CX297907
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX297907 vs. ExPASy Swiss-Prot
Match: RS25_NEUCR (40S ribosomal protein S25 OS=Neurospora crassa GN=rps-25 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.001e-26 Identity = 61/96 (63.54%), Postives = 71/96 (73.96%), Query Frame = 3 Query: 21 MAPAATXXXXXXXXXXXXXXXXXAQHAVVLDKATNDKLQKDVQSYRLITVATLVDRLKINGSLARQALNDLEANGQIKKVVGHSSLSIYTRAVTAE 308 MAPAA+ AQHAV+LDK+T+DKL KDVQSYRL+TVATLVDRLKINGSLAR+ L DLE GQIK+VVGHS + IYTRA+ A+ Sbjct: 1 MAPAASGAKKQKKKWSKGKVKDKAQHAVILDKSTSDKLYKDVQSYRLVTVATLVDRLKINGSLARRCLKDLEEKGQIKQVVGHSKMKIYTRAIGAD 96
BLAST of CX297907 vs. ExPASy Swiss-Prot
Match: RS25B_YEAST (40S ribosomal protein S25-B OS=Saccharomyces cerevisiae GN=RPS25B PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.545e-14 Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 3 Query: 90 AQHAVVLDKATNDKLQKDVQSYRLITVATLVDRLKINGSLARQALNDLEANGQIKKVVGHSSLSIYTRAVTAE 308 AQHAV+LD+ D++ K+V +YR ++V+ LVDRLKI GSLAR AL LE G IK + HS +IYTRA +E Sbjct: 36 AQHAVILDQEKYDRILKEVPTYRYVSVSVLVDRLKIGGSLARIALRHLEKEGIIKPISKHSKQAIYTRAAASE 108
BLAST of CX297907 vs. ExPASy Swiss-Prot
Match: RS25A_YEAST (40S ribosomal protein S25-A OS=Saccharomyces cerevisiae GN=RPS25A PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.545e-14 Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 3 Query: 90 AQHAVVLDKATNDKLQKDVQSYRLITVATLVDRLKINGSLARQALNDLEANGQIKKVVGHSSLSIYTRAVTAE 308 AQHAV+LD+ D++ K+V +YR ++V+ LVDRLKI GSLAR AL LE G IK + HS +IYTRA +E Sbjct: 36 AQHAVILDQEKYDRILKEVPTYRYVSVSVLVDRLKIGGSLARIALRHLEKEGIIKPISKHSKQAIYTRATASE 108
BLAST of CX297907 vs. ExPASy Swiss-Prot
Match: RS25_ASHGO (40S ribosomal protein S25 OS=Ashbya gossypii GN=RPS25 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.635e-14 Identity = 39/73 (53.42%), Postives = 52/73 (71.23%), Query Frame = 3 Query: 90 AQHAVVLDKATNDKLQKDVQSYRLITVATLVDRLKINGSLARQALNDLEANGQIKKVVGHSSLSIYTRAVTAE 308 AQHAV+LD+ D++ K+V +YR ++V+ LVDRLKI GS+AR AL LE G IK + HS +IYTRA +E Sbjct: 36 AQHAVILDQDKLDRILKEVPTYRYVSVSVLVDRLKIGGSMARVALRHLETEGIIKPISKHSKQAIYTRATASE 108
BLAST of CX297907 vs. ExPASy Swiss-Prot
Match: RS25B_SCHPO (40S ribosomal protein S25-B OS=Schizosaccharomyces pombe GN=rps25b PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 4.495e-14 Identity = 38/72 (52.78%), Postives = 52/72 (72.22%), Query Frame = 3 Query: 90 AQHAVVLDKATNDKLQKDVQSYRLITVATLVDRLKINGSLARQALNDLEANGQIKKVVGHSSLSIYTRAVTA 305 AQHA V DK+ D++ K+V +++ I+V+ LVDR+KINGSLAR A+ DL G I+KV HS +IYTRA + Sbjct: 16 AQHATVFDKSIIDRINKEVPAFKFISVSVLVDRMKINGSLARIAIRDLAERGVIQKVDQHSKQAIYTRAAAS 87
BLAST of CX297907 vs. ExPASy Swiss-Prot
Match: RS25A_SCHPO (40S ribosomal protein S25-A OS=Schizosaccharomyces pombe GN=rps25a PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.001e-13 Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 3 Query: 90 AQHAVVLDKATNDKLQKDVQSYRLITVATLVDRLKINGSLARQALNDLEANGQIKKVVGHSSLSIYTRAVTA 305 AQHA V DK+ D++ K+V +++ I+V+ LVDR+KINGSLAR A+ DL G I+KV HS +IYTR A Sbjct: 16 AQHATVFDKSIIDRINKEVPAFKFISVSVLVDRMKINGSLARIAIRDLAERGVIQKVDQHSKQAIYTRVPAA 87
BLAST of CX297907 vs. ExPASy Swiss-Prot
Match: RS25_CANGA (40S ribosomal protein S25 OS=Candida glabrata GN=RPS25 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.308e-13 Identity = 38/69 (55.07%), Postives = 50/69 (72.46%), Query Frame = 3 Query: 90 AQHAVVLDKATNDKLQKDVQSYRLITVATLVDRLKINGSLARQALNDLEANGQIKKVVGHSSLSIYTRA 296 AQHAV+LD+ D++ K+V +YR ++V+ LVDRLKI GS+AR AL LE G IK + HS +IYTRA Sbjct: 36 AQHAVILDQEKFDRILKEVPTYRYVSVSVLVDRLKIGGSMARVALRHLEREGIIKPISKHSKQAIYTRA 104
BLAST of CX297907 vs. ExPASy Swiss-Prot
Match: RS25_BRABE (40S ribosomal protein S25 OS=Branchiostoma belcheri GN=RPS25 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.889e-12 Identity = 38/65 (58.46%), Postives = 47/65 (72.31%), Query Frame = 3 Query: 102 VVLDKATNDKLQKDVQSYRLITVATLVDRLKINGSLARQALNDLEANGQIKKVVGHSSLSIYTRA 296 V+ DKAT DKL K+V SY+LIT + + +RLKI GSLAR AL +L + G IK V HS+ IYTRA Sbjct: 44 VLFDKATYDKLYKEVPSYKLITPSVVSERLKIRGSLARAALKELHSKGMIKLVSKHSAQVIYTRA 108
BLAST of CX297907 vs. ExPASy Swiss-Prot
Match: RS25_SOLLC (40S ribosomal protein S25 OS=Solanum lycopersicum GN=RPS25 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.177e-12 Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 3 Query: 102 VVLDKATNDKLQKDVQSYRLITVATLVDRLKINGSLARQALNDLEANGQIKKVVGHSSLSIYTRA 296 V+ DK+T DKL + Y+LIT + L DRL+I+GSLAR+A+ DL A G I+ V H+S IYTRA Sbjct: 41 VLFDKSTYDKLLSEAPKYKLITPSVLSDRLRISGSLARKAIRDLMARGSIRMVSAHASQQIYTRA 105
BLAST of CX297907 vs. ExPASy Swiss-Prot
Match: RS25_DROME (40S ribosomal protein S25 OS=Drosophila melanogaster GN=RpS25 PE=3 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 1.224e-11 Identity = 36/69 (52.17%), Postives = 49/69 (71.01%), Query Frame = 3 Query: 102 VVLDKATNDKLQKDVQSYRLITVATLVDRLKINGSLARQALNDLEANGQIKKVVGHSSLSIYTRAVTAE 308 V+ DKAT +KL K+V +Y+LIT + + +RLKI GSLA++AL +L G IK+VV H S IYTRA + Sbjct: 47 VLFDKATYEKLYKEVPAYKLITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQHHSQVIYTRATKGD 115 The following BLAST results are available for this feature:
BLAST of CX297907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CX297907 ID=CX297907; Name=CX297907; organism=Citrus clementina; type=EST; length=526bpback to top |