CX298268
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX298268 vs. ExPASy Swiss-Prot
Match: RS11_EUPES (40S ribosomal protein S11 OS=Euphorbia esula GN=RPS11 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.290e-26 Identity = 55/58 (94.83%), Postives = 57/58 (98.28%), Query Frame = 3 Query: 6 EKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 179 EKRHSNIPAH+SPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGG KKAFTA+ Sbjct: 102 EKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGVKKAFTAI 159
BLAST of CX298268 vs. ExPASy Swiss-Prot
Match: RS11_SOYBN (40S ribosomal protein S11 OS=Glycine max GN=RPS11 PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 1.862e-25 Identity = 55/58 (94.83%), Postives = 55/58 (94.83%), Query Frame = 3 Query: 6 EKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 179 EKRHSNIPAHISP FRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS GAKKAFT M Sbjct: 102 EKRHSNIPAHISPAFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
BLAST of CX298268 vs. ExPASy Swiss-Prot
Match: RS11_MAIZE (40S ribosomal protein S11 OS=Zea mays GN=RPS11 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.576e-24 Identity = 52/57 (91.23%), Postives = 54/57 (94.74%), Query Frame = 3 Query: 6 EKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTA 176 EKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNV+KVIPAGS+ KKAFTA Sbjct: 102 EKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVVKVIPAGSAAAGKKAFTA 158
BLAST of CX298268 vs. ExPASy Swiss-Prot
Match: RS113_ARATH (40S ribosomal protein S11-3 OS=Arabidopsis thaliana GN=RPS11C PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 4.587e-24 Identity = 51/58 (87.93%), Postives = 54/58 (93.10%), Query Frame = 3 Query: 6 EKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 179 EKRHSNIPAH+SPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAG+S KKAFT + Sbjct: 102 EKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGASAFGKKAFTGV 159
BLAST of CX298268 vs. ExPASy Swiss-Prot
Match: RS111_ARATH (40S ribosomal protein S11-1 OS=Arabidopsis thaliana GN=RPS11A PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.022e-23 Identity = 52/59 (88.14%), Postives = 54/59 (91.53%), Query Frame = 3 Query: 6 EKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGG-AKKAFTAM 179 EKRHSNIPAH+SPCFRVKEGDH+IIGQCRPLSKTVRFNVLKVIPAGSS KKAFT M Sbjct: 102 EKRHSNIPAHVSPCFRVKEGDHIIIGQCRPLSKTVRFNVLKVIPAGSSSSFGKKAFTGM 160
BLAST of CX298268 vs. ExPASy Swiss-Prot
Match: RS112_ARATH (40S ribosomal protein S11-2 OS=Arabidopsis thaliana GN=RPS11B PE=2 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 2.973e-23 Identity = 51/58 (87.93%), Postives = 52/58 (89.66%), Query Frame = 3 Query: 6 EKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 179 EKRHSNIPAH+SPCFRVKEGD V IGQCRPLSKTVRFNVLKVIPAGSS KKAFT M Sbjct: 102 EKRHSNIPAHVSPCFRVKEGDRVTIGQCRPLSKTVRFNVLKVIPAGSSSIGKKAFTGM 159
BLAST of CX298268 vs. ExPASy Swiss-Prot
Match: RS11_DUNTE (40S ribosomal protein S11 OS=Dunaliella tertiolecta GN=RPS11 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.880e-18 Identity = 43/57 (75.44%), Postives = 53/57 (92.98%), Query Frame = 3 Query: 6 EKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIP-AGSSGGAKKAFT 173 EKRH+NIPAH+SPCFRV++GD VIIGQCRPLSKT+RFNVL+VIP AG++G KK+F+ Sbjct: 101 EKRHTNIPAHVSPCFRVRDGDTVIIGQCRPLSKTIRFNVLRVIPQAGATG--KKSFS 155
BLAST of CX298268 vs. ExPASy Swiss-Prot
Match: RS11_DICDI (40S ribosomal protein S11 OS=Dictyostelium discoideum GN=rps11 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.639e-15 Identity = 39/55 (70.91%), Postives = 43/55 (78.18%), Query Frame = 3 Query: 6 EKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 170 EKRHSNIPAH+SP F VKEGD V IGQCRPLSKTVRFNV+K + +S KAF Sbjct: 101 EKRHSNIPAHVSPAFNVKEGDSVTIGQCRPLSKTVRFNVIKHDISAASKKQFKAF 155
BLAST of CX298268 vs. ExPASy Swiss-Prot
Match: RS11_YEAST (40S ribosomal protein S11 OS=Saccharomyces cerevisiae GN=RPS11A PE=1 SV=3) HSP 1 Score: 74.3294 bits (181), Expect = 2.136e-13 Identity = 34/55 (61.82%), Postives = 43/55 (78.18%), Query Frame = 3 Query: 6 EKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAF 170 EKRH N+P H+SP FRV+ GD V +GQCRP+SKTVRFNV+KV + ++G A K F Sbjct: 101 EKRHKNVPVHVSPAFRVQVGDIVTVGQCRPISKTVRFNVVKV--SAAAGKANKQF 153
BLAST of CX298268 vs. ExPASy Swiss-Prot
Match: RS11_SCHPO (40S ribosomal protein S11 OS=Schizosaccharomyces pombe GN=rps11a PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 4.758e-13 Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 3 Query: 6 EKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVI 134 EKRH N+ AH+SP FR+ EGD V +GQCRPLSKTVRFNVL+V+ Sbjct: 98 EKRHKNLAAHVSPAFRINEGDVVTVGQCRPLSKTVRFNVLRVV 140 The following BLAST results are available for this feature:
BLAST of CX298268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298268 ID=CX298268; Name=CX298268; organism=Citrus clementina; type=EST; length=323bpback to top |