHPDRFKIYYVLNTPPENWTGGVGFVTPEIMDKHLPKASEATNLLLCGPPPMISAMKKAAVGLGY 268          
BLAST of CX297701 vs. ExPASy Swiss-Prot
Match: NCB5R_COCIM (NADH-cytochrome b5 reductase 1 OS=Coccidioides immitis GN=CBR1 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.617e-27
Identity = 60/94 (63.83%), Postives = 69/94 (73.40%), Query Frame = 3
Query:   27 NDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGY 308
            ND T++ LI+ANV  +DILLKEELD  A K  D F IYYVLN PPE WNGGVGFV+ +MI+   PAPA DI+VL CGPPPM  AM    E+LGY
Sbjct:  200 NDTTQIDLIFANVNPDDILLKEELDQLA-KEDDAFRIYYVLNNPPEKWNGGVGFVTPDMIKAKLPAPAGDIKVLICGPPPMVSAMKKATESLGY 292          
BLAST of CX297701 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPCL (NADH-cytochrome b5 reductase 1 OS=Aspergillus clavatus GN=cbr1 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.617e-27
Identity = 61/94 (64.89%), Postives = 70/94 (74.47%), Query Frame = 3
Query:   30 DKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGYT 311
            D TKV LI+ANV  EDILLKEELD  AA+  D F IYYVLN PP+ W GGVGFV+ EMI+   PAPASD++VL CGPPPM  AM    E+LG+T
Sbjct:  202 DITKVDLIFANVNPEDILLKEELDKLAAEDED-FNIYYVLNNPPQGWTGGVGFVTPEMIKERLPAPASDVKVLLCGPPPMISAMKKATESLGFT 294          
BLAST of CX297701 vs. ExPASy Swiss-Prot
Match: NCB5R_EMENI (NADH-cytochrome b5 reductase 1 OS=Emericella nidulans GN=cbr1 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.470e-26
Identity = 59/95 (62.11%), Postives = 71/95 (74.74%), Query Frame = 3
Query:   27 NDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGYT 311
            ND T+V LI+ANV  +DILLK+EL+  AA+  D F IYYVLN PPE W GGVGFV+ +MI+   PAPASDI++L CGPPPM  AM    E+LGYT
Sbjct:  205 NDTTQVDLIFANVNPDDILLKDELEKLAAE-DDGFRIYYVLNNPPEGWTGGVGFVTPDMIKERLPAPASDIKILLCGPPPMVSAMKKATESLGYT 298          
The following BLAST results are available for this feature:
BLAST of CX297701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
NCB5R_USTMA1.420e-2961.22NADH-cytochrome b5 reductase 1 OS=Ustilago maydis ... [more]
NCB5R_DICDI2.423e-2952.83NADH-cytochrome b5 reductase 1 OS=Dictyostelium di... [more]
NCB5R_NEOFI3.164e-2965.26NADH-cytochrome b5 reductase 1 OS=Neosartorya fisc... [more]
NCB5R_ASPFU4.133e-2965.26NADH-cytochrome b5 reductase 1 OS=Aspergillus fumi... [more]
NCB5R_MORAP1.018e-2759.18NADH-cytochrome b5 reductase 1 OS=Mortierella alpi... [more]
NCB5R_CANAL1.018e-2756.12NADH-cytochrome b5 reductase 1 OS=Candida albicans... [more]
NCB5R_DEBHA6.598e-2757.14NADH-cytochrome b5 reductase 1 OS=Debaryomyces han... [more]
NCB5R_COCIM8.617e-2763.83NADH-cytochrome b5 reductase 1 OS=Coccidioides imm... [more]
NCB5R_ASPCL8.617e-2764.89NADH-cytochrome b5 reductase 1 OS=Aspergillus clav... [more]
NCB5R_EMENI1.470e-2662.11NADH-cytochrome b5 reductase 1 OS=Emericella nidul... [more]

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Properties
Property NameValue
Genbank descriptionC06004C11SK RindPdig24 Citrus clementina cDNA clone C06004C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297701 ID=CX297701; Name=CX297701; organism=Citrus clementina; type=EST; length=711bp
GAGGCTAGAGCCATATTAGAGAACCAAATGACAAGACAAAGGTGCACCTC
ATTTATGCCAATGTTACATATGAGGACATTCTTTTAAAGGAAGAATTGGA
TGGATTTGCGGCGAAGTACCCTGATCAATTCACAATCTACTATGTGTTGA
ATCAGCCTCCTGAATCGTGGAATGGTGGTGTTGGCTTTGTCTCAAAGGAA
ATGATTCAAACCCATTGTCCCGCACCTGCTTCTGATATTCAGGTTCTGAG
ATGTGGTCCACCACCAATGAACAAGGCCATGGCTGCTCACCTCGAGGCAC
TTGGATATACTTCAGAAATGCTGTTCCAGTTCTAATCACTTCCATAAGGT
TGTCCAATTATTTGGACTGATATTCGTCACTCCTATTCGGTCCACATAAA
GAACTTTTTTACATCTCTTTTAAGCTGTATTTTGTTTCTCCTGTGACTAA
AGAAGCCGATGAAACCGGAGCATGGATTTTGTAATTGATCTTTTGCTTTA
ACCTATAAAAACAAATCTCCATGAGGTTTTTCAAATTAGGGATTTGTAGT
GCTATAGCTTGGAAACTGTAGAAAATAGGTTACAATAACCTAAATCAGGG
CAAGATTGGCCCTGATAGCCATTACCAATTATTGCACCATTGATACTTGA
AAATTTGTTGATGGCAAGATAATACTTTGATGACCTTAAAAAAAAAAAAA
AAAAAAAAAAA
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