CX298097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: KNAT7_ARATH (Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7 PE=1 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.855e-52 Identity = 96/105 (91.43%), Postives = 102/105 (97.14%), Query Frame = 2 Query: 2 ALTERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 316 +L ERVRQELK+ELKQGFKSRIEDVREEI+RKRRAGKLPGDTT+VLKNWWQQH KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWH+NS S+TSLKSKRK Sbjct: 186 SLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSHSLTSLKSKRK 290
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: HD1_BRANA (Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.855e-52 Identity = 96/105 (91.43%), Postives = 102/105 (97.14%), Query Frame = 2 Query: 2 ALTERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 316 +L ERVRQELK+ELKQGFKSRIEDVREEI+RKRRAGKLPGDTT+VLKNWWQQH KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWH+NS S+TSLKSKRK Sbjct: 189 SLMERVRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSHSLTSLKSKRK 293
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: KNOS3_ORYSJ (Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica GN=HOS66 PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 2.678e-51 Identity = 97/106 (91.51%), Postives = 102/106 (96.23%), Query Frame = 2 Query: 2 ALTERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR 319 +L ERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTT++LK WWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWH+NSQ+ T LKSKRKR Sbjct: 210 SLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNNSQTST-LKSKRKR 314
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: KNAP3_MALDO (Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.064e-47 Identity = 88/106 (83.02%), Postives = 96/106 (90.57%), Query Frame = 2 Query: 2 ALTERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR 319 +L ERVRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTTSVLK WWQ HSKWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWHSN + T LKSKRKR Sbjct: 322 SLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSTVLKSKRKR 427
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: KNAT3_ARATH (Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3 PE=1 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.164e-46 Identity = 87/105 (82.86%), Postives = 95/105 (90.48%), Query Frame = 2 Query: 2 ALTERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 316 +L ERVRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTTSVLK WWQ HSKWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWHSN S T LK+KRK Sbjct: 314 SLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTVLKNKRK 418
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: KNAT4_ARATH (Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana GN=KNAT4 PE=1 SV=3) HSP 1 Score: 184.111 bits (466), Expect = 5.779e-46 Identity = 85/105 (80.95%), Postives = 95/105 (90.48%), Query Frame = 2 Query: 2 ALTERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 316 +L ERVRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTTSVLK+WWQ HSKWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWHSN S T K+KR+ Sbjct: 278 SLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTVSKNKRR 382
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: KNOSD_ORYSJ (Homeobox protein knotted-1-like 13 OS=Oryza sativa subsp. japonica GN=OSH45 PE=2 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 7.548e-46 Identity = 84/105 (80.00%), Postives = 95/105 (90.48%), Query Frame = 2 Query: 2 ALTERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRK 316 +L ERVRQELK ELKQG+K ++ D+REEILRKRRAGKLPGDTTS LK WWQ H+KWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWHSN S TS+K+KRK Sbjct: 262 SLMERVRQELKHELKQGYKEKLIDIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSSSTSVKTKRK 366
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: KNOX1_MAIZE (Homeobox protein knotted-1-like 1 (Fragment) OS=Zea mays GN=KNOX1 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.681e-45 Identity = 83/88 (94.32%), Postives = 87/88 (98.86%), Query Frame = 2 Query: 17 VRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSN 280 VRQELK+ELKQGFKSRIEDVREEILRKRRAGKLPGDTTS+LK WWQ+HSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWH+N Sbjct: 1 VRQELKLELKQGFKSRIEDVREEILRKRRAGKLPGDTTSILKQWWQEHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNN 88
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: KNOSB_ORYSJ (Homeobox protein knotted-1-like 11 OS=Oryza sativa subsp. japonica GN=HOS59 PE=2 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 3.746e-45 Identity = 84/106 (79.25%), Postives = 94/106 (88.68%), Query Frame = 2 Query: 2 ALTERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR 319 +L ERVRQELK ELKQG++ ++ D+REEILRKRRAGKLPGDT S LK WWQ HSKWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWHSN S +S KSKRKR Sbjct: 206 SLVERVRQELKHELKQGYREKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPASSSSDKSKRKR 311
BLAST of CX298097 vs. ExPASy Swiss-Prot
Match: LET12_SOLLC (Homeobox protein knotted-1-like LET12 OS=Solanum lycopersicum GN=LET12 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.090e-44 Identity = 84/108 (77.78%), Postives = 95/108 (87.96%), Query Frame = 2 Query: 2 ALTERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQSVTSLKSKRKR*R 325 +L ERVRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTTSVLK WWQ HSKWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWHSN + +S KS+ + R Sbjct: 319 SLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSSSQKSQTQECR 426 The following BLAST results are available for this feature:
BLAST of CX298097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298097 ID=CX298097; Name=CX298097; organism=Citrus clementina; type=EST; length=677bpback to top |