CX297885
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297885 vs. ExPASy Swiss-Prot
Match: NIFU2_ARATH (NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=NIFU2 PE=1 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 7.033e-72 Identity = 150/221 (67.87%), Postives = 171/221 (77.38%), Query Frame = 1 Query: 34 MQGVVLNPT-YSR-PHQTLDSPSCSRPASKSTKSFFGERVS--LTRWRNPVRHSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVAIDEPIVKVRITGPAAGVMTVRVAVTQ 684 MQ + LNP SR P Q +D S S + +R + R NP+R R L R+ R V+KAVATPD +E+PLT EN+ESVLDEIRPYL+SDGGNVALHEIDGN+VR+KLQGACGSCPSS MTMKMGIERRLMEKIPEIVAVE++ DEETGLELNEENIEKVLEEIRPYL+G A GSL+LV I++PIVK+RITGPAAGVMTVRVAVTQ Sbjct: 1 MQLLTLNPAAISRTPPQAIDPSSSSSLLLPFPQILSSQRALGLVARPCNPLRRGLSRFLSSRQL-FRRSKVVKAVATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEETGLELNEENIEKVLEEIRPYLIGTADGSLDLVEIEDPIVKIRITGPAAGVMTVRVAVTQ 220
BLAST of CX297885 vs. ExPASy Swiss-Prot
Match: NIFU1_ORYSJ (NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=NIFU1 PE=1 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 9.228e-56 Identity = 120/209 (57.42%), Postives = 149/209 (71.29%), Query Frame = 1 Query: 76 QTLDSPSCSRPA---SKSTKSFFGERVSLTRWRNPVRHSSCRLLLIRKRGAARRN-VIKAVA--TPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVAIDEPIVKVRITGPAAGVMTVRVAVTQ 684 QT P + A S +T S +V+ W + SS L+ R V+ A+A P +A++LPLTA N+ESVLD++RPYL +DGG+VALHEI GNVVRLKLQGACGSCPSS++T+K GIERRLMEKIP++ AVE V D+ETGLELNEEN+EKVL EIRPYL G GG L+ + I PIVKVR+TGPAA V TVR+AV++ Sbjct: 2 QTTTVPMAAAAAVAPSTTTSSSASFKVAAYAWSSCRSSSSPATRLVAAPNHQRPPLVVGAIAGLDPVTAVQLPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLITIKRGIERRLMEKIPDVAAVEPVTDKETGLELNEENVEKVLNEIRPYLAGTGGGGLQFLMIKGPIVKVRLTGPAAVVRTVRIAVSK 210
BLAST of CX297885 vs. ExPASy Swiss-Prot
Match: NIFU3_ARATH (NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=NIFU3 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.352e-51 Identity = 103/139 (74.10%), Postives = 118/139 (84.89%), Query Frame = 1 Query: 271 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEET-GLELNEENIEKVLEEIRPYLVGAAGGSLELVAIDEPIVKVRITGPAAGVMTVRVAVTQ 684 +PLT EN+E VLDE+RP L++DGGNVALHEIDG VV LKLQGACGSCPSS MT+KMGIE RL +KIPEI++VE + ET GLELN+ENIEKVL E+RPYL G GG LELV ID +VKVR+TGPAAGVMTVRVA+TQ Sbjct: 82 MPLTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRLRDKIPEIMSVEQFLESETGGLELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVKVRLTGPAAGVMTVRVALTQ 220
BLAST of CX297885 vs. ExPASy Swiss-Prot
Match: NIFU1_ARATH (NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=NIFU1 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.638e-21 Identity = 58/143 (40.56%), Postives = 89/143 (62.24%), Query Frame = 1 Query: 259 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVA-VESVADEETGLELNEENIEKVLEEIRPYLVGAAGGSLELVAIDEPIVKVRITGPAAGVMTVRVAVTQ 684 SA LT +N++ VL+++RP+LISDGGNV + ++ VV LKLQGAC SCPSS TM MGIER L EK + + + V DEE ++ E + L+ +RP + GGS+E+++++ V+ GP + M ++ A+ + Sbjct: 79 SAQTFDLTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVLKEKFGDALKDIRQVFDEEV-KQITVEAVNAHLDILRP-AIKNYGGSVEVLSVEGEDCVVKYVGPESIGMGIQAAIKE 219
BLAST of CX297885 vs. ExPASy Swiss-Prot
Match: YUTI_BACSU (Putative nitrogen fixation protein yutI OS=Bacillus subtilis GN=yutI PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.103e-16 Identity = 37/70 (52.86%), Postives = 55/70 (78.57%), Query Frame = 1 Query: 286 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 495 E ++ VLD++RP+L+ DGG+ L ++D +V+L+L GACGSCPSS +T+K GIER L+E++P +V VE V Sbjct: 41 EQVQEVLDKLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERALLEEVPGVVEVEQV 110
BLAST of CX297885 vs. ExPASy Swiss-Prot
Match: NIFU_ANASL (Nitrogen fixation protein nifU (Fragment) OS=Anabaena sp. (strain L31) GN=nifU PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.903e-15 Identity = 38/69 (55.07%), Postives = 55/69 (79.71%), Query Frame = 1 Query: 292 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 495 I+ VLDE +RP LI+DGG+V L+++DG++V++ LQGACGSCPSS T+K+ IE RL ++I + VE+V Sbjct: 44 IQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCPSSTATLKIAIESRLRDRINPSLVVEAV 112
BLAST of CX297885 vs. ExPASy Swiss-Prot
Match: NIFU_ANASP (Nitrogen fixation protein nifU OS=Anabaena sp. (strain PCC 7120) GN=nifU PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14 Identity = 43/91 (47.25%), Postives = 62/91 (68.13%), Query Frame = 1 Query: 238 KAVATPDSAIELPLTAEN----IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 495 K P+S + PLT I+ VLDE +RP LI+DGG+V L+++DG++V++ LQGACGSC SS T+K+ IE RL ++I + VE+V Sbjct: 210 KPTNIPNSGQKRPLTNVQKIALIQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDRINPSLVVEAV 300
BLAST of CX297885 vs. ExPASy Swiss-Prot
Match: NIFU_ANAAZ (Nitrogen fixation protein nifU OS=Anabaena azollae GN=nifU PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.348e-14 Identity = 43/91 (47.25%), Postives = 62/91 (68.13%), Query Frame = 1 Query: 238 KAVATPDSAIELPLTAEN----IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 495 K P+S + PLT I+ VLDE +RP LI+DGG+V L+++DG++V++ LQGACGSC SS T+K+ IE RL ++I + VE+V Sbjct: 210 KPTNIPNSGQKRPLTNVQKIALIQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDRINPSLVVEAV 300
BLAST of CX297885 vs. ExPASy Swiss-Prot
Match: NFU1_DROME (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila melanogaster GN=CG32500 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.336e-13 Identity = 40/96 (41.67%), Postives = 61/96 (63.54%), Query Frame = 1 Query: 280 TAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADE-ETGLELNEENIEKVLEEIR 561 T I+ +LD IRP + DGG++ +G VV+LK+QG+C SCPSS++T+K G++ L IPE+ +VE V DE + +E E EK L+ ++ Sbjct: 178 TVMMIKELLDTRIRPTVQEDGGDIVFMGYEGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDEADRMIESEFERFEKNLKTLK 273
BLAST of CX297885 vs. ExPASy Swiss-Prot
Match: NFU1_DROPE (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila persimilis GN=GL13432 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.262e-12 Identity = 43/107 (40.19%), Postives = 63/107 (58.88%), Query Frame = 1 Query: 280 TAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELNE-ENIEKVLEEIRP--YLVGAAGG 588 T I+ +LD IRP + DGG++ + VV+LK+QG+C SCPSS++T+K G++ L IPE+ +VE V D+ + E E EK L++ P VG GG Sbjct: 174 TVMMIKELLDTRIRPTVQEDGGDIVFISYENGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDDADRMADKEFERFEKNLKQKEPAGAPVGIGGG 280 The following BLAST results are available for this feature:
BLAST of CX297885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX297885 ID=CX297885; Name=CX297885; organism=Citrus clementina; type=EST; length=730bpback to top |