CX298264
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298264 vs. ExPASy Swiss-Prot
Match: RL1B_SCHPO (60S ribosomal protein L1-B OS=Schizosaccharomyces pombe GN=rpl1b PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 8.533e-39 Identity = 72/95 (75.79%), Postives = 89/95 (93.68%), Query Frame = 1 Query: 7 LLGPGLSKAGKFPTPVSHAEDMAAKVTDVKSTIKFQLKKVLCLGVAIGNVEMEKEALVANLMLAINYLVSLLKKGWQNVGSLVIKASMSPPHRVY 291 LLGPGLSKAGKFP+PVSHA+D+ K+T+VKSTIKFQLKKVLCLGVA+G+VEM +E L+AN+MLA+N+LVSLLKKGWQN+GSLV+K++M PHR+Y Sbjct: 122 LLGPGLSKAGKFPSPVSHADDLYGKITEVKSTIKFQLKKVLCLGVAVGHVEMSEEQLIANIMLAVNFLVSLLKKGWQNIGSLVVKSTMGKPHRLY 216
BLAST of CX298264 vs. ExPASy Swiss-Prot
Match: RL10A_NEUCR (60S ribosomal protein L10a OS=Neurospora crassa GN=rpl-10a PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 1.901e-38 Identity = 75/95 (78.95%), Postives = 86/95 (90.53%), Query Frame = 1 Query: 7 LLGPGLSKAGKFPTPVSHAEDMAAKVTDVKSTIKFQLKKVLCLGVAIGNVEMEKEALVANLMLAINYLVSLLKKGWQNVGSLVIKASMSPPHRVY 291 LLGPGLSKAGKFPTPVSH++D+ K+ +VKSTIKFQLKKVLC+GVA+GNV M +E LV N+MLAINYLVSLLKKGWQNVGSL IKA+MSPP R+Y Sbjct: 123 LLGPGLSKAGKFPTPVSHSDDLTGKLNEVKSTIKFQLKKVLCMGVAVGNVGMTQEQLVGNIMLAINYLVSLLKKGWQNVGSLTIKATMSPPKRLY 217
BLAST of CX298264 vs. ExPASy Swiss-Prot
Match: RL1A_SCHPO (60S ribosomal protein L1-A OS=Schizosaccharomyces pombe GN=rpl1a PE=1 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 5.177e-36 Identity = 70/95 (73.68%), Postives = 86/95 (90.53%), Query Frame = 1 Query: 7 LLGPGLSKAGKFPTPVSHAEDMAAKVTDVKSTIKFQLKKVLCLGVAIGNVEMEKEALVANLMLAINYLVSLLKKGWQNVGSLVIKASMSPPHRVY 291 LLGPGLSKAGKFP+PVSH++D+ K+ +VKSTIKFQLKKVLCLGVA+G+V+M +E L ANL LAIN+LVSLLKKGWQN+GSLVIK++M P+R+Y Sbjct: 122 LLGPGLSKAGKFPSPVSHSDDLYGKIIEVKSTIKFQLKKVLCLGVAVGHVDMAEEQLAANLSLAINFLVSLLKKGWQNIGSLVIKSTMGKPYRLY 216
BLAST of CX298264 vs. ExPASy Swiss-Prot
Match: RL1_YEAST (60S ribosomal protein L1 OS=Saccharomyces cerevisiae GN=RPL1A PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 3.710e-34 Identity = 67/95 (70.53%), Postives = 82/95 (86.32%), Query Frame = 1 Query: 7 LLGPGLSKAGKFPTPVSHAEDMAAKVTDVKSTIKFQLKKVLCLGVAIGNVEMEKEALVANLMLAINYLVSLLKKGWQNVGSLVIKASMSPPHRVY 291 LLGP LSKAGKFPTPVSH +D+ KVTDV+STIKFQLKKVLCL VA+GNVEME++ LV +++++N+ VSLLKK WQNVGSLV+K+SM P R+Y Sbjct: 123 LLGPQLSKAGKFPTPVSHNDDLYGKVTDVRSTIKFQLKKVLCLAVAVGNVEMEEDVLVNQILMSVNFFVSLLKKNWQNVGSLVVKSSMGPAFRLY 217
BLAST of CX298264 vs. ExPASy Swiss-Prot
Match: RL10A_ASHGO (60S ribosomal protein L10a OS=Ashbya gossypii GN=RPL10A PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 3.710e-34 Identity = 67/95 (70.53%), Postives = 84/95 (88.42%), Query Frame = 1 Query: 7 LLGPGLSKAGKFPTPVSHAEDMAAKVTDVKSTIKFQLKKVLCLGVAIGNVEMEKEALVANLMLAINYLVSLLKKGWQNVGSLVIKASMSPPHRVY 291 LLGP LSKAGKFPTPVSH +D+ +KVTDV+STIKFQLKKVLCL VA+GNVEM+++ LV +++++N+LVSLLKK WQNVGSLVIK++M P R+Y Sbjct: 123 LLGPQLSKAGKFPTPVSHNDDLYSKVTDVRSTIKFQLKKVLCLAVAVGNVEMDEDTLVNQILMSVNFLVSLLKKNWQNVGSLVIKSTMGPAFRLY 217
BLAST of CX298264 vs. ExPASy Swiss-Prot
Match: RL10A_CANGA (60S ribosomal protein L10a OS=Candida glabrata GN=RPL10A PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 4.846e-34 Identity = 67/95 (70.53%), Postives = 83/95 (87.37%), Query Frame = 1 Query: 7 LLGPGLSKAGKFPTPVSHAEDMAAKVTDVKSTIKFQLKKVLCLGVAIGNVEMEKEALVANLMLAINYLVSLLKKGWQNVGSLVIKASMSPPHRVY 291 LLGP LSKAGKFPTPVSH +D+ KVTDV+STIKFQLKKVLCL VA+GNVEM+++ LV +++++N+LVSLLKK WQNVGSLVIK++M P R+Y Sbjct: 123 LLGPQLSKAGKFPTPVSHNDDLYGKVTDVRSTIKFQLKKVLCLAVAVGNVEMDEDTLVNQILMSVNFLVSLLKKNWQNVGSLVIKSTMGPAFRLY 217
BLAST of CX298264 vs. ExPASy Swiss-Prot
Match: RL10A_CANAL (60S ribosomal protein L10a OS=Candida albicans GN=RPL10A PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.841e-33 Identity = 68/95 (71.58%), Postives = 82/95 (86.32%), Query Frame = 1 Query: 7 LLGPGLSKAGKFPTPVSHAEDMAAKVTDVKSTIKFQLKKVLCLGVAIGNVEMEKEALVANLMLAINYLVSLLKKGWQNVGSLVIKASMSPPHRVY 291 LLG LSKAG+FPTPVSH +D+ +KVTDVKSTIKFQLKKVLCL VA+GNV+ME++ LV +M+A N+LVSLLKK WQNVGSLVIK++M P R+Y Sbjct: 123 LLGRTLSKAGQFPTPVSHNDDLYSKVTDVKSTIKFQLKKVLCLAVAVGNVDMEEDVLVNQIMMAANFLVSLLKKNWQNVGSLVIKSTMGPSFRIY 217
BLAST of CX298264 vs. ExPASy Swiss-Prot
Match: RL10A_DICDI (60S ribosomal protein L10a OS=Dictyostelium discoideum GN=rpl10a PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 7.736e-32 Identity = 60/95 (63.16%), Postives = 80/95 (84.21%), Query Frame = 1 Query: 7 LLGPGLSKAGKFPTPVSHAEDMAAKVTDVKSTIKFQLKKVLCLGVAIGNVEMEKEALVANLMLAINYLVSLLKKGWQNVGSLVIKASMSPPHRVY 291 LLGPGL+K GKFPT ++H+EDMA+K+ DVKST+KFQLKKVLCL VA+G++E+ + + N++ +IN+LVSLLKKGWQN+ +L +K SM P HRVY Sbjct: 123 LLGPGLNKVGKFPTLLTHSEDMASKINDVKSTVKFQLKKVLCLAVAVGHIELTEREVATNIIQSINFLVSLLKKGWQNIKTLYVKTSMGPSHRVY 217
BLAST of CX298264 vs. ExPASy Swiss-Prot
Match: R10A2_ARATH (60S ribosomal protein L10a-2 OS=Arabidopsis thaliana GN=RPL10AB PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 3.250e-30 Identity = 58/95 (61.05%), Postives = 78/95 (82.11%), Query Frame = 1 Query: 7 LLGPGLSKAGKFPTPVSHAEDMAAKVTDVKSTIKFQLKKVLCLGVAIGNVEMEKEALVANLMLAINYLVSLLKKGWQNVGSLVIKASMSPPHRVY 291 LLGPGL+KAGKFPT VSH E + AKV + K+T+KFQLKKVLC+GVA+GN+ ME++ L N+ +++N+LVSLLKK WQNV L +K++M PP R++ Sbjct: 122 LLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216
BLAST of CX298264 vs. ExPASy Swiss-Prot
Match: RL10A_MACFA (60S ribosomal protein L10a OS=Macaca fascicularis GN=RPL10A PE=2 SV=3) HSP 1 Score: 129.413 bits (324), Expect = 5.544e-30 Identity = 60/95 (63.16%), Postives = 80/95 (84.21%), Query Frame = 1 Query: 7 LLGPGLSKAGKFPTPVSHAEDMAAKVTDVKSTIKFQLKKVLCLGVAIGNVEMEKEALVANLMLAINYLVSLLKKGWQNVGSLVIKASMSPPHRVY 291 +LGPGL+KAGKFP+P++H E+M AKV +VKSTIKFQ+K+VLCL VA+G+V+M + LV N+ LA+N+LVSLLKK WQNV +L IK++M P R+Y Sbjct: 123 ILGPGLNKAGKFPSPLTHNENMVAKVDEVKSTIKFQMKRVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217 The following BLAST results are available for this feature:
BLAST of CX298264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298264 ID=CX298264; Name=CX298264; organism=Citrus clementina; type=EST; length=409bpback to top |