CX297888
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297888 vs. ExPASy Swiss-Prot
Match: GAT25_ARATH (GATA transcription factor 25 OS=Arabidopsis thaliana GN=TIFY2A PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 6.459e-54 Identity = 107/168 (63.69%), Postives = 122/168 (72.62%), Query Frame = 1 Query: 4 SAEGTPQRLSVPQRLASLXXXXXXXXXXXXXXXXXYTVRKEVALRMQRNKGQFTSAKSNNEDSASAVSSWGSNQSWAGDVNGSQNQDIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKGTLRDLSKAAPQAGQTSSLNKNEENGTLKAEQV-IRAAGNINGS 504 S GTPQR S+PQRLASL YTVRKEVALRMQRNKGQFTSAKSNN+++ASA SSWGSNQ+WA + + +Q+Q+I CRHCGI EKSTPMMRRGP GPRTLCNACGLMWANKG RDLSKA+PQ Q LNKNE+ Q+ I A +I+ S Sbjct: 134 SLPGTPQRFSIPQRLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQFTSAKSNNDEAASAGSSWGSNQTWAIESSEAQHQEISCRHCGIGEKSTPMMRRGPAGPRTLCNACGLMWANKGAFRDLSKASPQTAQNLPLNKNEDANLETDHQIMITVANDISNS 301
BLAST of CX297888 vs. ExPASy Swiss-Prot
Match: GAT27_ARATH (GATA transcription factor 27 OS=Arabidopsis thaliana GN=TIFY2B PE=2 SV=2) HSP 1 Score: 207.994 bits (528), Expect = 4.187e-53 Identity = 106/165 (64.24%), Postives = 122/165 (73.94%), Query Frame = 1 Query: 13 GTPQRLSVPQRLASLXXXXXXXXXXXXXXXXXYTVRKEVALRMQRNKGQFTSAKSNNEDSASAVSSWGSNQSWAGDVNGSQNQDIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKGTLRDLSKA-APQAGQTSSLNKNEENGTLKAEQVIRAAGNINGS 504 GTPQRLSVPQRLASL YTVRKEVALRMQR KGQFTSAKS+N+DS S S WGSNQSWA + +Q +++CRHCG SEKSTPMMRRGP+GPRTLCNACGLMWANKGTLRDLSK PQ Q SLNKNE+ L+A+Q++ G+I+ + Sbjct: 133 GTPQRLSVPQRLASLLRFREKRKGRNFDKTIRYTVRKEVALRMQRKKGQFTSAKSSNDDSGSTGSDWGSNQSWAVEGTETQKPEVLCRHCGTSEKSTPMMRRGPDGPRTLCNACGLMWANKGTLRDLSKVPPPQTPQHLSLNKNED-ANLEADQMMEVTGDISNT 296
BLAST of CX297888 vs. ExPASy Swiss-Prot
Match: GAT26_ARATH (GATA transcription factor 26 OS=Arabidopsis thaliana GN=TIFY1 PE=2 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 2.092e-28 Identity = 77/158 (48.73%), Postives = 93/158 (58.86%), Query Frame = 1 Query: 25 RLSVPQRLASLXXXXXXXXXXXXXXXXXYTVRKEVALRMQRNKGQFTSAKSNNEDSASAVSSWGSNQSWAGDVNGSQNQDIVCRHCGISEKSTPMMRRGPEGPRTLCNACGLMWANKGTLRDLSKAAPQAGQTSSLNKNEENGTLKAEQVIRAAGNIN 498 R S+PQR SL Y VR+EVALRM RNKGQFTS+K + A +S G++Q A D + +I C HCGIS K TPMMRRGP GPRTLCNACGL WAN+GTLRDLSK + +L K ++ G+ V AA N+N Sbjct: 140 RCSLPQRAQSLDRFRKKRNARCFEKKVRYGVRQEVALRMARNKGQFTSSKMTD----GAYNS-GTDQDSAQD---DAHPEISCTHCGISSKCTPMMRRGPSGPRTLCNACGLFWANRGTLRDLSKKTEE--NQLALMKPDDGGS-----VADAANNLN 282 The following BLAST results are available for this feature:
BLAST of CX297888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX297888 ID=CX297888; Name=CX297888; organism=Citrus clementina; type=EST; length=722bpback to top |