CX298126

Overview
NameCX298126
Unique NameCX298126
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length680
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX298126 vs. ExPASy Swiss-Prot
Match: PFPB_RICCO (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta OS=Ricinus communis GN=PFP-BETA PE=3 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 3.753e-69
Identity = 126/153 (82.35%), Postives = 136/153 (88.89%), Query Frame = 2
Query:   14 MVETELENRKK-GVNKGQFKGQSHFFGYEGRCGLPTNFDATYCYALGYGAGALLHSGKTGLISSVGNLAAPVEEWTVSGTALTALMDVERRHGKFKPVIKKAMVELDGAPFKKFVSMRDEWALNNRYISPGPIQFTGPTSGDVNNTLLLELGA 469
            MVETELE RK+ G  K  FKGQSHFFGYEGRCGLPTNFD+TYCYALGY AGALLHSGKTGLISSVGNL APV EWTV GTALT+LMDVERRHGKFKPVIKKAMVEL+GAPFKKF S+R+EWAL NRY+SPGPIQF GP S   ++TLLLELG+
Sbjct:  398 MVETELEKRKQQGTYKAHFKGQSHFFGYEGRCGLPTNFDSTYCYALGYAAGALLHSGKTGLISSVGNLGAPVAEWTVGGTALTSLMDVERRHGKFKPVIKKAMVELEGAPFKKFASLREEWALKNRYVSPGPIQFMGPGSDAASHTLLLELGS 550          
BLAST of CX298126 vs. ExPASy Swiss-Prot
Match: PFPB_SOLTU (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 259.996 bits (663), Expect = 8.361e-69
Identity = 127/152 (83.55%), Postives = 136/152 (89.47%), Query Frame = 2
Query:   14 MVETELENRK-KGVNKGQFKGQSHFFGYEGRCGLPTNFDATYCYALGYGAGALLHSGKTGLISSVGNLAAPVEEWTVSGTALTALMDVERRHGKFKPVIKKAMVELDGAPFKKFVSMRDEWALNNRYISPGPIQFTGPTSGDVNNTLLLELG 466
            MVETEL+ RK KG    QFKGQ HFFGYEGRCGLP+NFD+TYCYALGYGAG+LL SGKTGLISSVGNLAAPVEE TV GTALTALMDVERRHGKFKPVIKKAMVEL+GAPFKKF S R+EWALNNRYI+PGPIQF GP +  VN+TLLLELG
Sbjct:  398 MVETELDQRKQKGAYNAQFKGQFHFFGYEGRCGLPSNFDSTYCYALGYGAGSLLQSGKTGLISSVGNLAAPVEELTVGGTALTALMDVERRHGKFKPVIKKAMVELEGAPFKKFASKREEWALNNRYINPGPIQFVGPVANKVNHTLLLELG 549          
BLAST of CX298126 vs. ExPASy Swiss-Prot
Match: PFPA_SOLTU (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.773e-18
Identity = 52/158 (32.91%), Postives = 87/158 (55.06%), Query Frame = 2
Query:   14 MVETELENR-KKGVNKGQ-FKGQSHFFGYEGRCGLPTNFDATYCYALGYGAGALLHSGKTGLISSVGNLAAPVEEWTVSGTALTALMDVERRHGKFK-------PVIKKAMVELDGAPFKKFVSMRDEWALNNRYISPGPIQFTGPTSGDVNNTLLLE 460
            +VETE+  R K+G  KG+ F    HFFGY+ R  LP+ FD  Y Y LG+    +L +G  G ++++ NL  P  +W    + ++A+M V +R+G+         P +  A V+L G  ++       ++ L++ Y +PGP+QF GP +     +L++E
Sbjct:  402 LVETEMNKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVLGHVCYHILAAGLNGYMATITNLKNPANKWHCGASPISAMMTV-KRYGRGPGKASIGVPALHPATVDLRGKSYELLSQNATKFLLDDVYRNPGPLQFDGPGADAKAGSLVVE 558          
BLAST of CX298126 vs. ExPASy Swiss-Prot
Match: PFPA_RICCO (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinus communis GN=PFP-ALPHA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.700e-17
Identity = 53/157 (33.76%), Postives = 81/157 (51.59%), Query Frame = 2
Query:   14 MVETELENR-KKGVNKGQ-FKGQSHFFGYEGRCGLPTNFDATYCYALGYGAGALLHSGKTGLISSVGNLAAPVEEWTVSGTALTALMDVER------RHGKFKPVIKKAMVELDGAPFKKFVSMRDEWALNNRYISPGPIQFTGPTSGDVNNTLLLE 460
            +VE E+  R K+G  KG+ F    HFFGY+ R  LP+ FD  Y Y LG+    +L +G  G +++  NL  PV +W      + A+M V+R           KP I  A V+L G  ++       ++ +++ Y +PGP+QF GP +     TL +E
Sbjct:  402 LVEAEMNKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVLGHICYHVLAAGLNGYMATATNLKNPVNKWRCGAAPIAAMMTVKRWAQNPGATSIGKPAIHPAAVDLKGKAYELLRLNAVKFLMDDLYRNPGPLQFEGPGADAKPITLCVE 558          
The following BLAST results are available for this feature:
BLAST of CX298126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PFPB_RICCO3.753e-6982.35Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
PFPB_SOLTU8.361e-6983.55Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
PFPA_SOLTU8.773e-1832.91Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
PFPA_RICCO9.700e-1733.76Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
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Properties
Property NameValue
Genbank descriptionC06008H03SK RindPdig24 Citrus clementina cDNA clone C06008H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298126 ID=CX298126; Name=CX298126; organism=Citrus clementina; type=EST; length=680bp
AGGTGTTAATTCAATGGTTGAGACAGAGTTGGAGAATAGGAAAAAGGGAG
TAAATAAAGGCCAATTCAAAGGGCAGTCCCACTTTTTCGGTTACGAAGGA
AGATGCGGTTTGCCAACTAACTTTGATGCTACCTACTGTTATGCACTGGG
TTATGGTGCGGGTGCTCTGCTTCATAGTGGGAAAACTGGGTTGATATCAT
CGGTAGGAAATTTGGCTGCTCCAGTGGAAGAATGGACTGTTAGTGGAACT
GCACTGACTGCATTAATGGATGTAGAGAGGAGACATGGCAAGTTCAAGCC
TGTGATTAAGAAGGCCATGGTGGAACTTGATGGTGCACCATTCAAGAAGT
TTGTATCCATGCGAGATGAGTGGGCTCTCAATAATCGCTACATCAGTCCT
GGTCCTATTCAATTCACTGGCCCAACATCCGGTGATGTTAATAACACACT
ACTCCTCGAACTCGGTGCTCAAGTATGAGCATGTTTTTAAATGTGTGCTT
AAATTGAAGATTGAAGTTCAAATGTTATAAGATACCAATTTTCTGTCTCT
TTTAATTTGATGCTAATATTTGGACACTTTTTCAGATATCAATGAGATAG
TTCTGTGTCGAATGGCGGTAGTTTGGATTTATGAGGATAATATTTTATTA
TTATTTACTTTTTCTTGCCAAAAAAAAAAA
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