CX298309

Overview
NameCX298309
Unique NameCX298309
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10237 contig Ccv1_Contig10237:507..1217. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX298309 vs. ExPASy Swiss-Prot
Match: OPR1_SOLLC (12-oxophytodienoate reductase 1 OS=Solanum lycopersicum GN=OPR1 PE=1 SV=1)

HSP 1 Score: 410.609 bits (1054), Expect = 4.135e-114
Identity = 190/234 (81.20%), Postives = 217/234 (92.74%), Query Frame = 3
Query:    6 LTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYTDYP 707
            LTPQIR+NG+DIA FT PRRLTTDEIPQIVN+FR+AARNAIEAGFDG+E+HGAHG+LIDQFMKDQVNDR+D+YGGSLENRCRFALEIVEAV+NEIG+DRVGIR+SPFA+Y E+GD+NP ALGLYM ESLNKY + YCH+VEPRMKT  EK EC  SL+PMRKA+KGTF+VAGGYDREDGN+A+ E RADLV YGRLF++NPDLP+RFE NAPLNKYNR+TFY SDP+VGYTDYP
Sbjct:  137 LTPQIRSNGIDIAHFTRPRRLTTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGYDREDGNRALIEDRADLVAYGRLFISNPDLPKRFELNAPLNKYNRDTFYTSDPIVGYTDYP 370          
BLAST of CX298309 vs. ExPASy Swiss-Prot
Match: OPR2_ARATH (12-oxophytodienoate reductase 2 OS=Arabidopsis thaliana GN=OPR2 PE=2 SV=2)

HSP 1 Score: 403.675 bits (1036), Expect = 5.055e-112
Identity = 184/235 (78.30%), Postives = 216/235 (91.91%), Query Frame = 3
Query:    3 PLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYTDYP 707
            P+ PQ+R NG+D A+FTPPRRL+ +EIP IVNDFRLAARNA+EAGFDG+E+HGAHG+LIDQFMKD+VNDRTD+YGGSL+NRC+FALE+V+AV+ EIG DRVGIRLSPFA+YMESGD+NPEALGLYM ESLNKYGILYCHM+EPRMKTVGE + C H+L+PMR+AFKGTF+ AGG+ REDGN+A+A+GR DLV YGR FLANPDLP+RF+ +APLNKYNR TFY SDPVVGYTDYP
Sbjct:  134 PIMPQMRANGIDEARFTPPRRLSIEEIPGIVNDFRLAARNAMEAGFDGVEIHGAHGYLIDQFMKDKVNDRTDEYGGSLQNRCKFALEVVDAVAKEIGPDRVGIRLSPFADYMESGDTNPEALGLYMVESLNKYGILYCHMIEPRMKTVGEIAACSHTLMPMREAFKGTFISAGGFTREDGNEAVAKGRTDLVAYGRWFLANPDLPKRFQLDAPLNKYNRSTFYTSDPVVGYTDYP 368          
BLAST of CX298309 vs. ExPASy Swiss-Prot
Match: OPR1_ARATH (12-oxophytodienoate reductase 1 OS=Arabidopsis thaliana GN=OPR1 PE=1 SV=2)

HSP 1 Score: 392.119 bits (1006), Expect = 1.522e-108
Identity = 182/235 (77.45%), Postives = 212/235 (90.21%), Query Frame = 3
Query:    3 PLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYTDYP 707
            PL PQIR+NG+D A FTPPRRL  +EIP IVNDFRLAARNA+EAGFDG+E+HGA+G+LIDQFMKD VNDRTD+YGGSL+NRC+F LEIV+AV+ EIG DRVGIRLSPFA+YMESGD+NP ALGLYMAESLNKYGILYCH++E RMKT+GE   CPH+L+PMRKAFKGTF+ AGG+ REDGN+A+++GR DLV YGR FLANPDLP+RF+ +APLNKY+R TFY SDPVVGYTDYP
Sbjct:  132 PLMPQIRSNGIDEALFTPPRRLGIEEIPGIVNDFRLAARNAMEAGFDGVEIHGANGYLIDQFMKDTVNDRTDEYGGSLQNRCKFPLEIVDAVAKEIGPDRVGIRLSPFADYMESGDTNPGALGLYMAESLNKYGILYCHVIEARMKTMGEVHACPHTLMPMRKAFKGTFISAGGFTREDGNEAVSKGRTDLVAYGRWFLANPDLPKRFQVDAPLNKYDRPTFYTSDPVVGYTDYP 366          
BLAST of CX298309 vs. ExPASy Swiss-Prot
Match: OPRL1_ARATH (Putative 12-oxophytodienoate reductase-like protein 1 OS=Arabidopsis thaliana GN=At1g09400 PE=2 SV=2)

HSP 1 Score: 345.895 bits (886), Expect = 1.251e-94
Identity = 162/202 (80.20%), Postives = 181/202 (89.60%), Query Frame = 3
Query:   45 QFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEFNAPLNK 650
            +FTPPRRL TDEIP I+NDFRLAARNA EAGFDG+E+HGAHG+LIDQFMKD VNDRTD YGGSLENRCRFAL+++EAVS EIG DRVGIRLSPFA+YMESGD++P+ LGLYMA+SLN++ ILYCHM+EPRMKTV E  EC  SL PMR AF GTF+VAGGY REDGNKA+AEGR DLV YGRLFLANPDLP+RFE NAPLNK
Sbjct:  123 EFTPPRRLRTDEIPTIINDFRLAARNATEAGFDGVEIHGAHGYLIDQFMKDSVNDRTDSYGGSLENRCRFALQVIEAVSKEIGPDRVGIRLSPFADYMESGDTDPKRLGLYMAKSLNRFEILYCHMIEPRMKTVSEIFECRESLTPMRNAFNGTFIVAGGYTREDGNKAVAEGRTDLVAYGRLFLANPDLPKRFELNAPLNK 324          
BLAST of CX298309 vs. ExPASy Swiss-Prot
Match: OPRL_SOLLC (12-oxophytodienoate reductase-like protein OS=Solanum lycopersicum GN=OPR2 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 5.114e-72
Identity = 136/218 (62.39%), Postives = 170/218 (77.98%), Query Frame = 3
Query:   57 PRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHG-FLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGILYCHMVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYTDYP 707
            P  L +D+IP IVNDFR+AARNAI+AGFDGIE++ + G +LID+FM DQV+  TD+Y  S+++RCR ALEIVEAV+NEIGAD++GI+LSPF       DSN EAL  YMA  L+K G+LY H++EPR +TV        SLLP+RKAFKGT + +GGY + DG KAI E  ADL+ +GR+FLANPDLP+RFE NAPLNKYNR TFY +DP++GYTDYP
Sbjct:  142 PLPLESDKIPCIVNDFRIAARNAIKAGFDGIEINASSGGYLIDEFMNDQVHGWTDEYDESIKDRCRLALEIVEAVANEIGADKIGIKLSPFDG---KKDSNSEALATYMANELSKLGVLYLHVMEPR-ETVNR------SLLPIRKAFKGTLIASGGYGKSDGEKAIDENYADLISFGRMFLANPDLPKRFEVNAPLNKYNRSTFYTNDPIIGYTDYP 349          
BLAST of CX298309 vs. ExPASy Swiss-Prot
Match: OPR3_SOLLC (12-oxophytodienoate reductase 3 OS=Solanum lycopersicum GN=OPR3 PE=1 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 9.027e-69
Identity = 127/234 (54.27%), Postives = 169/234 (72.22%), Query Frame = 3
Query:   48 FTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY------GILYCHMVEPRMKT--------VGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYTDYP 707
            +  PR + T EI Q+V D+R +A NAIEAGFDGIE+HGAHG+LIDQF+KD +NDRTD+YGGSL NRC+F  ++V+AV + IGADRVG+R+SP  +++++ DSNP +LGL + E LNK        + Y H+ +PR           +G + E    +  +R A++GTF+ +GGY RE G +A+A+G ADLV YGRLF++NPDL  R + NAPLNKYNR+TFY  DPVVGYTDYP
Sbjct:  149 YPKPRAIGTYEISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFICSGGYTRELGIEAVAQGDADLVSYGRLFISNPDLVMRIKLNAPLNKYNRKTFYTQDPVVGYTDYP 382          
BLAST of CX298309 vs. ExPASy Swiss-Prot
Match: OPR3_ARATH (12-oxophytodienoate reductase 3 OS=Arabidopsis thaliana GN=OPR3 PE=1 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 5.126e-64
Identity = 119/235 (50.64%), Postives = 163/235 (69.36%), Query Frame = 3
Query:   45 QFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKY------GILYCHMVEPRMKTVGE--------KSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYTDYP 707
            ++  PR L   EIP++V D+ L+A NAI AGFDGIE+HGAHG+LIDQF+KD +NDRTDQYGGS+ NRCRF  ++VE V + IGA +VG+R+SP  +++++ DS+P +LGL +   LNK        + Y H+ +PR    G+          E    +  +R A+ GTF+ +GG+++E G +A+ +G ADLV YGRLF+ANPDL  RF+ +  LNKYNR+TFY  DPVVGYTDYP
Sbjct:  149 KYPKPRALEASEIPRVVEDYCLSALNAIRAGFDGIEIHGAHGYLIDQFLKDGINDRTDQYGGSIANRCRFLKQVVEGVVSAIGASKVGVRVSPAIDHLDATDSDPLSLGLAVVGMLNKLQGVNGSKLAYLHVTQPRYHAYGQTESGRQGSDEEEAKLMKSLRMAYNGTFMSSGGFNKELGMQAVQQGDADLVSYGRLFIANPDLVSRFKIDGELNKYNRKTFYTQDPVVGYTDYP 383          
BLAST of CX298309 vs. ExPASy Swiss-Prot
Match: OPRL2_ARATH (Putative 12-oxophytodienoate reductase-like protein 2 OS=Arabidopsis thaliana GN=At1g17990 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.680e-55
Identity = 97/121 (80.17%), Postives = 116/121 (95.87%), Query Frame = 3
Query:   45 QFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDSNPEALGLYMAESLNKYGI 407
            QF PPRRL +DE+P IVNDFR+AARNAIEAGFDG+E+HGAHG+LIDQF+KD+VNDR+DQYGGSLENRCRFALE++EAV NEIG+DRVGIRLSPFA+YMESGDSNPEALGLY+ +++NK+G+
Sbjct:  138 QFKPPRRLRSDELPAIVNDFRIAARNAIEAGFDGVEVHGAHGYLIDQFLKDKVNDRSDQYGGSLENRCRFALEVIEAVVNEIGSDRVGIRLSPFADYMESGDSNPEALGLYLVQAMNKHGM 258          
BLAST of CX298309 vs. ExPASy Swiss-Prot
Match: NEMA_ECOLI (N-ethylmaleimide reductase OS=Escherichia coli (strain K12) GN=nemA PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.392e-45
Identity = 103/218 (47.25%), Postives = 126/218 (57.80%), Query Frame = 3
Query:   57 PRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYMESGDS-NPEALGLYMAESLNKYGILYCHMVEPRMKTVGEKSECPHSLLPMRKAFKGTFLVAGGYDREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYTDYP 707
            PR L  +EIP IVNDFR A  NA EAGFD +ELH AHG+L+ QF+    N RTDQYGGS+ENR R  LE+V+A   E GADR+GIR+SP   +  + +  N EA  LY+ E L K GI Y HM EP     G +         +R  F G  + AG Y  E     I +G  D V +GR ++ANPDL  R +  A LN    E+FY      GYTDYP
Sbjct:  149 PRALELEEIPGIVNDFRQAIANAREAGFDLVELHSAHGYLLHQFLSPSSNHRTDQYGGSVENRARLVLEVVDAGIEEWGADRIGIRVSPIGTFQNTDNGPNEEADALYLIEQLGKRGIAYLHMSEP--DWAGGEPYTDAFREKVRARFHGPIIGAGAYTVEKAETLIGKGLIDAVAFGRDWIANPDLVARLQRKAELNPQRAESFY-GGGAEGYTDYP 363          
BLAST of CX298309 vs. ExPASy Swiss-Prot
Match: OYE3_YEAST (NADPH dehydrogenase 3 OS=Saccharomyces cerevisiae GN=OYE3 PE=1 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 3.699e-38
Identity = 95/230 (41.30%), Postives = 134/230 (58.26%), Query Frame = 3
Query:   66 LTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLIDQFMKDQVNDRTDQYGGSLENRCRFALEIVEAVSNEIGADRVGIRLSPFANYME-SGDSNPEALGLYM-----AESLNKYG--ILYCHMVEPR------MKTVGEKSECPHSLLPMRKAFKGTFLVAGGY--DREDGNKAIAEGRADLVVYGRLFLANPDLPRRFEFNAPLNKYNRETFYVSDPVVGYTDYP 707
            LT D+I Q + D+  AA+N+I AG DG+E+H A+G+L++QF+    N RTD+YGG++ENR RF LE+V+A+   IG +RVG+RLSP+  +   SG + P  +  Y       E   K G  + + H+VEPR      ++  GE SE  +        +KG  + AG Y    E   + + + R  L+ YGR F++NPDL  R E   PLNKY+R TFY      GYTDYP
Sbjct:  162 LTKDDIKQYIKDYIHAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNKRTDEYGGTIENRARFTLEVVDALIETIGPERVGLRLSPYGTFNSMSGGAEPGIIAQYSYVLGELEKRAKAGKRLAFVHLVEPRVTDPSLVEGEGEYSEGTNDF--AYSIWKGPIIRAGNYALHPEVVREQVKDPRT-LIGYGRFFISNPDLVYRLEEGLPLNKYDRSTFYTMS-AEGYTDYP 387          
The following BLAST results are available for this feature:
BLAST of CX298309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
OPR1_SOLLC4.135e-11481.2012-oxophytodienoate reductase 1 OS=Solanum lycoper... [more]
OPR2_ARATH5.055e-11278.3012-oxophytodienoate reductase 2 OS=Arabidopsis tha... [more]
OPR1_ARATH1.522e-10877.4512-oxophytodienoate reductase 1 OS=Arabidopsis tha... [more]
OPRL1_ARATH1.251e-9480.20Putative 12-oxophytodienoate reductase-like protei... [more]
OPRL_SOLLC5.114e-7262.3912-oxophytodienoate reductase-like protein OS=Sola... [more]
OPR3_SOLLC9.027e-6954.2712-oxophytodienoate reductase 3 OS=Solanum lycoper... [more]
OPR3_ARATH5.126e-6450.6412-oxophytodienoate reductase 3 OS=Arabidopsis tha... [more]
OPRL2_ARATH5.680e-5580.17Putative 12-oxophytodienoate reductase-like protei... [more]
NEMA_ECOLI2.392e-4547.25N-ethylmaleimide reductase OS=Escherichia coli (st... [more]
OYE3_YEAST3.699e-3841.30NADPH dehydrogenase 3 OS=Saccharomyces cerevisiae ... [more]

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Properties
Property NameValue
Genbank descriptionC06010G11SK RindPdig24 Citrus clementina cDNA clone C06010G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298309 ID=CX298309; Name=CX298309; organism=Citrus clementina; type=EST; length=708bp
AGCCATTGACACCTCAAATCCGCACTAATGGTGTTGATATTGCACAATTC
ACTCCTCCAAGGCGGCTAACGACAGATGAAATCCCTCAAATTGTGAATGA
TTTCAGGCTTGCTGCAAGAAATGCAATTGAGGCTGGTTTCGATGGCATTG
AGCTCCACGGTGCACATGGCTTCCTAATTGACCAATTTATGAAGGATCAA
GTGAATGATCGAACAGACCAGTATGGAGGATCCTTAGAGAACCGTTGCCG
TTTTGCTTTAGAAATAGTTGAAGCTGTTTCCAATGAAATAGGGGCAGATA
GGGTTGGGATAAGACTATCTCCGTTTGCAAACTATATGGAATCAGGGGAC
TCTAACCCAGAAGCTTTAGGTCTTTACATGGCAGAATCCTTGAACAAATA
CGGTATCCTCTATTGTCACATGGTTGAGCCGAGGATGAAAACAGTTGGAG
AAAAATCTGAATGTCCTCACAGTTTGCTGCCCATGAGAAAGGCTTTCAAG
GGTACTTTTCTTGTCGCTGGGGGTTATGACAGGGAAGATGGAAACAAAGC
TATTGCTGAAGGCCGTGCAGATCTTGTTGTTTATGGTCGCTTGTTCTTGG
CTAATCCAGATTTACCCAGGAGATTTGAGTTCAATGCCCCCCTCAATAAG
TACAACAGAGAAACATTCTATGTTTCCGATCCTGTTGTTGGTTACACGGA
TTATCCCT
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