CX298246

Overview
NameCX298246
Unique NameCX298246
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX298246 vs. ExPASy Swiss-Prot
Match: Y4844_ARATH (Uncharacterized protein At4g28440 OS=Arabidopsis thaliana GN=At4g28440 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.892e-19
Identity = 43/59 (72.88%), Postives = 52/59 (88.14%), Query Frame = 1 
Query:    1 EVMKEGTTVILRNAKIDMFKGSMRLAVDKWGRVEVAEPANFTVKEDNNLSLIEYELVNV 177
            ++MK G TVILRN++IDMFKG+MRL VDKWGR+E    A+FTVKEDNNLSL+EYEL+NV
Sbjct:   91 DLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATGAASFTVKEDNNLSLVEYELINV 149
The following BLAST results are available for this feature:
BLAST of CX298246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4844_ARATH3.892e-1972.88Uncharacterized protein At4g28440 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionC06010B08SK RindPdig24 Citrus clementina cDNA clone C06010B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298246 ID=CX298246; Name=CX298246; organism=Citrus clementina; type=EST; length=714bp
GAGGTGATGAAAGAGGGTACTACTGTGATTCTGCGCAATGCAAAAATTGA
CATGTTTAAAGGATCAATGAGACTTGCTGTGGACAAGTGGGGCCGTGTTG
AAGTTGCAGAGCCTGCCAATTTCACCGTGAAGGAAGATAACAACCTCTCT
CTGATTGAATATGAGCTTGTGAATGTTGTAGAAGAGTGAATTTCTGGACG
GTGTTCACTTACTCACTGCAATGTGACCCAAGAATAAAAAGAAATCCAGC
ATATCATAGTACTGTCGTTTATGCGGCATCTCCTGTCCAAAACTGTGGTG
CCTTTAGGAAGAAGAAATCTGGAAGCTATTACTACCCAAGATGCTTTCTA
CCGTTGTGGCAGATCCAGTAGAACCTTTTGATTGGACCTCCAAACAGATG
GTGATGGCTCTAAAGTTGATAAGTGAAAGCAGCTGGCATTTAGAACTGTC
TTTGGTTTGTTTGCGACCTATTTATTTTTGGAACTCAACTGTTCTTTGGC
TATTAGATTATACTTGAAATATTAATATCGTGAAATGTATGTTATTATAT
ATAAGTGTGGTTTTGGCCTGCTTAATCTGTCCAACCATATGTTTTATTGG
CCAAGTCACCCATGTGAATGCGCTCTTTGGTAATCCTGAGCACTTGACAT
TGACACAGTGTTTGACGGACATGGGGAAAAACCTATGTTTTATGTAATGT
TTAATGGTTAGCTT
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