CX298315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX298315 vs. ExPASy Swiss-Prot
Match: DCAM_IPONI (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea nil GN=SAMDC PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 5.985e-46 Identity = 81/130 (62.31%), Postives = 103/130 (79.23%), Query Frame = 2 Query: 5 AEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRADCSTSPRSILKCCWS 394 ++ICDF+F+PCGYSMN++EG +STIHVTPEDGFSYASFEA+GYDF+ V L L++RVL+CF+PAEFSVALH D +G++ F LD+KGY+CGE+ YE LG GS++Y F+ SPRS L CCWS Sbjct: 221 SDICDFDFEPCGYSMNAVEGGTISTIHVTPEDGFSYASFEAMGYDFKDVNLDALIQRVLSCFQPAEFSVALHCDSIGEKLDSVFELDVKGYACGERSYEALGKGGSIMYCGFTSTGSCGSPRSTLLCCWS 350
BLAST of CX298315 vs. ExPASy Swiss-Prot
Match: DCAM_IPOBA (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea batatas GN=SAMDC PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.274e-45 Identity = 81/130 (62.31%), Postives = 102/130 (78.46%), Query Frame = 2 Query: 5 AEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRADCSTSPRSILKCCWS 394 +EICDF+F+PCGYSMN++EG A+S IHVTPEDGFSYASFEA+GYDF+ V L L++RVL+CF+PAEFSVALH D +G++ F LD+KGY+CGE+ YE L GS++Y F+ SPRS L CCWS Sbjct: 221 SEICDFDFEPCGYSMNAVEGGAISPIHVTPEDGFSYASFEAMGYDFKDVNLDALIQRVLSCFQPAEFSVALHCDSIGEKLDSVFKLDVKGYACGERSYEGLNKGGSIMYCGFTSTGSCGSPRSTLLCCWS 350
BLAST of CX298315 vs. ExPASy Swiss-Prot
Match: DCAM_CATRO (S-adenosylmethionine decarboxylase proenzyme OS=Catharanthus roseus GN=SAMDC PE=1 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.129e-43 Identity = 85/130 (65.38%), Postives = 97/130 (74.62%), Query Frame = 2 Query: 2 EAEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRADCSTSPRSILKCCW 391 ++EICDFEFDPCGYSMNSIE A+STIHVTPEDGFSYASFEA GYD + L ++ERVLACF+P+EFSVA+H D+ L+LK YS EKI EELG GS+IY F R D SPRSILKCCW Sbjct: 220 DSEICDFEFDPCGYSMNSIEEAAISTIHVTPEDGFSYASFEAAGYDLKAQNLGMMIERVLACFQPSEFSVAVHCDVTCKSLEQICSLELKEYSLDEKINEELGLGGSIIYKKFLRIDACGSPRSILKCCW 349
BLAST of CX298315 vs. ExPASy Swiss-Prot
Match: DCAM_DATST (S-adenosylmethionine decarboxylase proenzyme OS=Datura stramonium GN=SAMDC PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.074e-42 Identity = 79/129 (61.24%), Postives = 99/129 (76.74%), Query Frame = 2 Query: 5 AEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRADCSTSPRSILKCCW 391 +EICDFEF+PCGYSMNSIEG AVSTIH+TPEDGFSYASFE+VGYD + ++L PL+ERVLACF+PAEFS+ALH+D+ +D+KGYS E EE G GS++Y F++ SP+S+LK CW Sbjct: 223 SEICDFEFEPCGYSMNSIEGAAVSTIHITPEDGFSYASFESVGYDLKTMELGPLVERVLACFEPAEFSIALHADVATKLLERVCCVDVKGYSLAEWSPEEFGKGGSIVYQKFTKTPYCASPKSVLKGCW 351
BLAST of CX298315 vs. ExPASy Swiss-Prot
Match: DCAM_TOBAC (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana tabacum GN=SAMDC PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.015e-42 Identity = 80/129 (62.02%), Postives = 98/129 (75.97%), Query Frame = 2 Query: 5 AEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRADCSTSPRSILKCCW 391 +EICDFEF+PCGYSMNSIEG A+STIH+TPEDGFSYASFEAVGYD + +KL PL+ERVLACF+P EFS+ALH+D+ +D+KGYS E EE G GS++Y F+R SP+S+LK CW Sbjct: 223 SEICDFEFEPCGYSMNSIEGAALSTIHITPEDGFSYASFEAVGYDMKTMKLGPLVERVLACFEPDEFSIALHADVATKLLERVCSVDVKGYSLAEWSPEEFGKGGSIVYQKFTRTPFCGSPKSVLKGCW 351
BLAST of CX298315 vs. ExPASy Swiss-Prot
Match: DCAM_NICSY (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana sylvestris GN=SAMDC1 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.015e-42 Identity = 80/129 (62.02%), Postives = 98/129 (75.97%), Query Frame = 2 Query: 5 AEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRADCSTSPRSILKCCW 391 +EICDFEF+PCGYSMNSIEG A+STIH+TPEDGFSYASFEAVGYD + +KL PL+ERVLACF+P EFS+ALH+D+ +D+KGYS E EE G GS++Y F+R SP+S+LK CW Sbjct: 223 SEICDFEFEPCGYSMNSIEGAALSTIHITPEDGFSYASFEAVGYDMKTMKLGPLVERVLACFEPDEFSIALHADVATKLLERVCSVDVKGYSLAEWSPEEFGKGGSIVYQKFTRTPFCGSPKSVLKGCW 351
BLAST of CX298315 vs. ExPASy Swiss-Prot
Match: DCAM_SOLCI (S-adenosylmethionine decarboxylase proenzyme OS=Solanum chilense GN=SAMDC PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 8.944e-42 Identity = 80/128 (62.50%), Postives = 97/128 (75.78%), Query Frame = 2 Query: 8 EICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRADCSTSPRSILKCCW 391 EICDFEF+PCGYSMNSIEG AVSTIH+TPEDGFSYASFE+VGYD + +L PL+ERVLACF+PAEFS+ALH+D+ +D+KGYS E EE G GS++Y F+R SP+S+LK CW Sbjct: 222 EICDFEFEPCGYSMNSIEGAAVSTIHITPEDGFSYASFESVGYDPKTTELGPLVERVLACFEPAEFSIALHADVATKLLERVCSVDVKGYSLAEWSPEEFGKGGSIVYQKFTRTPYCESPKSVLKGCW 349
BLAST of CX298315 vs. ExPASy Swiss-Prot
Match: DCAM_SOLTU (S-adenosylmethionine decarboxylase proenzyme OS=Solanum tuberosum GN=SAMDC PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.399e-41 Identity = 79/130 (60.77%), Postives = 100/130 (76.92%), Query Frame = 2 Query: 2 EAEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELGNNGSLIYYSFSRADCSTSPRSILKCCW 391 ++EICDFEF+PCGYSMNSIEG AVSTIH+TPEDGF+YASFE+VGY+ + ++L PL+ERVLACF+PAEFSVALH+D+ +D+KGYS E EE G GS++Y F+R SP+S+LK CW Sbjct: 222 KSEICDFEFEPCGYSMNSIEGAAVSTIHITPEDGFTYASFESVGYNPKTMELGPLVERVLACFEPAEFSVALHADVATKLLERICSVDVKGYSLAEWSPEEFGEGGSIVYQKFTRTPYCESPKSVLKGCW 351
BLAST of CX298315 vs. ExPASy Swiss-Prot
Match: DCAM_HELAN (S-adenosylmethionine decarboxylase proenzyme OS=Helianthus annuus GN=SAMDC PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 9.889e-41 Identity = 84/135 (62.22%), Postives = 106/135 (78.52%), Query Frame = 2 Query: 2 EAEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALH--SDIVGDEHGDTFMLDLKGYSCGEKIYEEL-GNNGSLIYYSFSRADCST-SPRSILKCCWS 394 E++ICDF+FDPCGYSMN+IEGDA+STIHVTPEDGFSYASFEAVGYDF+ + LT L+ERVLACF+P+EFSVALH ++V D + + +++KGY+ E +E L G GS++YY F+R S SPRS L CWS Sbjct: 220 ESQICDFDFDPCGYSMNAIEGDAISTIHVTPEDGFSYASFEAVGYDFKSMGLTVLIERVLACFEPSEFSVALHGNENVVKDLNLENNDVNVKGYNVEETKFEVLGGEGGSMVYYGFARGGSSCGSPRSTLHRCWS 354
BLAST of CX298315 vs. ExPASy Swiss-Prot
Match: DCAM1_ARATH (S-adenosylmethionine decarboxylase proenzyme 1 OS=Arabidopsis thaliana GN=SAMDC1 PE=2 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 1.428e-39 Identity = 77/133 (57.89%), Postives = 101/133 (75.94%), Query Frame = 2 Query: 2 EAEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLACFKPAEFSVALHSDIVGDEHGDTFMLDLKGYSCGEKIYEELG-NNGSLIYYSFSR-ADCSTSPRSILKCCWS 394 ++EICDFEF+PCGYSMNSIEGDA+STIHVTPEDGFSYASFEAVGYDF + L+ L+ RVL+CF+P +FSVA+HS + + + +DL+ Y C E+ +E LG +G+++Y +F + SPRS LKC WS Sbjct: 219 KSEICDFEFEPCGYSMNSIEGDAISTIHVTPEDGFSYASFEAVGYDFNTLDLSQLVTRVLSCFEPKQFSVAVHSSVGANSYKPEITVDLEDYGCRERTFESLGEESGTVMYQTFEKLGKYCGSPRSTLKCEWS 351 The following BLAST results are available for this feature:
BLAST of CX298315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298315 ID=CX298315; Name=CX298315; organism=Citrus clementina; type=EST; length=690bpback to top |