CX298241
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX298241 vs. ExPASy Swiss-Prot
Match: RS10B_YEAST (40S ribosomal protein S10-B OS=Saccharomyces cerevisiae GN=RPS10B PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 5.570e-23 Identity = 47/65 (72.31%), Postives = 59/65 (90.77%), Query Frame = 1 Query: 7 KHSDIDTKNLYVIKALQSLDSRGFVKTQFSWQYYYYTLTPEGLDYLREWLHLPAEVVPATHIKQQ 201 KH +IDTKNLYVIKALQSL S+G+VKTQFSWQYYYYTLT EG++YLRE+L+LP +VP T+I+++ Sbjct: 31 KHEEIDTKNLYVIKALQSLTSKGYVKTQFSWQYYYYTLTEEGVEYLREYLNLPEHIVPGTYIQER 95
BLAST of CX298241 vs. ExPASy Swiss-Prot
Match: RS10A_YEAST (40S ribosomal protein S10-A OS=Saccharomyces cerevisiae GN=RPS10A PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 5.570e-23 Identity = 47/65 (72.31%), Postives = 59/65 (90.77%), Query Frame = 1 Query: 7 KHSDIDTKNLYVIKALQSLDSRGFVKTQFSWQYYYYTLTPEGLDYLREWLHLPAEVVPATHIKQQ 201 KH +IDTKNLYVIKALQSL S+G+VKTQFSWQYYYYTLT EG++YLRE+L+LP +VP T+I+++ Sbjct: 31 KHEEIDTKNLYVIKALQSLTSKGYVKTQFSWQYYYYTLTEEGVEYLREYLNLPEHIVPGTYIQER 95
BLAST of CX298241 vs. ExPASy Swiss-Prot
Match: RS10B_SCHPO (40S ribosomal protein S10-B OS=Schizosaccharomyces pombe GN=rps10b PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.610e-22 Identity = 47/72 (65.28%), Postives = 60/72 (83.33%), Query Frame = 1 Query: 1 LPKHSDIDTKNLYVIKALQSLDSRGFVKTQFSWQYYYYTLTPEGLDYLREWLHLPAEVVPATHIKQQRSHAP 216 LPKH ++ NL VIKA QSLDSRG++KT+++W ++YYTLT EG++YLRE+LHLPAEVVPATH +Q R AP Sbjct: 29 LPKHPEVGVPNLQVIKACQSLDSRGYLKTRYNWGWFYYTLTNEGVEYLREYLHLPAEVVPATHKRQVRPAAP 100
BLAST of CX298241 vs. ExPASy Swiss-Prot
Match: RS10A_SCHPO (40S ribosomal protein S10-A OS=Schizosaccharomyces pombe GN=rps10a PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.610e-22 Identity = 47/72 (65.28%), Postives = 60/72 (83.33%), Query Frame = 1 Query: 1 LPKHSDIDTKNLYVIKALQSLDSRGFVKTQFSWQYYYYTLTPEGLDYLREWLHLPAEVVPATHIKQQRSHAP 216 LPKH ++ NL VIKA QSLDSRG++KT+++W ++YYTLT EG++YLRE+LHLPAEVVPATH +Q R AP Sbjct: 29 LPKHPEVGVPNLQVIKACQSLDSRGYLKTRYNWGWFYYTLTNEGVEYLREYLHLPAEVVPATHKRQVRPTAP 100
BLAST of CX298241 vs. ExPASy Swiss-Prot
Match: RS10_LUMRU (40S ribosomal protein S10 OS=Lumbricus rubellus GN=RPS10 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.854e-18 Identity = 42/71 (59.15%), Postives = 55/71 (77.46%), Query Frame = 1 Query: 1 LPKHSDIDTKNLYVIKALQSLDSRGFVKTQFSWQYYYYTLTPEGLDYLREWLHLPAEVVPATHIKQQRSHA 213 LPKH +ID NL+VI+A+QSL SRG+VK QF W++YY+ L EG+ YLR++LHLP E+VPAT +Q R A Sbjct: 29 LPKHGEIDVPNLHVIRAMQSLVSRGYVKEQFCWRHYYWYLQNEGIQYLRDFLHLPPEIVPATLKRQTRPEA 99
BLAST of CX298241 vs. ExPASy Swiss-Prot
Match: RS10_RAT (40S ribosomal protein S10 OS=Rattus norvegicus GN=Rps10 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.613e-16 Identity = 37/65 (56.92%), Postives = 53/65 (81.54%), Query Frame = 1 Query: 1 LPKHSDIDTKN---LYVIKALQSLDSRGFVKTQFSWQYYYYTLTPEGLDYLREWLHLPAEVVPAT 186 +PKH ++ KN L+V+KA+QSL SRG+VK QF+W+++Y+ LT EG+ YLR++LHLP E+VPAT Sbjct: 29 MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPAT 93
BLAST of CX298241 vs. ExPASy Swiss-Prot
Match: RS10_MOUSE (40S ribosomal protein S10 OS=Mus musculus GN=Rps10 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.613e-16 Identity = 37/65 (56.92%), Postives = 53/65 (81.54%), Query Frame = 1 Query: 1 LPKHSDIDTKN---LYVIKALQSLDSRGFVKTQFSWQYYYYTLTPEGLDYLREWLHLPAEVVPAT 186 +PKH ++ KN L+V+KA+QSL SRG+VK QF+W+++Y+ LT EG+ YLR++LHLP E+VPAT Sbjct: 29 MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPAT 93
BLAST of CX298241 vs. ExPASy Swiss-Prot
Match: RS10_HUMAN (40S ribosomal protein S10 OS=Homo sapiens GN=RPS10 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.613e-16 Identity = 37/65 (56.92%), Postives = 53/65 (81.54%), Query Frame = 1 Query: 1 LPKHSDIDTKN---LYVIKALQSLDSRGFVKTQFSWQYYYYTLTPEGLDYLREWLHLPAEVVPAT 186 +PKH ++ KN L+V+KA+QSL SRG+VK QF+W+++Y+ LT EG+ YLR++LHLP E+VPAT Sbjct: 29 MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPAT 93
BLAST of CX298241 vs. ExPASy Swiss-Prot
Match: RS10_BOVIN (40S ribosomal protein S10 OS=Bos taurus GN=RPS10 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.613e-16 Identity = 37/65 (56.92%), Postives = 53/65 (81.54%), Query Frame = 1 Query: 1 LPKHSDIDTKN---LYVIKALQSLDSRGFVKTQFSWQYYYYTLTPEGLDYLREWLHLPAEVVPAT 186 +PKH ++ KN L+V+KA+QSL SRG+VK QF+W+++Y+ LT EG+ YLR++LHLP E+VPAT Sbjct: 29 MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPAT 93
BLAST of CX298241 vs. ExPASy Swiss-Prot
Match: RS10_XENLA (40S ribosomal protein S10 OS=Xenopus laevis GN=rps10 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.125e-15 Identity = 37/65 (56.92%), Postives = 53/65 (81.54%), Query Frame = 1 Query: 1 LPKHSDIDTKN---LYVIKALQSLDSRGFVKTQFSWQYYYYTLTPEGLDYLREWLHLPAEVVPAT 186 +PKH ++ KN L+V+KA+QSL SRG+VK QF+W+++Y+ LT EG+ YLR++LHLP E+VPAT Sbjct: 29 MPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPAT 93 The following BLAST results are available for this feature:
BLAST of CX298241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298241 ID=CX298241; Name=CX298241; organism=Citrus clementina; type=EST; length=605bpback to top |