CX298298
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX298298 vs. ExPASy Swiss-Prot
Match: PFD2_SCHPO (Probable prefoldin subunit 2 OS=Schizosaccharomyces pombe GN=SPAC227.10 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.887e-26 Identity = 55/109 (50.46%), Postives = 81/109 (74.31%), Query Frame = 3 Query: 54 PKKQQELQHQYTNFKNTLQQLAQKIGDIEQEAEEHKLVIETLDPLPADRKCFRMVNGVLVERTVKDVLPTLKTNSDGLKQVLEDMLKQYKSKQGELDNWKKKNNIQVVQ 380 P +QQ LQ QY ++K+ LQQ+AQKI D+E +A+EHKLV++TL+ + +R+CFRM++GVLVERTV V+P LKT +G++ + +L QYK + E ++K N IQVV+ Sbjct: 5 PSRQQILQTQYNSYKSRLQQIAQKIVDLETDADEHKLVMDTLNSMDNNRRCFRMIHGVLVERTVGTVVPILKTTQEGIQTAMNGLLDQYKQLEAEFQKFQKDNKIQVVR 113
BLAST of CX298298 vs. ExPASy Swiss-Prot
Match: PFD2_ARATH (Probable prefoldin subunit 2 OS=Arabidopsis thaliana GN=At3g22480 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.490e-19 Identity = 41/110 (37.27%), Postives = 69/110 (62.73%), Query Frame = 3 Query: 51 DPKKQQELQHQYTNFKNTLQQLAQKIGDIEQEAEEHKLVIETLDPLPADRKCFRMVNGVLVERTVKDVLPTLKTNSDGLKQVLEDMLKQYKSKQGELDNWKKKNNIQVVQ 380 +P +Q + + Y ++ L Q+ I D+E + EH LVI + PL RKCFRM+ GVLVERT+K+VLP ++ N DGL++V+ + + + K+ +L ++ K I++ + Sbjct: 12 EPPNEQAVLNMYEGKRSELSQIYSNITDLEMQVSEHSLVINAIQPLDQSRKCFRMIGGVLVERTIKEVLPAVQRNKDGLEEVVRKLYETLEKKKKDLTEFEAKYKIRITK 121
BLAST of CX298298 vs. ExPASy Swiss-Prot
Match: PFD2_HUMAN (Prefoldin subunit 2 OS=Homo sapiens GN=PFDN2 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.601e-17 Identity = 40/98 (40.82%), Postives = 68/98 (69.39%), Query Frame = 3 Query: 84 YTNFKNTLQQLAQKIGDIEQEAEEHKLVIETLDPLPADRKCFRMVNGVLVERTVKDVLPTLKTNSDGLKQVLEDMLKQYKSKQGELDNWKKKNNIQVV 377 + + + LA K ++E E EH LVI+TL + RKC+RMV GVLVERTVK+VLP L+ N + +++++E + +Q ++K EL+ +++K+NI+++ Sbjct: 30 FNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKCYRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLM 127
BLAST of CX298298 vs. ExPASy Swiss-Prot
Match: PFD2_BOVIN (Prefoldin subunit 2 OS=Bos taurus GN=PFDN2 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.601e-17 Identity = 40/98 (40.82%), Postives = 68/98 (69.39%), Query Frame = 3 Query: 84 YTNFKNTLQQLAQKIGDIEQEAEEHKLVIETLDPLPADRKCFRMVNGVLVERTVKDVLPTLKTNSDGLKQVLEDMLKQYKSKQGELDNWKKKNNIQVV 377 + + + LA K ++E E EH LVI+TL + RKC+RMV GVLVERTVK+VLP L+ N + +++++E + +Q ++K EL+ +++K+NI+++ Sbjct: 30 FNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKCYRMVGGVLVERTVKEVLPALENNKEQIQKIIETLTQQLQAKGKELNEFREKHNIRLM 127
BLAST of CX298298 vs. ExPASy Swiss-Prot
Match: PFD2_RAT (Prefoldin subunit 2 OS=Rattus norvegicus GN=Pfdn2 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.567e-17 Identity = 40/98 (40.82%), Postives = 68/98 (69.39%), Query Frame = 3 Query: 84 YTNFKNTLQQLAQKIGDIEQEAEEHKLVIETLDPLPADRKCFRMVNGVLVERTVKDVLPTLKTNSDGLKQVLEDMLKQYKSKQGELDNWKKKNNIQVV 377 + + + LA K ++E E EH LVI+TL + RKC+RMV GVLVERTVK+VLP L+ N + +++++E + +Q ++K EL+ +++K+NI+++ Sbjct: 30 FNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKCYRMVGGVLVERTVKEVLPALEGNKEQIQKIIETLSQQLQAKGKELNEFREKHNIRLM 127
BLAST of CX298298 vs. ExPASy Swiss-Prot
Match: PFD2_MOUSE (Prefoldin subunit 2 OS=Mus musculus GN=Pfdn2 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 3.567e-17 Identity = 40/98 (40.82%), Postives = 68/98 (69.39%), Query Frame = 3 Query: 84 YTNFKNTLQQLAQKIGDIEQEAEEHKLVIETLDPLPADRKCFRMVNGVLVERTVKDVLPTLKTNSDGLKQVLEDMLKQYKSKQGELDNWKKKNNIQVV 377 + + + LA K ++E E EH LVI+TL + RKC+RMV GVLVERTVK+VLP L+ N + +++++E + +Q ++K EL+ +++K+NI+++ Sbjct: 30 FNRLRQEQRGLASKAAELEMELNEHSLVIDTLKEVDETRKCYRMVGGVLVERTVKEVLPALEGNKEQIQKIIETLSQQLQAKGKELNEFREKHNIRLM 127
BLAST of CX298298 vs. ExPASy Swiss-Prot
Match: PFD2_DROME (Probable prefoldin subunit 2 OS=Drosophila melanogaster GN=l(3)01239 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.944e-16 Identity = 40/115 (34.78%), Postives = 66/115 (57.39%), Query Frame = 3 Query: 30 MSSQKQIDPKKQQELQHQYTNFKNTLQQLAQKIGDIEQEAEEHKLVIETLDPLPADRKCFRMVNGVLVERTVKDVLPTLKTNSDGLKQVLEDMLKQYKSKQGELDNWKKKNNIQV 374 MS++ Q+ + Q+ +N + L + +E + EHK VIETL+ +RKCFR + GVL ERTVK+VLP L N D + + ++ + K EL+ +K+++NI++ Sbjct: 1 MSTESAKPALSQEAIVAQFQQLRNEQRNLVNSLNTLEMDLREHKTVIETLEAADPERKCFRQIGGVLCERTVKEVLPQLVENKDFIAKTIQMVTNDLSKKGSELNKFKEEHNIKI 115
BLAST of CX298298 vs. ExPASy Swiss-Prot
Match: PFD2_DICDI (Probable prefoldin subunit 2 OS=Dictyostelium discoideum GN=pfdn2 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.727e-16 Identity = 46/115 (40.00%), Postives = 72/115 (62.61%), Query Frame = 3 Query: 30 MSSQKQIDPKKQQELQHQYTNFKNTLQQLAQKIGDIEQEAEEHKLVIETLDPLPADRKCFRMVNGVLVERTVKDVLPTLKTNSDGLKQVLEDMLKQYKSKQGELDNWKKKNNIQV 374 MS QKQ + Q ++H Y + K+ QQ+ +I + E + E+ LVI + L ++RKCFRMV GVLVERTV +VLP +K N DG+K+V++ + + K EL+++ I++ Sbjct: 1 MSQQKQ-QLTENQIIEH-YKDLKSQQQQIISRISEFESDVGEYGLVINAIQNLESNRKCFRMVGGVLVERTVGEVLPQIKQNRDGIKEVVKKLDENLSIKTKELNDFVALYKIKI 113
BLAST of CX298298 vs. ExPASy Swiss-Prot
Match: PFD2_YEAST (Prefoldin subunit 2 OS=Saccharomyces cerevisiae GN=GIM4 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 4.821e-14 Identity = 37/108 (34.26%), Postives = 60/108 (55.56%), Query Frame = 3 Query: 57 KKQQELQHQYTNFKNTLQQLAQKIGDIEQEAEEHKLVIETLDPLPADRKCFRMVNGVLVERTVKDVLPTLKTNSDGLKQVLEDMLKQYKSKQGELDNWKKKNNIQVVQ 380 ++ Q +Y +K L++L KI ++ + +EH +VI+TL RKC+RM+ G LVE V+ LP L+T + ++ + M + E + WKK N IQVV+ Sbjct: 3 QRNNVFQAKYNEYKQILEELQTKIIELGHDKDEHTIVIKTLKDAEPTRKCYRMIGGALVESDVQTSLPILETKKENIEGTISKMKETLIQTAKEFEKWKKDNKIQVVK 110
BLAST of CX298298 vs. ExPASy Swiss-Prot
Match: PFD2_CAEEL (Probable prefoldin subunit 2 OS=Caenorhabditis elegans GN=tag-355 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.239e-11 Identity = 39/120 (32.50%), Postives = 69/120 (57.50%), Query Frame = 3 Query: 18 QTAIMSSQKQIDPKKQQELQHQYTNFKNTLQQLAQKIGDIEQEAEEHKLVIETLDPLPADRKCFRMVNGVLVERTVKDVLPTLKTNSDGLKQVLEDMLKQYKSKQGELDNWKKKNNIQVV 377 QTA + +Q ++Q+++ ++ ++ Q +A ++ IE+E E V+E + L D+KCFR+++ LVE TVKDV+P L+ N L V + + Q K EL+ K +NI+++ Sbjct: 5 QTAAATPAEQ---EEQRKVVEKFKALRDQQQDIAAEVTRIEEERREFGRVLEVIKDLEPDQKCFRLISDTLVEYTVKDVIPDLQNNIANLTIVSKQLNDQLVEKGKELNTHKTTHNIRLL 121 The following BLAST results are available for this feature:
BLAST of CX298298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX298298 ID=CX298298; Name=CX298298; organism=Citrus clementina; type=EST; length=543bpback to top |