CX298113

Overview
NameCX298113
Unique NameCX298113
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length528
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX298113 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.057e-11
Identity = 36/92 (39.13%), Postives = 55/92 (59.78%), Query Frame = 3 
Query:    3 FGVVLLELVTGK---EANYGDEHTSLAEWAWRHYAEEKPITDALDKGIAEPCYL--EEMTTVYRLALICTSTLPSSRPSMKEVLQILRRCCP 263
            +GV+LLE++TGK   E  +G E  S+ +W       ++ + + LDK +   C L  EEM  + R+AL+CTS  P+ RP M++VL IL+   P
Sbjct:  912 YGVILLEIITGKRSVEPEFG-EGNSIVDWVRSKLKTKEDVEEVLDKSMGRSCSLIREEMKQMLRIALLCTSRSPTDRPPMRDVLLILQEAKP 1002
The following BLAST results are available for this feature:
BLAST of CX298113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5148_ARATH8.057e-1139.13Probable leucine-rich repeat receptor-like protein... [more]
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Properties
Property NameValue
Genbank descriptionC06008G02SK RindPdig24 Citrus clementina cDNA clone C06008G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298113 ID=CX298113; Name=CX298113; organism=Citrus clementina; type=EST; length=528bp
GCTTTGGAGTGGTACTGTTAGAATTGGTGACAGGAAAAGAAGCTAACTAT
GGTGACGAGCACACTAGTCTTGCTGAGTGGGCGTGGCGACACTATGCAGA
GGAGAAGCCTATCACTGATGCATTAGATAAGGGGATTGCGGAGCCGTGTT
ACTTGGAAGAAATGACCACTGTATATAGACTAGCACTCATCTGTACAAGC
ACTTTACCATCTTCCAGGCCTTCCATGAAAGAGGTTTTGCAGATTCTTCG
TCGATGTTGTCCGACAGAAAATTACGGAGGGAAAAAGATGGGTAGGGACG
TTGATTCTGCTCCACTTCTTGGTACTGCTGGTTATCTGTTCGGTTTCAAG
CGTAGTAAGAAGGTGGCAGCAGAAGAGGATAATGGCCTGGCGTAAAATGT
CTGGTGCATCATAAACCATGAAATGGCTACGTAGGGTTTTTATTGTATGT
AGGTTGAGAAGTATATTTTTGTAGGTAATGTTTGTATAGTTTCTTAATTC
AAGTCCTCGTAATATTTCTCCCCGTTCA
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