CX298129
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX298129 vs. ExPASy Swiss-Prot
Match: GRPE_THEEB (Protein grpE OS=Thermosynechococcus elongatus (strain BP-1) GN=grpE PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.493e-20 Identity = 51/140 (36.43%), Postives = 83/140 (59.29%), Query Frame = 2 Query: 188 METLQSYKEALASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNP 607 +E +++ EA +D + A ++ LE +LS+ + ++ +R++ADF+NFRKRT++E+ L + V+ LL V+D+FE A+T I+ +TE EEKI+ SYQ +YKQLVE L +GV ++ G P Sbjct: 48 VENVENPAEATPGEEDQASEATSANAADLLEQIAALEAAKASLSQVVEERNSQYIRLAADFENFRKRTQREKEELELQIKCSVIADLLPVVDSFELARTHIQTETEAEEKIHRSYQGVYKQLVECLKRIGVSAMQAKGKP 187
BLAST of CX298129 vs. ExPASy Swiss-Prot
Match: GRPE_SYNY3 (Protein grpE OS=Synechocystis sp. (strain PCC 6803) GN=grpE PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.307e-19 Identity = 46/118 (38.98%), Postives = 74/118 (62.71%), Query Frame = 2 Query: 254 EALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNP 607 E ++ + + +++ SE+L + + R + ++A+FDNFRKRT++E+ +G + LL V+DNFERA+TQIK ++GE +I+ SYQ +YK LV+ L LGV P+ G P Sbjct: 69 EEIIAILQKDLASHRQELAEQSEQLDSIKKRYVALAAEFDNFRKRTQREKEEQAKLIKGRTITELLPVVDNFERARTQIKPNSDGENQIHKSYQGVYKNLVDSLKGLGVAPMRPEGKP 186
BLAST of CX298129 vs. ExPASy Swiss-Prot
Match: GRPE_SYNPW (Protein grpE OS=Synechococcus sp. (strain WH7803) GN=grpE PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.912e-19 Identity = 52/138 (37.68%), Postives = 78/138 (56.52%), Query Frame = 2 Query: 188 METLQSYKEALASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVG 601 +ET E +++D AAE+ + E LER+ L +E R + +RI+ADFDNFRKR +++ L + +L V+DNFERA+ Q+ Q E + ++ SYQ +YKQLV++L LGV P+ VG Sbjct: 23 VETPNDPVETPSASDPGSAAEVSPQTGNNEARLEQLEREHTTLRDEHDVLRGQYMRIAADFDNFRKRQSRDQDDLKIQLTCSTLSEILPVVDNFERARQQLDPQGEEAQALHRSYQGLYKQLVDVLKQLGVAPMRVVG 160
BLAST of CX298129 vs. ExPASy Swiss-Prot
Match: GRPE_SYNE7 (Protein grpE OS=Synechococcus elongatus (strain PCC 7942) GN=grpE PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.445e-18 Identity = 54/132 (40.91%), Postives = 78/132 (59.09%), Query Frame = 2 Query: 212 EALASNDDTKAAEIEALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNP 607 EA++ D T A+ EA + + + +R L EL + + LR++ADF+NFR+RT KER L ++ + LL V+DNF+RA+ QIK Q E E I+ SYQ +YKQLV+ L +GV P+ G P Sbjct: 21 EAVSEPDVTVASGQEAAELAAQLALVAADRD--RLKTELDEQNSAYLRLAADFENFRRRTLKEREELELQSKRTTITELLPVIDNFDRARAQIKPQGEEAEAIHKSYQGLYKQLVDCLKRIGVSPMRAEGQP 150
BLAST of CX298129 vs. ExPASy Swiss-Prot
Match: GRPE_CYAP7 (Protein grpE OS=Cyanothece sp. (strain PCC 7424) GN=grpE PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.465e-18 Identity = 49/118 (41.53%), Postives = 75/118 (63.56%), Query Frame = 2 Query: 254 EALLKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNP 607 E+LL++ + K LE + ++++ A + R + ++A+FDNFRKRT +E+ L A+ + + LL V+DNFERA+ QIK EGE +I+ SYQ +YK LV+ L LGV + G P Sbjct: 103 ESLLQTNQSLKDQLEEQ----NQQIDAAKRRYIGLAAEFDNFRKRTLREKEELEKQAKRKTLSELLTVVDNFERARLQIKPSNEGEGEIHKSYQGVYKNLVDSLKRLGVSAMRAEGEP 216
BLAST of CX298129 vs. ExPASy Swiss-Prot
Match: GRPE_ANASP (Protein grpE OS=Anabaena sp. (strain PCC 7120) GN=grpE PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.492e-18 Identity = 44/104 (42.31%), Postives = 68/104 (65.38%), Query Frame = 2 Query: 290 DLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVG 601 +L +++ +L +L + +RI+ADF+N+RKRT+KE+ L + + LL ++DNFERA++ +K QTE E I+ SYQ +YKQLV+ L LGV P+ G Sbjct: 79 ELTQQISSLKTQLDERSTQYMRIAADFENYRKRTQKEKEELDLQVKRNTILELLPIVDNFERARSHLKPQTESEMTIHKSYQGVYKQLVDSLKRLGVSPMRPEG 182
BLAST of CX298129 vs. ExPASy Swiss-Prot
Match: GRPE_ANAVT (Protein grpE OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=grpE PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.173e-18 Identity = 44/104 (42.31%), Postives = 68/104 (65.38%), Query Frame = 2 Query: 290 DLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVG 601 +L +++ +L +L + +RI+ADF+N+RKRT+KE+ L + + LL ++DNFERA++ +K QTE E I+ SYQ +YKQLV+ L LGV P+ G Sbjct: 79 ELTQQINSLKTQLDERSTQYMRIAADFENYRKRTQKEKEELDLQVKRNTILELLPIVDNFERARSHLKPQTESEMTIHKSYQGVYKQLVDSLKRLGVSPMRPEG 182
BLAST of CX298129 vs. ExPASy Swiss-Prot
Match: GRPE_PROMS (Protein grpE OS=Prochlorococcus marinus (strain AS9601) GN=grpE PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.726e-17 Identity = 45/139 (32.37%), Postives = 82/139 (58.99%), Query Frame = 2 Query: 188 METLQSYKEALASNDDTKAAEIEAL-LKSFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVG 601 +E + S +E N++ + + E + + ++ + + ++ L +E + + +RISADFDNFRKR +++ L + + +L ++DNFERA+ Q+K ++E + ++ SYQ +YKQLVE+L GV P+ VG Sbjct: 23 LENVSSAQELTTENNELSSQKTEEINTEELKNSISNNDARLEQLEKEHETLKNQYVRISADFDNFRKRQSRDQDDLKIQLVSKTLTAILPIVDNFERARQQLKPESEEAQSLHRSYQGLYKQLVEVLKQQGVSPMRVVG 161
BLAST of CX298129 vs. ExPASy Swiss-Prot
Match: GRPE_GLOVI (Protein grpE OS=Gloeobacter violaceus GN=grpE PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.726e-17 Identity = 47/138 (34.06%), Postives = 79/138 (57.25%), Query Frame = 2 Query: 203 SYKEALASNDDTKAAEIEALLKSFED---EKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGVVPVETVGNP 607 SY EA + + AAE + + E DL++K+ + ++ + R+ ADFDNFRKRT++E+ L ++++ +L V DNF+RA+ + E EEK++NSYQ +Y+Q + +L +GV +E +G P Sbjct: 17 SYAEAATT--EASAAEATGFIARIDQLAAENSDLQKKLADYEQKYT-------RLMADFDNFRKRTQREKDELAYFVSAKLLKDILPVFDNFDRARAFAQPDNEREEKLHNSYQQVYRQFLSVLEKMGVTAMEAIGQP 145
BLAST of CX298129 vs. ExPASy Swiss-Prot
Match: GRPE_TRIEI (Protein grpE OS=Trichodesmium erythraeum (strain IMS101) GN=grpE PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.560e-17 Identity = 52/122 (42.62%), Postives = 74/122 (60.66%), Query Frame = 2 Query: 218 LASNDDTKAAEIEALLK-SFEDEKIDLERKVVNLSEELSAERARILRISADFDNFRKRTEKERLSLVTNAQGEVMERLLQVLDNFERAKTQIKVQTEGEEKINNSYQSIYKQLVEILGSLGV 580 + S + T + + LLK ++E + LE L E+ S + R+ ADFDNFRKRT+KE+ L T + + LL V+DNFERA++ IK +GE I+ SYQS+YKQ+V+ L LGV Sbjct: 54 IQSTESTSKEKDQVLLKEAYELLQTQLETTKYQLEEKESQYK----RLGADFDNFRKRTQKEKEDLDTQVKCSTIMELLPVIDNFERARSHIKPANDGEMAIHKSYQSVYKQMVDSLKRLGV 171 The following BLAST results are available for this feature:
BLAST of CX298129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298129 ID=CX298129; Name=CX298129; organism=Citrus clementina; type=EST; length=613bpback to top |