CX298122
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX298122 vs. ExPASy Swiss-Prot
Match: TRXM4_ARATH (Thioredoxin M-type 4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360 PE=1 SV=2) HSP 1 Score: 180.644 bits (457), Expect = 5.500e-45 Identity = 86/152 (56.58%), Postives = 108/152 (71.05%), Query Frame = 2 Query: 77 KFAEFKGLKVRPXXXXXXXXXXXXXXXXXXXXAQIVCEAQET---AVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 523 +F EF+GLK +I CEAQ+T AVEVP ++D+ WQ+ VL+S PVLVEFWAPWCGPCRMIHPI+D+L+K + GK K YK+NTDESP+ A RYGIRS+PTV+IFK GEKKD++IGAVP+ TL +IE+FL Sbjct: 40 RFLEFRGLKSSRSLVTQSASLGANRRTRIARGGRIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIERFL 191
BLAST of CX298122 vs. ExPASy Swiss-Prot
Match: TRXM_BRANA (Thioredoxin M-type, chloroplastic OS=Brassica napus PE=1 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.769e-43 Identity = 75/115 (65.22%), Postives = 99/115 (86.09%), Query Frame = 2 Query: 179 IVCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 523 I+CEAQ+TA +P V D+TW+SLVL + PV+V+FWAPWCGPC+MI PI++EL++QY GK+K +K+NTD+SP+ +YG+RSIPT+MIF GEKKDT+IGAVPK+TL TSI+KFL Sbjct: 62 IICEAQDTATGIPMVNDSTWESLVLKADEPVVVDFWAPWCGPCKMIDPIVNELAQQYTGKIKFFKLNTDDSPATPGKYGVRSIPTIMIFVKGEKKDTIIGAVPKTTLATSIDKFL 176
BLAST of CX298122 vs. ExPASy Swiss-Prot
Match: TRXM_PEA (Thioredoxin M-type, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.147e-42 Identity = 75/115 (65.22%), Postives = 97/115 (84.35%), Query Frame = 2 Query: 179 IVCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 523 ++ A+E EV V D++W LV+ S +PVLV+FWAPWCGPCRMI PIIDEL+K+Y GK+KCYK+NTDESP+ AT+YGIRSIPTV+ FKNGE+KD+VIGAVPK+TL+ +EK++ Sbjct: 58 VLLHAREAVNEVQVVNDSSWDELVIGSETPVLVDFWAPWCGPCRMIAPIIDELAKEYAGKIKCYKLNTDESPNTATKYGIRSIPTVLFFKNGERKDSVIGAVPKATLSEKVEKYI 172
BLAST of CX298122 vs. ExPASy Swiss-Prot
Match: TRXM2_ARATH (Thioredoxin M-type 2, chloroplastic OS=Arabidopsis thaliana GN=At4g03520 PE=1 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 4.358e-42 Identity = 72/115 (62.61%), Postives = 97/115 (84.35%), Query Frame = 2 Query: 179 IVCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 523 +VCEAQET ++ V D+TW SLVL + PV+V+FWAPWCGPC+MI P++++L++ Y GK+K YK+NTDESP+ +YG+RSIPT+MIF GEKKDT+IGAVPK+TLT+S++KFL Sbjct: 71 VVCEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPTIMIFVGGEKKDTIIGAVPKTTLTSSLDKFL 185
BLAST of CX298122 vs. ExPASy Swiss-Prot
Match: TRXM1_ARATH (Thioredoxin M-type 1, chloroplastic OS=Arabidopsis thaliana GN=At1g03680 PE=1 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 4.358e-42 Identity = 74/115 (64.35%), Postives = 94/115 (81.74%), Query Frame = 2 Query: 179 IVCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 523 ++CEAQ+TA +P V D+TW SLVL + PV V+FWAPWCGPC+MI PI++EL+++Y G+ K YK+NTDESP+ +YG+RSIPT+MIF NGEKKDT+IGAV K TL TSI KFL Sbjct: 65 VICEAQDTATGIPVVNDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQYGVRSIPTIMIFVNGEKKDTIIGAVSKDTLATSINKFL 179
BLAST of CX298122 vs. ExPASy Swiss-Prot
Match: TRXM_ORYSJ (Thioredoxin M-type, chloroplastic OS=Oryza sativa subsp. japonica GN=TRXM PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.268e-41 Identity = 75/117 (64.10%), Postives = 95/117 (81.20%), Query Frame = 2 Query: 173 AQIVCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 523 ++ C+ EV + W S+VL S +PVLVEFWAPWCGPCRMI P+IDEL+K+YVGK+KC KVNTD+SP+IAT YGIRSIPTV++FKNGEKK++VIGAVPK+TL T I+K++ Sbjct: 54 SRFACQCSNVVDEVVVADEKNWDSMVLGSEAPVLVEFWAPWCGPCRMIAPVIDELAKEYVGKIKCCKVNTDDSPNIATNYGIRSIPTVLMFKNGEKKESVIGAVPKTTLATIIDKYV 170
BLAST of CX298122 vs. ExPASy Swiss-Prot
Match: TRXM_SPIOL (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 2.824e-41 Identity = 73/117 (62.39%), Postives = 97/117 (82.91%), Query Frame = 2 Query: 173 AQIVCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 523 + +VC+A E EV V D++W+ VL+S PV+V+FWAPWCGPC++I P+IDEL+K+Y GK+ YK+NTDE+P IAT+Y IRSIPTV+ FKNGE+K+++IGAVPKSTLT SIEK+L Sbjct: 63 SSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 179
BLAST of CX298122 vs. ExPASy Swiss-Prot
Match: TRXM_MAIZE (Thioredoxin M-type, chloroplastic OS=Zea mays GN=TRM1 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.550e-39 Identity = 72/114 (63.16%), Postives = 91/114 (79.82%), Query Frame = 2 Query: 182 VCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 523 VC+++ EV + W LV+ +PVLVEFWAPWCGPCRMI P+IDEL+K Y GK+ C KVNTD+SP++A+ YGIRSIPTV+IFK GEKK++VIGAVPKSTLTT I+K++ Sbjct: 51 VCQSKNAVDEVVVADEKNWDGLVMACETPVLVEFWAPWCGPCRMIAPVIDELAKDYAGKITCCKVNTDDSPNVASTYGIRSIPTVLIFKGGEKKESVIGAVPKSTLTTLIDKYI 164
BLAST of CX298122 vs. ExPASy Swiss-Prot
Match: TRXM_WHEAT (Thioredoxin M-type, chloroplastic OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 4.509e-39 Identity = 71/117 (60.68%), Postives = 94/117 (80.34%), Query Frame = 2 Query: 173 AQIVCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 523 ++ VC+ + EV + W ++V+ SPVLVEFWAPWCGPCRMI P+IDEL+K YVGK+KC KVNTD+ P+IA+ YGIRSIPTV++FK+GEKK++VIGAVPK+TL T I+K++ Sbjct: 57 SRFVCKCKNVVDEVIVADEKNWDNMVIACESPVLVEFWAPWCGPCRMIAPVIDELAKDYVGKIKCCKVNTDDCPNIASTYGIRSIPTVLMFKDGEKKESVIGAVPKTTLCTIIDKYI 173
BLAST of CX298122 vs. ExPASy Swiss-Prot
Match: TRXM_CHLRE (Thioredoxin M-type, chloroplastic OS=Chlamydomonas reinhardtii GN=TRXM PE=1 SV=3) HSP 1 Score: 149.828 bits (377), Expect = 1.040e-35 Identity = 63/105 (60.00%), Postives = 89/105 (84.76%), Query Frame = 2 Query: 209 EVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTVIGAVPKSTLTTSIEKFL 523 E AV D T++++VL+S PVLV+FWAPWCGPCR+I P++DE++ +Y KLKC K+NTDESP++A+ YGIRSIPT+M+FK G+K +T+IGAVPK+T+ ++EK+L Sbjct: 35 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYL 139 The following BLAST results are available for this feature:
BLAST of CX298122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298122 ID=CX298122; Name=CX298122; organism=Citrus clementina; type=EST; length=626bpback to top |