CX297884

Overview
NameCX297884
Unique NameCX297884
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13871 contig Ccv1_Contig13871:335..1050. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX297884 vs. ExPASy Swiss-Prot
Match: ANM1_ORYSJ (Probable protein arginine N-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=PRMT1 PE=2 SV=1)

HSP 1 Score: 425.246 bits (1092), Expect = 1.642e-118
Identity = 205/234 (87.61%), Postives = 222/234 (94.87%), Query Frame = 1
Query:   13 AHFGIHEEMLKDVLRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAEYKDDKIEFWNNVYGFDMSCIKKQAMMEPLVDTVDQNQIVTNCQLLKTMDISKMGPXDASFTAPFKLVAQRNDYIHALVAYFDVT 714
            +HFGIHEEMLKDV+RTKSYQNVI QN FLFKDK+VLDVGAGTGILSLFCAKAGA HVYA+ECSQMA+MAK+IV+ NG+SNVITV+KGK+EEIELPV KVD+IISEWMGYFLLFENMLNTVLYARDKWL D G+VLPDKASL+LTAIEDAEYK+DKIEFWNNVYGFDM CIKKQAMMEPLVDTVD NQIVTNCQLLKTMDISKM P DASFT PFKLVA+RNDYIHALVAYF+V+
Sbjct:   74 SHFGIHEEMLKDVVRTKSYQNVITQNSFLFKDKIVLDVGAGTGILSLFCAKAGAKHVYAIECSQMADMAKEIVKTNGYSNVITVIKGKVEEIELPVPKVDVIISEWMGYFLLFENMLNTVLYARDKWLADGGVVLPDKASLHLTAIEDAEYKEDKIEFWNNVYGFDMRCIKKQAMMEPLVDTVDANQIVTNCQLLKTMDISKMTPGDASFTVPFKLVAERNDYIHALVAYFNVS 307          
BLAST of CX297884 vs. ExPASy Swiss-Prot
Match: ANM1_ORYSI (Probable protein arginine N-methyltransferase 1 OS=Oryza sativa subsp. indica GN=PRMT1 PE=2 SV=1)

HSP 1 Score: 425.246 bits (1092), Expect = 1.642e-118
Identity = 205/234 (87.61%), Postives = 222/234 (94.87%), Query Frame = 1
Query:   13 AHFGIHEEMLKDVLRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAEYKDDKIEFWNNVYGFDMSCIKKQAMMEPLVDTVDQNQIVTNCQLLKTMDISKMGPXDASFTAPFKLVAQRNDYIHALVAYFDVT 714
            +HFGIHEEMLKDV+RTKSYQNVI QN FLFKDK+VLDVGAGTGILSLFCAKAGA HVYA+ECSQMA+MAK+IV+ NG+SNVITV+KGK+EEIELPV KVD+IISEWMGYFLLFENMLNTVLYARDKWL D G+VLPDKASL+LTAIEDAEYK+DKIEFWNNVYGFDM CIKKQAMMEPLVDTVD NQIVTNCQLLKTMDISKM P DASFT PFKLVA+RNDYIHALVAYF+V+
Sbjct:   74 SHFGIHEEMLKDVVRTKSYQNVITQNSFLFKDKIVLDVGAGTGILSLFCAKAGAKHVYAIECSQMADMAKEIVKTNGYSNVITVIKGKVEEIELPVPKVDVIISEWMGYFLLFENMLNTVLYARDKWLADGGVVLPDKASLHLTAIEDAEYKEDKIEFWNNVYGFDMRCIKKQAMMEPLVDTVDANQIVTNCQLLKTMDISKMTPGDASFTVPFKLVAERNDYIHALVAYFNVS 307          
BLAST of CX297884 vs. ExPASy Swiss-Prot
Match: ANM11_ARATH (Probable protein arginine N-methyltransferase 1.1 OS=Arabidopsis thaliana GN=PRMT1.1 PE=1 SV=1)

HSP 1 Score: 421.009 bits (1081), Expect = 3.097e-117
Identity = 205/234 (87.61%), Postives = 226/234 (96.58%), Query Frame = 1
Query:   13 AHFGIHEEMLKDVLRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAEYKDDKIEFWNNVYGFDMSCIKKQAMMEPLVDTVDQNQIVTNCQLLKTMDISKMGPXDASFTAPFKLVAQRNDYIHALVAYFDVT 714
            +HFGIHEEMLKDV+RTK+YQNVIYQNKFL KDK+VLDVGAGTGILSLFCAKAGAAHVYAVECSQMA+MAK+IV+ANGFS+VITVLKGKIEEIELP  KVD+IISEWMGYFLLFENML++VLYARDKWLV+ G+VLPDKASL+LTAIED+EYK+DKIEFWN+VYGFDMSCIKK+AMMEPLVDTVDQNQIVT+ +LLKTMDISKM   DASFTAPFKLVAQRNDYIHALVAYFDV+
Sbjct:   77 SHFGIHEEMLKDVVRTKTYQNVIYQNKFLIKDKIVLDVGAGTGILSLFCAKAGAAHVYAVECSQMADMAKEIVKANGFSDVITVLKGKIEEIELPTPKVDVIISEWMGYFLLFENMLDSVLYARDKWLVEGGVVLPDKASLHLTAIEDSEYKEDKIEFWNSVYGFDMSCIKKKAMMEPLVDTVDQNQIVTDSRLLKTMDISKMSSGDASFTAPFKLVAQRNDYIHALVAYFDVS 310          
BLAST of CX297884 vs. ExPASy Swiss-Prot
Match: ANM12_ARATH (Probable protein arginine N-methyltransferase 1.2 OS=Arabidopsis thaliana GN=PRMT1.2 PE=1 SV=1)

HSP 1 Score: 406.757 bits (1044), Expect = 6.044e-113
Identity = 198/234 (84.62%), Postives = 223/234 (95.30%), Query Frame = 1
Query:   13 AHFGIHEEMLKDVLRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAEYKDDKIEFWNNVYGFDMSCIKKQAMMEPLVDTVDQNQIVTNCQLLKTMDISKMGPXDASFTAPFKLVAQRNDYIHALVAYFDVT 714
            +HFGIHEEMLKDV+RTKSYQ+VIY+NKFL KDK+VLDVGAGTGILSLFCAKAGAAHVYAVECSQMA+ AK+IV++NGFS+VITVLKGKIEEIELPV KVD+IISEWMGYFLL+ENML+TVLYAR+KWLVD GIVLPDKASLY+TAIEDA YKDDK+EFW++VYGFDMSCIK++A+ EPLVDTVD NQIVT+ +LLKTMDISKM   DASFTAPFKLVAQRND+IHALVAYFDV+
Sbjct:   53 SHFGIHEEMLKDVVRTKSYQDVIYKNKFLIKDKIVLDVGAGTGILSLFCAKAGAAHVYAVECSQMADTAKEIVKSNGFSDVITVLKGKIEEIELPVPKVDVIISEWMGYFLLYENMLDTVLYARNKWLVDGGIVLPDKASLYVTAIEDAHYKDDKVEFWDDVYGFDMSCIKRRAITEPLVDTVDGNQIVTDSKLLKTMDISKMAAGDASFTAPFKLVAQRNDHIHALVAYFDVS 286          
BLAST of CX297884 vs. ExPASy Swiss-Prot
Match: ANM1_HUMAN (Protein arginine N-methyltransferase 1 OS=Homo sapiens GN=PRMT1 PE=1 SV=2)

HSP 1 Score: 314.694 bits (805), Expect = 3.126e-85
Identity = 148/233 (63.52%), Postives = 188/233 (80.69%), Query Frame = 1
Query:   13 AHFGIHEEMLKDVLRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAEYKDDKIEFWNNVYGFDMSCIKKQAMMEPLVDTVDQNQIVTNCQLLKTMDISKMGPXDASFTAPFKLVAQRNDYIHALVAYFDV 711
            AHFGIHEEMLKD +RT +Y+N ++ N+ LFKDKVVLDVG+GTGIL +F AKAGA  V  +ECS +++ A +IV+AN   +V+T++KGK+EE+ELPV KVDIIISEWMGY L +E+MLNTVLYARDKWL  DG++ PD+A+LY+TAIED +YKD KI +W NVYGFDMSCIK  A+ EPLVD VD  Q+VTN  L+K +DI  +   D +FT+PF L  +RNDY+HALVAYF++
Sbjct:   48 AHFGIHEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVLYARDKWLAPDGLIFPDRATLYVTAIEDRQYKDYKIHWWENVYGFDMSCIKDVAIKEPLVDVVDPKQLVTNACLIKEVDIYTVKVEDLTFTSPFCLQVKRNDYVHALVAYFNI 280          
BLAST of CX297884 vs. ExPASy Swiss-Prot
Match: ANM1_XENTR (Protein arginine N-methyltransferase 1 OS=Xenopus tropicalis GN=prmt1 PE=2 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 5.331e-85
Identity = 148/233 (63.52%), Postives = 188/233 (80.69%), Query Frame = 1
Query:   13 AHFGIHEEMLKDVLRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAEYKDDKIEFWNNVYGFDMSCIKKQAMMEPLVDTVDQNQIVTNCQLLKTMDISKMGPXDASFTAPFKLVAQRNDYIHALVAYFDV 711
            AHFGIHEEMLKD +RT +Y+N ++ N+ LFKDKVVLDVG+GTGIL +F AKAGA  V  +ECS +++ A +IV+AN   +V+T++KGK+EE+ELPV KVDIIISEWMGY L +E+MLNTV+YARDKWL  DG++ PD+A+LY+TAIED +YKD KI +W NVYGFDMSCIK  A+ EPLVD VD  Q+VTN  L+K +DI  +   D +FT+PF L  +RNDYIHALVAYF++
Sbjct:   38 AHFGIHEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAIKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVIYARDKWLTPDGLIFPDRATLYVTAIEDRQYKDYKIHWWENVYGFDMSCIKDVAIKEPLVDVVDPKQLVTNACLIKEVDIYTVKVDDLTFTSPFCLQVKRNDYIHALVAYFNI 270          
BLAST of CX297884 vs. ExPASy Swiss-Prot
Match: ANM1A_XENLA (Protein arginine N-methyltransferase 1-A OS=Xenopus laevis GN=prmt1-A PE=1 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 5.331e-85
Identity = 148/233 (63.52%), Postives = 188/233 (80.69%), Query Frame = 1
Query:   13 AHFGIHEEMLKDVLRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAEYKDDKIEFWNNVYGFDMSCIKKQAMMEPLVDTVDQNQIVTNCQLLKTMDISKMGPXDASFTAPFKLVAQRNDYIHALVAYFDV 711
            AHFGIHEEMLKD +RT +Y+N ++ N+ LFKDKVVLDVG+GTGIL +F AKAGA  V  +ECS +++ A +IV+AN   +V+T++KGK+EE+ELPV KVDIIISEWMGY L +E+MLNTV+YARDKWL  DG++ PD+A+LY+TAIED +YKD KI +W NVYGFDMSCIK  A+ EPLVD VD  Q+V+N  L+K +DI  +   D SFT+PF L  +RNDYIHALVAYF++
Sbjct:   56 AHFGIHEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGAKKVIGIECSSISDYAIKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVIYARDKWLTPDGLIFPDRATLYITAIEDRQYKDYKIHWWENVYGFDMSCIKDVAIKEPLVDVVDPKQLVSNACLIKEVDIYTVKVDDLSFTSPFCLQVKRNDYIHALVAYFNI 288          
BLAST of CX297884 vs. ExPASy Swiss-Prot
Match: ANM1_RAT (Protein arginine N-methyltransferase 1 OS=Rattus norvegicus GN=Prmt1 PE=1 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.188e-84
Identity = 147/233 (63.09%), Postives = 188/233 (80.69%), Query Frame = 1
Query:   13 AHFGIHEEMLKDVLRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAEYKDDKIEFWNNVYGFDMSCIKKQAMMEPLVDTVDQNQIVTNCQLLKTMDISKMGPXDASFTAPFKLVAQRNDYIHALVAYFDV 711
            AHFGIHEEMLKD +RT +Y+N ++ N+ LFKDKVVLDVG+GTGIL +F AKAGA  V  +ECS +++ A +IV+AN   +V+T++KGK+EE+ELPV KVDIIISEWMGY L +E+MLNTVL+ARDKWL  DG++ PD+A+LY+TAIED +YKD KI +W NVYGFDMSCIK  A+ EPLVD VD  Q+VTN  L+K +DI  +   D +FT+PF L  +RNDY+HALVAYF++
Sbjct:   40 AHFGIHEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDRATLYVTAIEDRQYKDYKIHWWENVYGFDMSCIKDVAIKEPLVDVVDPKQLVTNACLIKEVDIYTVKVEDLTFTSPFCLQVKRNDYVHALVAYFNI 272          
BLAST of CX297884 vs. ExPASy Swiss-Prot
Match: ANM1_MOUSE (Protein arginine N-methyltransferase 1 OS=Mus musculus GN=Prmt1 PE=1 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.188e-84
Identity = 147/233 (63.09%), Postives = 188/233 (80.69%), Query Frame = 1
Query:   13 AHFGIHEEMLKDVLRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAEYKDDKIEFWNNVYGFDMSCIKKQAMMEPLVDTVDQNQIVTNCQLLKTMDISKMGPXDASFTAPFKLVAQRNDYIHALVAYFDV 711
            AHFGIHEEMLKD +RT +Y+N ++ N+ LFKDKVVLDVG+GTGIL +F AKAGA  V  +ECS +++ A +IV+AN   +V+T++KGK+EE+ELPV KVDIIISEWMGY L +E+MLNTVL+ARDKWL  DG++ PD+A+LY+TAIED +YKD KI +W NVYGFDMSCIK  A+ EPLVD VD  Q+VTN  L+K +DI  +   D +FT+PF L  +RNDY+HALVAYF++
Sbjct:   58 AHFGIHEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDRATLYVTAIEDRQYKDYKIHWWENVYGFDMSCIKDVAIKEPLVDVVDPKQLVTNACLIKEVDIYTVKVEDLTFTSPFCLQVKRNDYVHALVAYFNI 290          
BLAST of CX297884 vs. ExPASy Swiss-Prot
Match: ANM8_DANRE (Protein arginine N-methyltransferase 8 OS=Danio rerio GN=prmt8 PE=2 SV=2)

HSP 1 Score: 312.383 bits (799), Expect = 1.551e-84
Identity = 146/233 (62.66%), Postives = 186/233 (79.83%), Query Frame = 1
Query:   13 AHFGIHEEMLKDVLRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAEYKDDKIEFWNNVYGFDMSCIKKQAMMEPLVDTVDQNQIVTNCQLLKTMDISKMGPXDASFTAPFKLVAQRNDYIHALVAYFDV 711
            AHFGIHEEMLKD +RT +Y+N +Y NK +FKDK+VLDVG+GTGILS+F AKAGA HVY +ECS ++  +++I+++N   +VIT+LKGK+EE ELPV +VDIIISEWMGY L +E+MLNTV+YARDKWL   G + PD+A+LY+ AIED +YKD KI +W NVYGFDM+CI+  AMMEPLVD VD  Q+VTN  L+K +DI  +   D SFT+ F L  QRNDY+HALV YF++
Sbjct:  106 AHFGIHEEMLKDEVRTLTYRNSMYHNKHIFKDKIVLDVGSGTGILSMFAAKAGAKHVYGIECSSISEYSEKIIKSNHLDSVITILKGKVEETELPVDQVDIIISEWMGYCLFYESMLNTVIYARDKWLKPGGFMFPDRATLYVVAIEDRQYKDFKIHWWENVYGFDMTCIRNVAMMEPLVDIVDPKQVVTNSCLVKEVDIYTVKTEDLSFTSAFCLQIQRNDYVHALVTYFNI 338          
The following BLAST results are available for this feature:
BLAST of CX297884 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
ANM1_ORYSJ1.642e-11887.61Probable protein arginine N-methyltransferase 1 OS... [more]
ANM1_ORYSI1.642e-11887.61Probable protein arginine N-methyltransferase 1 OS... [more]
ANM11_ARATH3.097e-11787.61Probable protein arginine N-methyltransferase 1.1 ... [more]
ANM12_ARATH6.044e-11384.62Probable protein arginine N-methyltransferase 1.2 ... [more]
ANM1_HUMAN3.126e-8563.52Protein arginine N-methyltransferase 1 OS=Homo sap... [more]
ANM1_XENTR5.331e-8563.52Protein arginine N-methyltransferase 1 OS=Xenopus ... [more]
ANM1A_XENLA5.331e-8563.52Protein arginine N-methyltransferase 1-A OS=Xenopu... [more]
ANM1_RAT1.188e-8463.09Protein arginine N-methyltransferase 1 OS=Rattus n... [more]
ANM1_MOUSE1.188e-8463.09Protein arginine N-methyltransferase 1 OS=Mus musc... [more]
ANM8_DANRE1.551e-8462.66Protein arginine N-methyltransferase 8 OS=Danio re... [more]

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Properties
Property NameValue
Genbank descriptionC06006C06SK RindPdig24 Citrus clementina cDNA clone C06006C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX297884 ID=CX297884; Name=CX297884; organism=Citrus clementina; type=EST; length=716bp
GATTCGGCCGAGGCTCACTTTGGTATTCATGAAGAAATGCTAAAGGATGT
ACTGAGAACTAAGTCATATCAAAATGTTATTTATCAGAACAAGTTTCTTT
TCAAGGACAAAGTAGTTCTTGATGTTGGAGCCGGGACTGGAATTTTATCC
TTATTTTGTGCAAAAGCAGGGGCAGCTCATGTTTATGCAGTTGAGTGCTC
CCAAATGGCTAACATGGCTAAACAGATTGTCGAAGCAAATGGATTTTCTA
ATGTTATAACAGTTTTAAAAGGGAAGATTGAAGAAATTGAGCTCCCAGTT
ACAAAAGTGGATATAATTATTTCAGAGTGGATGGGTTATTTTTTGTTGTT
CGAGAACATGCTAAATACAGTCTTGTATGCTCGTGATAAATGGCTAGTTG
ATGATGGAATTGTGTTACCAGATAAAGCTTCTCTCTATTTGACAGCCATT
GAAGATGCTGAGTACAAAGATGACAAGATTGAATTTTGGAATAACGTCTA
TGGCTTTGACATGAGCTGCATCAAGAAGCAAGCTATGATGGAACCTCTTG
TTGACACAGTTGATCAGAATCAAATTGTTACCAACTGCCAGCTACTCAAG
ACAATGGATATCTCCAAGATGGGACCTGNGGATGCTTCCTTTACAGCTCC
ATTTAAGCTTGTGGCACAACGTAATGATTACATCCATGCTCTTGTAGCAT
ATTTTGACGTAACCTT
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