CX298065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX298065 vs. ExPASy Swiss-Prot
Match: RL5_CUCSA (60S ribosomal protein L5 OS=Cucumis sativus GN=RPL5 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 4.078e-30 Identity = 64/78 (82.05%), Postives = 68/78 (87.18%), Query Frame = 2 Query: 2 MEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVERLKALN 235 MEDEPEKYQSHF EYIK+GIEAD LE LYKKVHAAIRA+P KKS+K P HKRYNLKKLTY+ERKARLVERL ALN Sbjct: 211 MEDEPEKYQSHFSEYIKKGIEADELEGLYKKVHAAIRANPIAKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALN 288
BLAST of CX298065 vs. ExPASy Swiss-Prot
Match: RL5_SOLME (60S ribosomal protein L5 (Fragment) OS=Solanum melongena GN=RPL5 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.024e-29 Identity = 59/78 (75.64%), Postives = 67/78 (85.90%), Query Frame = 2 Query: 2 MEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVERLKALN 235 MEDEPEKYQSHF YIK + DN+EE+YKKVHAAIR DP+ KKS+K+PP HKRYNLKKLTYEERKA+L+ERL ALN Sbjct: 30 MEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVHAAIRPDPSPKKSQKQPPKTHKRYNLKKLTYEERKAKLIERLNALN 107
BLAST of CX298065 vs. ExPASy Swiss-Prot
Match: RL52_ARATH (60S ribosomal protein L5-2 OS=Arabidopsis thaliana GN=RPL5B PE=2 SV=3) HSP 1 Score: 126.716 bits (317), Expect = 5.889e-29 Identity = 57/77 (74.03%), Postives = 69/77 (89.61%), Query Frame = 2 Query: 5 EDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVERLKALN 235 EDEPEK Q+HF YIK+G+EA+++EE+YKKVHAAIRA+PN KK+EK P EHKRYNLKKLTYEERK +L+ER+KALN Sbjct: 212 EDEPEKLQTHFSAYIKKGVEAESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALN 288
BLAST of CX298065 vs. ExPASy Swiss-Prot
Match: RL52_ORYSJ (60S ribosomal protein L5-2 OS=Oryza sativa subsp. japonica GN=RPL5B PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 2.923e-28 Identity = 58/77 (75.32%), Postives = 66/77 (85.71%), Query Frame = 2 Query: 5 EDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVERLKALN 235 E+EPEK+Q+HF EY+K+GI+AD +E LYKKVHAAIRADP KS KK PA HKRYNLKKLTYE+RKA LVERL ALN Sbjct: 213 EEEPEKFQAHFSEYLKKGIDADGMESLYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALN 289
BLAST of CX298065 vs. ExPASy Swiss-Prot
Match: RL51_ARATH (60S ribosomal protein L5-1 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 2.923e-28 Identity = 57/77 (74.03%), Postives = 68/77 (88.31%), Query Frame = 2 Query: 5 EDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVERLKALN 235 EDEPEK Q+HF YIK+G+EA+++EELYKKVHAAIRADPN KK+ K P +HKRYNLKKLTYEERK +L+ER+KALN Sbjct: 212 EDEPEKLQTHFSAYIKKGVEAESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALN 288
BLAST of CX298065 vs. ExPASy Swiss-Prot
Match: RL51_ORYSJ (60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica GN=RPL5A PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 3.817e-28 Identity = 58/77 (75.32%), Postives = 66/77 (85.71%), Query Frame = 2 Query: 5 EDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVERLKALN 235 E+EPEK+Q+HF EY+K+GI+AD +E LYKKVHAAIRADP KS KK PA HKRYNLKKLTYE+RKA LVERL ALN Sbjct: 213 EEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALN 289
BLAST of CX298065 vs. ExPASy Swiss-Prot
Match: RL51_ORYSI (60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica GN=RPL5A PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 3.817e-28 Identity = 58/77 (75.32%), Postives = 66/77 (85.71%), Query Frame = 2 Query: 5 EDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVERLKALN 235 E+EPEK+Q+HF EY+K+GI+AD +E LYKKVHAAIRADP KS KK PA HKRYNLKKLTYE+RKA LVERL ALN Sbjct: 213 EEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALN 289
BLAST of CX298065 vs. ExPASy Swiss-Prot
Match: RL5_LYSTE (60S ribosomal protein L5 OS=Lysiphlebus testaceipes GN=RpL5 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 6.988e-14 Identity = 39/75 (52.00%), Postives = 51/75 (68.00%), Query Frame = 2 Query: 5 EDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPAEHKRYNLKKLTYEERKARLVERLKA 229 E+EPE +Q F +YIK GI AD +EE+YKK H AIRADP++ + K KR+N KLT ERK R V+++KA Sbjct: 213 ENEPENFQRQFSQYIKNGITADGIEEMYKKAHEAIRADPDRAEIVKTKEPVKKRWNRAKLTLSERKDR-VKQIKA 286
BLAST of CX298065 vs. ExPASy Swiss-Prot
Match: RL5_BOMMO (60S ribosomal protein L5 OS=Bombyx mori GN=RpL5 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.009e-12 Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 2 Query: 5 EDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSE-KKPPAEHKRYNLKKLTYEERKARLVER 220 +D+ + ++ F +YIK G+ AD +E +YKK H AIRADP+ KK E KK + KR+N +KLT ERK R+ ++ Sbjct: 213 QDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQK 285
BLAST of CX298065 vs. ExPASy Swiss-Prot
Match: RL5_DROME (60S ribosomal protein L5 OS=Drosophila melanogaster GN=RpL5 PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 2.936e-12 Identity = 35/70 (50.00%), Postives = 47/70 (67.14%), Query Frame = 2 Query: 5 EDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQKKSEKKPPA-EHKRYNLKKLTYEERKARL 211 E++ E ++ F YIK GI AD+LE++YKK H AIR DP K + KK A KR+N KKLT E+RK ++ Sbjct: 213 EEDEESFKRQFSRYIKLGIRADDLEDIYKKAHQAIRNDPTHKVTAKKSSAVTKKRWNAKKLTNEQRKTKI 282 The following BLAST results are available for this feature:
BLAST of CX298065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298065 ID=CX298065; Name=CX298065; organism=Citrus clementina; type=EST; length=503bpback to top |