CX297860
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297860 vs. ExPASy Swiss-Prot
Match: IRE1_CAEEL (Serine/threonine-protein kinase/endoribonuclease ire-1 OS=Caenorhabditis elegans GN=ire-1 PE=2 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 1.973e-33 Identity = 70/148 (47.30%), Postives = 101/148 (68.24%), Query Frame = 3 Query: 12 RPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKYVTND 455 R A VLNHPFFWT++ RL++ DVSDRVE E E +S ++R +E A + + G W EK+ E++ ++R YK +VRDLLR +RNK +H+RELP+D+++ LG P+ F +YF+ RFP+LL+ VY YC GE VF +Y ++D Sbjct: 766 RLTADAVLNHPFFWTSEKRLAYFSDVSDRVEKE--EDNSPVVRRIETDARIVVCGGWREKICDALKEDLRKFRTYKSFSVRDLLRAMRNKKHHYRELPEDVRQSLGDIPDQFLHYFTSRFPRLLLHVYKAT-EYCSGEAVFKRYYSDD 910
BLAST of CX297860 vs. ExPASy Swiss-Prot
Match: IRE1_YEAST (Serine/threonine-protein kinase/endoribonuclease IRE1 OS=Saccharomyces cerevisiae GN=IRE1 PE=1 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 9.163e-31 Identity = 63/146 (43.15%), Postives = 92/146 (63.01%), Query Frame = 3 Query: 12 RPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSKLLRALE-GIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKYV 446 RP A VL HP FW +L FL VSDR+E+E+R+ S LL + G V +G W K + F++N+ RYR+Y + DLLR +RNK +HF +LP+DI EL+G P+GFY+YF+ RFP LLI VY ++ +++ +++ Sbjct: 968 RPTAMKVLRHPLFWPKSKKLEFLLKVSDRLEIENRDPPSALLMKFDAGSDFVIPSGDWTVKFDKTFMDNLERYRKYHSSKLMDLLRALRNKYHHFMDLPEDIAELMGPVPDGFYDYFTKRFPNLLIGVYMIVKENLSDDQILREFL 1113
BLAST of CX297860 vs. ExPASy Swiss-Prot
Match: PPK4_SCHPO (Serine/threonine-protein kinase ppk4 OS=Schizosaccharomyces pombe GN=ppk4 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.911e-28 Identity = 56/145 (38.62%), Postives = 91/145 (62.76%), Query Frame = 3 Query: 12 RPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKYV 446 RP + VLNHP FW +L FL DVSDR E+E+R+ S LL+ LE + + W + + ++N+G+YR+Y + D+LRV+RNK +H+++LP+ ++ +LG P+GF +YF +FP LL+ Y+++ E F +Y+ Sbjct: 926 RPTIEVVLNHPLFWDYAKKLDFLIDVSDRFEVEERDPPSPLLQMLENNSKSVIGENWTTCLHSSLVDNLGKYRKYDGSKILDILRVLRNKRHHYQDLPESVRRVLGDLPDGFTSYFVEKFPMLLLHCYHLVKDVLYEESQFKRYL 1070
BLAST of CX297860 vs. ExPASy Swiss-Prot
Match: ERN1_MOUSE (Serine/threonine-protein kinase/endoribonuclease IRE1 OS=Mus musculus GN=Ern1 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.617e-27 Identity = 61/144 (42.36%), Postives = 87/144 (60.42%), Query Frame = 3 Query: 12 RPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKY 443 RP A++VL HPFFW+ + +L F +DVSDR+E E D ++R LE + W E + ++ ++R YK +VRDLLR +RNK +H+RELP ++QE LGS P+ F YF+ RFP LL Y + C+ E +F Y Sbjct: 820 RPSAKHVLKHPFFWSLEKQLQFFQDVSDRIEKE--ALDGPIVRQLERGGRAVVKMDWRENITVPLQTDLRKFRTYKGGSVRDLLRAMRNKKHHYRELPVEVQETLGSIPDDFVRYFTSRFPHLLSHTYQAM-ELCRHERLFQTY 960
BLAST of CX297860 vs. ExPASy Swiss-Prot
Match: ERN1_HUMAN (Serine/threonine-protein kinase/endoribonuclease IRE1 OS=Homo sapiens GN=ERN1 PE=1 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 1.788e-26 Identity = 59/144 (40.97%), Postives = 86/144 (59.72%), Query Frame = 3 Query: 12 RPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKY 443 RP A++VL HPFFW+ + +L F +DVSDR+E E D +++ LE + W E + ++ ++R YK +VRDLLR +RNK +H+RELP +++E LGS P+ F YF+ RFP LL Y + C E +F Y Sbjct: 820 RPSAKHVLKHPFFWSLEKQLQFFQDVSDRIEKESL--DGPIVKQLERGGRAVVKMDWRENITVPLQTDLRKFRTYKGGSVRDLLRAMRNKKHHYRELPAEVRETLGSLPDDFVCYFTSRFPHLLAHTYRAM-ELCSHERLFQPY 960
BLAST of CX297860 vs. ExPASy Swiss-Prot
Match: ERN2_HUMAN (Serine/threonine-protein kinase/endoribonuclease IRE2 OS=Homo sapiens GN=ERN2 PE=1 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 3.050e-26 Identity = 59/148 (39.86%), Postives = 87/148 (58.78%), Query Frame = 3 Query: 12 RPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKYVTND 455 RP A VL HPFFW+ +L F +DVSD +E E + L+RALE + W E + ++ ++R YK +VRDLLR +RNK +H+RELP ++++ LG P+GF YF+ RFP+LL+ + + + C E +F Y D Sbjct: 769 RPSAPQVLAHPFFWSRAKQLQFFQDVSDWLEKESEQEP--LVRALEAGGCAVVRDNWHEHISMPLQTDLRKFRSYKGTSVRDLLRAVRNKKHHYRELPVEVRQALGQVPDGFVQYFTNRFPRLLLHTHRAMRS-CASESLFLPYYPPD 913
BLAST of CX297860 vs. ExPASy Swiss-Prot
Match: IREA_DICDI (Probable serine/threonine-protein kinase ireA OS=Dictyostelium discoideum GN=ireA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 8.875e-26 Identity = 61/144 (42.36%), Postives = 82/144 (56.94%), Query Frame = 3 Query: 12 RPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKY 443 RP +NHPFFW +LSFL SD +E E S L + +G W K++ I+NIGRYR+Y ++RDLLRVIRNK NH+R+L + Q LG P+GF+NYF +FP+L I Y I K ++ F +Y Sbjct: 839 RPDIGECINHPFFWEVHKKLSFLVAASDYLEFEKPTSPLNLEIDSHVDLVTDGSGDWWLKIDQVLIDNIGRYRKYNGKSIRDLLRVIRNKFNHYRDLSPEEQTCLGILPDGFFNYFDLKFPQLFIVTYLFILKNLKNDQYFVQY 982
BLAST of CX297860 vs. ExPASy Swiss-Prot
Match: ERN2_MOUSE (Serine/threonine-protein kinase/endoribonuclease IRE2 OS=Mus musculus GN=Ern2 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.157e-23 Identity = 57/144 (39.58%), Postives = 83/144 (57.64%), Query Frame = 3 Query: 12 RPKAQNVLNHPFFWTADTRLSFLRDVSDRVELEDRESDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKY 443 RP A VL HP FW+ L F +DVSD +E E + L+ ALE + + W + + ++ R+R YK +VRDLLR +RNK +H+RELP ++++ LG P GF YF+ RFP+LL+ + + T C E +F Y Sbjct: 756 RPSAGWVLAHPLFWSRAKELQFFQDVSDWLEKEPDQGP--LVSALEAGSYKVVREDWHKHISAPLQADLKRFRSYKGTSVRDLLRAMRNKKHHYRELPAEVRQTLGQLPAGFIQYFTQRFPRLLLHTHRAMRT-CASESLFLPY 896 The following BLAST results are available for this feature:
BLAST of CX297860 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX297860 ID=CX297860; Name=CX297860; organism=Citrus clementina; type=EST; length=598bpback to top |