CX298235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX298235 vs. ExPASy Swiss-Prot
Match: TRXL6_ARATH (Thioredoxin-like 6, chloroplastic OS=Arabidopsis thaliana GN=At4g29670 PE=2 SV=2) HSP 1 Score: 221.861 bits (564), Expect = 2.568e-57 Identity = 100/127 (78.74%), Postives = 114/127 (89.76%), Query Frame = 2 Query: 254 PRKRLISFKVHATLAETNQPKWWEKNAPNMIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKVLPYFHFYRGAHGQLESFSCSLAKFQK 634 P+ +++ KV +AET PKWWE+NAPNM+DIHST+EFL ALS AG+RLVIVEFYGTWCASCRALFPKLC+TA EHP+IVFLKVNFDENKPMCKSLNV+VLP+FHFYRGA GQLESFSCSLAK +K Sbjct: 76 PKSQVVRVKVDENVAETEPPKWWERNAPNMVDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFLKVNFDENKPMCKSLNVRVLPFFHFYRGADGQLESFSCSLAKVKK 202
BLAST of CX298235 vs. ExPASy Swiss-Prot
Match: TRXL2_ARATH (Thioredoxin-like 2, chloroplastic OS=Arabidopsis thaliana GN=At4g26160 PE=2 SV=2) HSP 1 Score: 209.534 bits (532), Expect = 1.319e-53 Identity = 104/159 (65.41%), Postives = 118/159 (74.21%), Query Frame = 2 Query: 179 ISDNKRIYPLXXXXXXXGLARFSL------TPRKRLISFKVHATLAETNQPKWWEKNA-PNMIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKVLPYFHFYRGAHGQLESFSCSLAKFQK 634 +S R Y L L SL + R + +S KV A AET QPKWWE+ A PNMIDI S ++FL AL AGDRLVIV+FYGTWC SCRA+FPKLC+TA+EHP I+FLKVNFDENK +CKSLNVKVLPYFHFYRGA GQ+ESFSCSLAKFQK Sbjct: 34 LSSCNRFYGLSSSSSSSSLTTSSLIGNLVFSSRNQSLSVKVQALAAETEQPKWWERKAGPNMIDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTAKEHPNILFLKVNFDENKSLCKSLNVKVLPYFHFYRGADGQVESFSCSLAKFQK 192
BLAST of CX298235 vs. ExPASy Swiss-Prot
Match: TRXL1_ARATH (Thioredoxin-like 1 OS=Arabidopsis thaliana GN=At1g08570 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.163e-31 Identity = 58/126 (46.03%), Postives = 85/126 (67.46%), Query Frame = 2 Query: 260 KRLISFKVHATLAETNQPKWWEKNAP-NMIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKVLPYFHFYRGAHGQLESFSCSLAKFQK 634 +R + TL KWWEK NM +I S QE +++L+ AGD+LV+V+F+ C C+AL PK+C+ AE +P++ FL+VN++E+K MC SL V VLP+F FYRG+ G++ SFSC+ A +K Sbjct: 71 RRSSAITAQTTLRIGTAQKWWEKGLKDNMREISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGSQGRVCSFSCTNATIKK 196 HSP 2 Score: 30.0314 bits (66), Expect = 2.163e-31 Identity = 10/20 (50.00%), Postives = 15/20 (75.00%), Query Frame = 1 Query: 625 VSKIKEAIALHNTDRCSIGP 684 + K ++A+A H DRCS+GP Sbjct: 194 IKKFRDALAKHGPDRCSLGP 213
BLAST of CX298235 vs. ExPASy Swiss-Prot
Match: TRXL7_ARATH (Thioredoxin-like 7, chloroplastic OS=Arabidopsis thaliana GN=At2g33270 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 3.032e-30 Identity = 58/133 (43.61%), Postives = 92/133 (69.17%), Query Frame = 2 Query: 248 LTPRKRLISF-KVHATLAETNQPKWWEKNA-PNMIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKVLPYFHFYRGAHGQLESFSCSLAKFQK*K 640 L +K++ +F + +L KWWEK PNM + S Q+ + +L AGD+LV+V+F+ C C+AL PK+C+ AE++PE+ FL+VN++E++ +C+SLN+ VLP+F FYRG+ G++ SFSC+ A +K K Sbjct: 62 LFSKKKIPAFVRCQTSLGIGRNQKWWEKELKPNMKSVTSPQDLVVSLRNAGDKLVVVDFFSPSCGGCKALHPKICKIAEKNPEVEFLQVNYEEHRSLCQSLNIHVLPFFRFYRGSSGRVCSFSCTNATIRKFK 194 HSP 2 Score: 25.0238 bits (53), Expect = 3.032e-30 Identity = 9/19 (47.37%), Postives = 13/19 (68.42%), Query Frame = 1 Query: 625 VSKIKEAIALHNTDRCSIG 681 + K KEA+ H ++CSIG Sbjct: 190 IRKFKEALEKHGREQCSIG 208
BLAST of CX298235 vs. ExPASy Swiss-Prot
Match: TRXL3_ARATH (Thioredoxin-like 3, chloroplastic OS=Arabidopsis thaliana GN=At5g61440 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.509e-29 Identity = 54/111 (48.65%), Postives = 79/111 (71.17%), Query Frame = 2 Query: 314 KWWEKNAP-NMIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKVLPYFHFYRGAHGQLESFSCSLAKFQK*KR 643 +WWEK+ NM++I S +++L AGDRLV+++FY C C++L PK+C+ AE +P ++FLKVN +E + MC LNV VLP+F FYRGA G++ SFSC++A K K+ Sbjct: 77 RWWEKSTNHNMLEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLHPKICQLAETNPNVMFLKVNQEELRTMCHGLNVHVLPFFKFYRGAEGKVCSFSCTIATINKFKK 187 HSP 2 Score: 25.409 bits (54), Expect = 2.509e-29 Identity = 8/19 (42.11%), Postives = 15/19 (78.95%), Query Frame = 1 Query: 625 VSKIKEAIALHNTDRCSIG 681 ++K K+A+ H ++RCS+G Sbjct: 182 INKFKKALDKHGSERCSLG 200
BLAST of CX298235 vs. ExPASy Swiss-Prot
Match: THIO_GEOCY (Thioredoxin OS=Geodia cydonium GN=THIO PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.321e-12 Identity = 27/72 (37.50%), Postives = 47/72 (65.28%), Query Frame = 2 Query: 365 EFLEALSQAGDRLVIVEFYGTWCASCRALFPKLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKVLPYFHFYR 580 +F +AL AGD+LV+++F +WC C+ + PK A+E P+++F KV+ DEN ++ ++ +P F FY+ Sbjct: 10 DFDQALKDAGDKLVVIDFTASWCGPCQRIAPKYVEMAKEFPDVIFYKVDVDENDETAEAEKIQAMPTFKFYK 81
BLAST of CX298235 vs. ExPASy Swiss-Prot
Match: THIO_ICTPU (Thioredoxin OS=Ictalurus punctatus GN=txn PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 31/92 (33.70%), Postives = 54/92 (58.70%), Query Frame = 2 Query: 341 MIDIHSTQEFLEALSQAGDRLVIVEFYGTWCASCRALFP--KLCRTAEEHPEIVFLKVNFDENKPMCKSLNVKVLPYFHFYRGAHGQLESFS 610 ++ I + F AL AGD+LV+V+F TWC C+ + P + +E++ +VFLKV+ D+ + ++K +P FHFY+ +++ FS Sbjct: 2 VVHIENLNAFSAALKNAGDKLVVVDFTATWCGPCQKIGPIFETLSKSEDYQNVVFLKVDVDDAADVSSHCDIKCMPTFHFYKNGQ-KIDEFS 92 The following BLAST results are available for this feature:
BLAST of CX298235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX298235 ID=CX298235; Name=CX298235; organism=Citrus clementina; type=EST; length=686bpback to top |