CX298416

Overview
NameCX298416
Unique NameCX298416
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length693
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11873 contig Ccv1_Contig11873:589..1281. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX298416 vs. ExPASy Swiss-Prot
Match: MCES1_ARATH (mRNA cap guanine-N7 methyltransferase 1 OS=Arabidopsis thaliana GN=At3g20650 PE=2 SV=1)

HSP 1 Score: 407.912 bits (1047), Expect = 2.592e-113
Identity = 190/230 (82.61%), Postives = 211/230 (91.74%), Query Frame = 1
Query:    4 SAEADLHQRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREVEGLAIGNSVYWIRLDEEFADKKFKSSRPFGIQYKFHLEDAVDCPEWIVPFHIFKSLAEEYDLELVFVKNSHEFVHEYLKKPEYIELMRRLGALGDGNQDQSTLSADEWEVAYLYLAFVLRKRGQPDGTRVSGKRDKGR 693
            + +AD HQRRKKFSFP+RL+CGDC+EV LDK+L +DAPFDICSCQFAMHYSW+TEARARRALANVSALLRPGG FIGTMPDANVIIKKLRE EGL IGNSVYWIR  EE++ KKFKSS PFGI+Y FHLEDAVDCPEWIVPF++FKSLAEEYDLELVFVKNSHEFVHEY+KKPE++ELMRRLGALGDG+ DQSTLSADEWE AYLYL+FVLRKRG+ DG R SG+R  G+
Sbjct:  128 NGDADHHQRRKKFSFPSRLLCGDCFEVELDKILEEDAPFDICSCQFAMHYSWTTEARARRALANVSALLRPGGVFIGTMPDANVIIKKLREAEGLEIGNSVYWIRFGEEYSQKKFKSSSPFGIEYVFHLEDAVDCPEWIVPFNVFKSLAEEYDLELVFVKNSHEFVHEYMKKPEFVELMRRLGALGDGSNDQSTLSADEWEAAYLYLSFVLRKRGESDGARRSGRRKNGK 357          
BLAST of CX298416 vs. ExPASy Swiss-Prot
Match: MCES1_ORYSJ (mRNA cap guanine-N7 methyltransferase 1 OS=Oryza sativa subsp. japonica GN=Os08g0180000 PE=2 SV=1)

HSP 1 Score: 376.711 bits (966), Expect = 6.400e-104
Identity = 176/223 (78.92%), Postives = 195/223 (87.44%), Query Frame = 1
Query:   25 QRRKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREVEGLAIGNSVYWIRLDEEFADKKFKSSRPFGIQYKFHLEDAVDCPEWIVPFHIFKSLAEEYDLELVFVKNSHEFVHEYLKKPEYIELMRRLGALGDGNQDQSTLSADEWEVAYLYLAFVLRKRGQPDGTRVSGKRDKGR 693
            QRRKKFSFPARLIC DCYE  LD+ L +DAPFDICSCQFA+HYSWSTEARAR+ALANVSALLRPGG FIGTMPDANVIIK+LRE +G+  GN VYWI   EE+A+KKF +SRPFGI+YKFHLEDAVDCPEW+VPFH+FK LAEEYDLELV  KN HEFVHEYL+KPE+ ELMRRLGALGDG QDQSTLS DEWEVAYLYLAFVLRKRGQP   R +   ++G+
Sbjct:  134 QRRKKFSFPARLICADCYEARLDEHLYEDAPFDICSCQFALHYSWSTEARARQALANVSALLRPGGVFIGTMPDANVIIKRLRETDGMEFGNGVYWISFGEEYAEKKFPASRPFGIKYKFHLEDAVDCPEWVVPFHLFKLLAEEYDLELVLTKNFHEFVHEYLQKPEFAELMRRLGALGDGRQDQSTLSQDEWEVAYLYLAFVLRKRGQPPSQRRANNANRGK 356          
BLAST of CX298416 vs. ExPASy Swiss-Prot
Match: MCES_SCHPO (mRNA cap guanine-N7 methyltransferase OS=Schizosaccharomyces pombe GN=pcm1 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.526e-33
Identity = 85/225 (37.78%), Postives = 130/225 (57.78%), Query Frame = 1
Query:    1 DSAEADLHQRRKKF-----SFPARLICGDCYEVHLDKVLA-DDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREVE--GLAIGNSVYWIRLDEEFADKKFKSSRPFGIQYKFHLEDAV-DCPEWIVPFHIFKSLAEEYDLELVFVKNSHEFVHEYLKKPEYIELMRRLGALGDGNQDQSTLSADEWEVAYLYLAFVLRKRG 648
            D AE  ++Q +K++     SF A    GDC+   ++++L  D   FD+ S QF MHY++ +E + R  L NVS  L  GG  IGT+P+++VI+K ++ ++      GN +Y +R  E    + F+   P+GIQY F+LEDAV D PE++VPF  F+++AE Y+LEL++VK   + ++E      Y  LM R+  +   N+    +   E E A  YLAF   KRG
Sbjct:  169 DIAEVSVNQAKKRYREMHASFDALFYAGDCFSSSINELLPPDQRKFDVVSLQFCMHYAFESEEKVRVLLGNVSKCLPRGGVMIGTIPNSDVIVKHIKMLKPGEKEWGNDIYKVRFPES-PPRSFRP--PYGIQYYFYLEDAVTDVPEYVVPFEAFRAVAEGYNLELIWVKPFLDILNEEKNSETYGPLMDRMKVV--DNEGHRGIGGQEKEAAGFYLAFAFEKRG 388          
BLAST of CX298416 vs. ExPASy Swiss-Prot
Match: MCES_CAEEL (mRNA cap guanine-N7 methyltransferase OS=Caenorhabditis elegans GN=tag-72 PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 3.586e-30
Identity = 81/233 (34.76%), Postives = 120/233 (51.50%), Query Frame = 1
Query:   31 RKKFSFPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREVEGLAIGNSVYWIRLD--EEFADKKFKSSRPFGIQYKFHLEDAVDCPEWIVPFHIFKSLAEEYDLELVFVKNSHEFVHEYLK------------------------KPEYIELMRRLGALGDGN--QDQSTLSADEWEVAYLYLAFVLRKR 645
            +K   F  + I  DC + +L+  + +  PFD+ SCQFA+HYS+  EA AR  L N   +L+PGG FIGT+PDA+ I+  +R  E     N V  I  +  EE A+ K      FG ++ F L++ V+CPE++  F + K L EE D+EL+FV N  E ++++L+                          EY+E   +L A  +    +   TLS  EWE   +YL F  RK+
Sbjct:  104 KKNNIFTVQFIVADCTKENLEDRIENKDPFDLVSCQFALHYSFVDEASARIFLKNAVGMLKPGGVFIGTLPDADRIVWSMRNGENGQFANEVCKITYENVEELAEGKVPL---FGAKFHFSLDEQVNCPEFLAYFPLVKHLLEELDMELLFVHNFAEAINKWLEPGRRLLESMTGLETYPNEKLSGKSDDEYLEAKAKLDAFPEDERIKTMGTLSKSEWEAICMYLVFGFRKK 333          
BLAST of CX298416 vs. ExPASy Swiss-Prot
Match: MCES_DANRE (mRNA cap guanine-N7 methyltransferase OS=Danio rerio GN=rnmt PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.780e-29
Identity = 81/230 (35.22%), Postives = 115/230 (50.00%), Query Frame = 1
Query:   43 SFPARLICGDCYEVHLDKVLAD-DAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREVEGLAIGNSVYWIRLDEEFADKKFKSSRP-FGIQYKFHLEDAVDCPEWIVPFHIFKSLAEEYDLELVFVKNSHEFVHEYLKKPEYIELMRRLGAL--------------GDGNQDQS--------------TLSADEWEVAYLYLAFVLRK 642
            +F A  I  DC    L + L D +  FD+CSCQF  HYS+ +E++A   L N    LRPGG FIGT PDA  ++K+L E +  + GN V+ +   +       K   P FG QY F LE  V+ PE++V F +F  +A++Y++ LV+ K   EF  E +K  +  +LM+ + AL              G G  D +              TLS  EWE   +YL +V  K
Sbjct:  176 TFSAEFITADCSRELLSEKLQDPELQFDVCSCQFVYHYSFESESQADTMLRNACERLRPGGFFIGTTPDAYELVKRLEESDSNSFGNEVFSVTFQK-------KGEYPLFGCQYDFSLEGVVNVPEFLVYFPLFVEMAKKYNMRLVYKKTFKEFFEEKVKDGKNKDLMQWMQALEQYPPDERGQLSSSGPGEYDHAKRKAADPAVRRPLGTLSKSEWEATSIYLVYVFEK 398          
BLAST of CX298416 vs. ExPASy Swiss-Prot
Match: MCES_CRYNE (mRNA cap guanine-N7 methyltransferase OS=Cryptococcus neoformans GN=ABD1 PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.507e-28
Identity = 78/215 (36.28%), Postives = 117/215 (54.42%), Query Frame = 1
Query:   13 ADLHQRRKKFSFPARLICGDCYEVHLDKVLADDAP----FDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREVEGLAIGNSVYWIRLDEEFADKKFKSSRPFGIQYKFHLEDAV-DCPEWIVPFHIFKSLAEEYDLELVFVKNSHEFVHEYLKKPEYIELMRRLGALGDGNQDQSTLSADEWEVAYLYLAFVLRK 642
            AD ++R  K  F A     DC+   L  VL+ +      +D  + QF MHY++   A+AR  + NVS  LR GG FIGT+P+A ++++     E L  GNS Y I    +F +++ K    +G  Y+F+L DAV D PE++V +  F SLA E  L LV+ K  HE + E     ++  L+ ++G L +    +S + AD+WE A LY+ F   K
Sbjct:  493 ADRYRRMPKPGFDAFFYAHDCFSNPLSDVLSPELQIKDLYDNVTMQFCMHYAFENAAKARMMIENVSRYLRRGGIFIGTIPNAELLLQLPDRDEELRFGNSCYSI----QFTERRHKG--VYGHDYRFYLTDAVEDVPEYLVDWENFVSLASESGLRLVYKKAFHEILQEEKDSRDFGPLLGKMGVLNE--YGESAMDADQWEAANLYMGFAFEK 699          
BLAST of CX298416 vs. ExPASy Swiss-Prot
Match: MCES_CAEBR (mRNA cap guanine-N7 methyltransferase OS=Caenorhabditis briggsae GN=tag-72 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.570e-28
Identity = 82/250 (32.80%), Postives = 123/250 (49.20%), Query Frame = 1
Query:    1 DSAEADLHQRRKKFS---------FPARLICGDCYEVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREVEGLAIGNSVYWIRLDEEFADKKFKSSRP-FGIQYKFHLEDAVDCPEWIVPFHIFKSLAEEYDLELVFVKNSHEFVHEYL------------------------KKPEYIELMRRLGALGDG-NQDQSTLSADEWEVAYLYLAFVLRKR 645
            D A+  + Q  +++          F A+ I  DC + +LD  +    PFD+ SCQFAMHYS+  E  AR  L N    L+ GG FIGT+PDA+ I+  +R        N V   ++  E  D+  + + P FG ++ F L++ V+CPE++  F + K L EE+D+EL+FV N  E +  +L                           EY+E   ++ +LGD   +   TLS  EWE   +YL F  RK+
Sbjct:   84 DVADVSIQQAEERYKTMHKYPHDIFGAQFIVADCTKENLDDKIEIKEPFDLVSCQFAMHYSFVDEDSARTFLKNAVGKLKLGGVFIGTLPDADRIVWAVRNGTEGKFANDV--CKITYEKVDELSEGNVPLFGAKFHFSLDEQVNCPEFLAYFSLVKHLLEEHDMELLFVHNFAEAITNWLVPGRRLLESMKGLETFPNRNLSGKTDEEYLEAKAKIDSLGDNVPKFVGTLSKSEWEAICMYLVFGFRKK 331          
BLAST of CX298416 vs. ExPASy Swiss-Prot
Match: MCES_MOUSE (mRNA cap guanine-N7 methyltransferase OS=Mus musculus GN=Rnmt PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.330e-27
Identity = 76/237 (32.07%), Postives = 117/237 (49.37%), Query Frame = 1
Query:   25 QRRKKFSFPARLICGDCY-EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREVEGLAIGNSVYWIRLDEEFADKKFKSSRP-FGIQYKFHLEDAVDCPEWIVPFHIFKSLAEEYDLELVFVKNSHEFVHEYLKKPEYIELMRRLGAL----------------GDGNQ------------DQSTLSADEWEVAYLYLAFVLRKR 645
            +R  +  F A  I  DC  E+ ++K    +  FD+CSCQFA HYS+ ++ +A   L N    L PGG FIGT P++  +I++L   E  + GN +Y ++  +       K + P FG +Y F+LE  VD PE++V F +   +A++Y+++L++ K   EF  E +K  E   L++R+ AL                GD                  TLS  EWE   +YL F   K+
Sbjct:  235 RRDNEHIFSAEFITADCSKELLVEKFRDPEMYFDVCSCQFACHYSFESQVQADTMLRNACGRLNPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQK-------KGNYPLFGCKYDFNLEGVVDVPEFLVYFPLLTEMAKKYNMKLIYKKTFLEFYEEKIKNNENKMLLKRMQALEQYPAHENSKLASEKVGDYTHAAEYLKKSQVRLPLGTLSKSEWEATSIYLVFAFEKQ 464          
BLAST of CX298416 vs. ExPASy Swiss-Prot
Match: MCES_RAT (mRNA cap guanine-N7 methyltransferase OS=Rattus norvegicus GN=Rnmt PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.267e-27
Identity = 76/237 (32.07%), Postives = 118/237 (49.79%), Query Frame = 1
Query:   25 QRRKKFSFPARLICGDCY-EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREVEGLAIGNSVYWIRLDEEFADKKFKSSRP-FGIQYKFHLEDAVDCPEWIVPFHIFKSLAEEYDLELVFVKNSHEFVHEYLKKPEYIELMRRLGALGD--GNQDQ--------------------------STLSADEWEVAYLYLAFVLRKR 645
            +R  ++ F A  I  DC  E+ ++K    +  FDICSCQFA HYS+ +  +A   L N    L PGG FIGT P++  +I++L   E  + GN +Y ++  +       K + P FG +Y F+LE  VD PE++V F +   +A++Y+++L++ K   EF  E +K  E   L++R+ AL     N++                            TLS  EWE   +YL F   K+
Sbjct:  231 RRDNEYIFSAEFITADCSKELLVEKFHDPEMYFDICSCQFACHYSFESLEQADMMLRNACGRLNPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQK-------KGNYPLFGCKYDFNLEGVVDVPEFLVYFPLLTEMAKKYNMKLIYKKTFLEFYEEKIKNNENKMLLKRMQALESYPANENSKLASEKAGDYAHAAEYMKNSQVRLPLGTLSKSEWEATSIYLVFAFEKQ 460          
BLAST of CX298416 vs. ExPASy Swiss-Prot
Match: MCES_MACFA (mRNA cap guanine-N7 methyltransferase OS=Macaca fascicularis GN=RNMT PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.080e-26
Identity = 76/238 (31.93%), Postives = 116/238 (48.74%), Query Frame = 1
Query:   22 HQRRKKFSFPARLICGDCY-EVHLDKVLADDAPFDICSCQFAMHYSWSTEARARRALANVSALLRPGGTFIGTMPDANVIIKKLREVEGLAIGNSVYWIRLDEEFADKKFKSSRP-FGIQYKFHLEDAVDCPEWIVPFHIFKSLAEEYDLELVFVKNSHEFVHEYLKKPEYIELMRRLGALGDGNQDQS----------------------------TLSADEWEVAYLYLAFVLRKR 645
            ++R  ++ F A  I  DC  E+ ++K       FDICSCQF  HYS+ +  +A   L N    L PGG FIGT P++  +I++L   E  + GN +Y ++  +       K   P FG +Y F+LE  VD PE++V F +   +A++Y+++LV+ K   EF  E +K  E   L++R+ AL     ++S                            TLS  EWE   +YL F   K+
Sbjct:  245 NRRDSEYIFSAEFITADCSKELLIEKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQK-------KGDYPLFGCKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTFLEFYEEKIKNNENKMLLKRMQALEPYPANESSKLVSERVDDYEHAAKYMKNSQVKLPLGTLSKSEWEATSIYLVFAFEKQ 475          
The following BLAST results are available for this feature:
BLAST of CX298416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
MCES1_ARATH2.592e-11382.61mRNA cap guanine-N7 methyltransferase 1 OS=Arabido... [more]
MCES1_ORYSJ6.400e-10478.92mRNA cap guanine-N7 methyltransferase 1 OS=Oryza s... [more]
MCES_SCHPO4.526e-3337.78mRNA cap guanine-N7 methyltransferase OS=Schizosac... [more]
MCES_CAEEL3.586e-3034.76mRNA cap guanine-N7 methyltransferase OS=Caenorhab... [more]
MCES_DANRE1.780e-2935.22mRNA cap guanine-N7 methyltransferase OS=Danio rer... [more]
MCES_CRYNE1.507e-2836.28mRNA cap guanine-N7 methyltransferase OS=Cryptococ... [more]
MCES_CAEBR2.570e-2832.80mRNA cap guanine-N7 methyltransferase OS=Caenorhab... [more]
MCES_MOUSE6.330e-2732.07mRNA cap guanine-N7 methyltransferase OS=Mus muscu... [more]
MCES_RAT8.267e-2732.07mRNA cap guanine-N7 methyltransferase OS=Rattus no... [more]
MCES_MACFA1.080e-2631.93mRNA cap guanine-N7 methyltransferase OS=Macaca fa... [more]

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Properties
Property NameValue
Genbank descriptionC06012A02SK RindPdig24 Citrus clementina cDNA clone C06012A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298416 ID=CX298416; Name=CX298416; organism=Citrus clementina; type=EST; length=693bp
GATTCGGCCGAGGCAGATCTCCATCAGCGTCGTAAAAAGTTCAGTTTTCC
TGCACGTCTAATATGTGGGGATTGTTATGAGGTTCACTTGGACAAAGTTT
TAGCAGATGATGCTCCTTTTGATATCTGCAGTTGCCAGTTTGCCATGCAT
TACTCCTGGTCTACTGAGGCTCGTGCACGCCGAGCCTTGGCCAATGTATC
TGCTTTACTTCGTCCAGGAGGCACATTCATTGGAACAATGCCAGATGCAA
ATGTGATAATTAAAAAGCTCCGAGAAGTTGAAGGACTGGCCATTGGGAAC
AGTGTCTATTGGATACGTTTGGATGAAGAGTTTGCTGATAAGAAATTTAA
ATCTTCTCGGCCCTTCGGTATCCAGTACAAGTTTCATCTAGAGGATGCTG
TTGATTGCCCAGAGTGGATTGTTCCCTTTCATATCTTCAAATCATTGGCT
GAAGAGTATGATTTGGAGCTAGTTTTTGTGAAGAACTCACATGAATTTGT
GCACGAGTACTTGAAAAAACCTGAATACATAGAACTCATGCGTAGGCTTG
GTGCCTTGGGTGATGGTAACCAAGATCAAAGCACGCTGTCAGCAGATGAG
TGGGAAGTAGCATACTTATACCTGGCATTTGTCCTCAGGAAGCGTGGCCA
ACCAGACGGGACACGGGTATCTGGAAAGAGAGATAAAGGAAGA
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