CX298419
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX298419 vs. ExPASy Swiss-Prot
Match: HIBCH_CHICK (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Gallus gallus GN=HIBCH PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.800e-25 Identity = 89/245 (36.33%), Postives = 128/245 (52.24%), Query Frame = 3 Query: 18 MGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKY----SSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAESVRAVLVDKIRI-LVDPAALEK 737 MG G+G+S HG +R+ TEKT+ AMPE IGLFPDVG Y + G +G L +TG R+ D L AG+ T +V SG L L++ L+A+ ++I LL Y D E E L + +I S FS+ S+ +I+++LK+ S +A + L+ + K +P SL LT + + A+ L V EYR++ DF E VRAVL+DK + PAALE+ Sbjct: 143 MGGGVGLSVHGHFRVATEKTVFAMPETAIGLFPDVGGGYFLPR--LSGKIGHLLALTGFRLK-GRDVLKAGIATHFVESGKLPELEKDLIAL--KSPSKENIADLLNSYHMQTKIDQEKEFVLDEHMERINSIFSA-NSMEEIVQKLKQDGS-------PFATKQLEAINKMSPTSLKLTLRQLREGAT---------MSLQDVFTMEYRLSQACMRGHDFYEGVRAVLIDKDQSPRWKPAALEE 365
BLAST of CX298419 vs. ExPASy Swiss-Prot
Match: HIBCH_HUMAN (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Homo sapiens GN=HIBCH PE=1 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 1.160e-24 Identity = 83/232 (35.78%), Postives = 124/232 (53.45%), Query Frame = 3 Query: 18 MGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQ----ITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAESVRAVLVDK 701 MG G+G+S HG++R+ TEK L AMPE IGLFPDVG Y + G +G +L +TG R+ D AG+ T +V S L L+E LLA+ ++I ++L Y ++ + + +L + I SCFS+ +V +IIE L++ SS +A E L+ + K +P SL +T + + +S L V+ EYR++ DF E VRAVL+DK Sbjct: 144 MGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQ--GKLGYFLALTGFRLK-GRDVYRAGIATHFVDSEKLAMLEEDLLAL--KSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSCFSA-NTVEEIIENLQQDGSS-------FALEQLKVINKMSPTSLKITLRQLMEGSS---------KTLQEVLTMEYRLSQACMRGHDFHEGVRAVLIDK 353
BLAST of CX298419 vs. ExPASy Swiss-Prot
Match: HIBCH_MOUSE (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Mus musculus GN=Hibch PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.584e-24 Identity = 81/232 (34.91%), Postives = 123/232 (53.02%), Query Frame = 3 Query: 18 MGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLL----LPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAESVRAVLVDK 701 MG G+G+S HG++R+ TE++L AMPE GIGLFPDVG Y + G +G +L +TG R+ D AG+ T +V S L L+E LLA+ +D+ +L Y + + + ++ + +I SCFS+ +V QIIE L++ S +A E ++ + K +P SL +T + + +S L V+ EYR+ DF E VRAVL+DK Sbjct: 143 MGGGVGLSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPRLQ--GKLGYFLALTGYRLK-GRDVHRAGIATHFVDSEKLRVLEEELLAL--KSPSAEDVAGVLESYHAKSKMDQDKSIIFEEHMDKINSCFSA-NTVEQIIENLRQDGS-------PFAIEQMKVINKMSPTSLKITLRQLMEGSS---------KTLQEVLIMEYRITQACMEGHDFHEGVRAVLIDK 352
BLAST of CX298419 vs. ExPASy Swiss-Prot
Match: HIBCH_RAT (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Rattus norvegicus GN=Hibch PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.857e-23 Identity = 79/232 (34.05%), Postives = 120/232 (51.72%), Query Frame = 3 Query: 18 MGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLL----LPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAESVRAVLVDK 701 MG G+G+S HG++R+ TE++L AMPE GIGLFPDVG Y + G +G +L +TG R+ D AG+ T +V S L L+E LLA+ +D+ +L Y + + ++ + +I SCFS+ +V QI+E L++ S +A E ++ + K +P SL +T + + L V+ EYR+ DF E VRAVL+DK Sbjct: 143 MGGGVGLSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPRLQ--GKLGYFLALTGFRLK-GRDVHRAGIATHFVDSEKLHVLEEELLAL--KSPSAEDVAGVLESYHAKSKMGQDKSIIFEEHMDKINSCFSA-NTVEQILENLRQDGS-------PFAMEQIKVINKMSPTSLKITLRQL---------MEGSTKTLQEVLTMEYRLTQACMEGHDFHEGVRAVLIDK 352
BLAST of CX298419 vs. ExPASy Swiss-Prot
Match: HIBCH_XENLA (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus laevis GN=hibch PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.312e-23 Identity = 87/233 (37.34%), Postives = 123/233 (52.79%), Query Frame = 3 Query: 18 MGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVA-LLAKY--SSDPEGEAPLKLL--LPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAESVRAVLVDK 701 MG G+G+S HG +R+ +EKTL AMPE IGLFPDVG Y + G +G YL +TG R+ SD AG+ T +V S L SL++ L+A+ + P ++ VA +L Y S + P L + +I S FS +V +I+E LK SS +A + LQ + +P SL +T + + AS L V+ EYR++ DF E VRAVL+DK Sbjct: 143 MGGGVGLSVHGHFRVASEKTLFAMPETAIGLFPDVGGGYFLPRLT--GKLGLYLALTGFRLK-GSDVQKAGIATHFVESEKLSSLEQDLVAM---KSPSKENVADVLDSYQKKSYAAQDKPFVLAENMDKINSLFSG-NTVEEIMENLKCDGSS-------FAMKQLQTLSTMSPTSLKITFRQLKEGAS---------MSLQEVLTMEYRLSQACMNGHDFYEGVRAVLIDK 352
BLAST of CX298419 vs. ExPASy Swiss-Prot
Match: HIBCH_DANRE (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Danio rerio GN=hibch PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.312e-23 Identity = 81/231 (35.06%), Postives = 113/231 (48.92%), Query Frame = 3 Query: 18 MGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFS---SEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAESVRAVLVDK 701 MG G+G+S HG++R+ TEKTL AMPE GIGLFPDVG Y + G +G +L +TG R+ D G+ T +V S + SL++ L V D+ LL Y +A +L + T S SV +I+E LKK S+ +A + + + K +P SL LT + + A L V EYR++ DF E VRAVL+DK Sbjct: 140 MGGGVGLSVHGQFRVATEKTLFAMPETGIGLFPDVGGGYFLPRLQ--GKLGLFLALTGFRLK-GRDVQRVGVATHFVQSEKIESLEKDL--VDLKSPSISDVAQLLDSYQEQSHLDAEKPFVLQEQTEAIDRLFSAGSVEEIVENLKKDGSA-------FALKQAETLAKMSPTSLKLTFRQIEEGAR---------MSLQEVFMMEYRLSQACMNGHDFYEGVRAVLIDK 349
BLAST of CX298419 vs. ExPASy Swiss-Prot
Match: HIBCH_BOVIN (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Bos taurus GN=HIBCH PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.418e-22 Identity = 82/233 (35.19%), Postives = 126/233 (54.08%), Query Frame = 3 Query: 18 MGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALL-----AKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAESVRAVLVDK 701 MG G+G+S HG++R+ TEK++ AMPE IGLFPDVG Y + G +G +L +TG R+ D AG+ T +V LG L+E LLA+ + P ++ +A + AK +D + L+ + +I S FS+ +V QI++ L++ SS +A E L+ + K +P SL +T + + +S L V+ EYR++ DF E VRAVL+DK Sbjct: 144 MGGGVGVSVHGQFRVATEKSVFAMPETAIGLFPDVGGGYFLPRLQ--GKLGYFLALTGFRLK-GRDVYTAGIATHFVDFEKLGMLEEDLLAL---KSPSKENIADVLETYHAKSKTDQDKPFILEEHMDKINSWFSA-NTVEQIVDNLQQDGSS-------FALEQLKVIKKMSPTSLKITLRQLMEGSS---------KTLPEVLIMEYRLSQACMKGHDFHEGVRAVLIDK 353
BLAST of CX298419 vs. ExPASy Swiss-Prot
Match: HIBCH_XENTR (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus tropicalis GN=hibch PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.159e-22 Identity = 84/232 (36.21%), Postives = 120/232 (51.72%), Query Frame = 3 Query: 18 MGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKY--SSDPEGEAPLKLL--LPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAESVRAVLVDK 701 MG G+G+S HG +R+ +E TL AMPE IGLFPDVG Y + P G +G YL +TG R+ SD AG+ T +V S + SL++ L+A+ +++ +L Y S + P L L +I S FS+ SV IIE L+ SS +A + LQ + +P SL +T + + +S L V+ EYR++ DF E VRAVL+DK Sbjct: 143 MGGGVGLSVHGHFRVASENTLFAMPETAIGLFPDVGGGYFLPRLP--GKLGLYLALTGFRLK-GSDVQKAGIATHFVESEKIPSLEQDLVAMKCPS--KENVADVLDSYHNKSYAAQDKPFVLAEHLDKINSLFSA-SSVEAIIENLRCDGSS-------FALKQLQTLSTMSPTSLKITFRQLKEGSS---------MSLQEVLTMEYRLSQACMKGYDFYEGVRAVLIDK 352
BLAST of CX298419 vs. ExPASy Swiss-Prot
Match: HIBCH_DICDI (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Dictyostelium discoideum GN=hibch PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.861e-20 Identity = 73/230 (31.74%), Postives = 123/230 (53.48%), Query Frame = 3 Query: 18 MGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDP-HQDIVALLAKYSSDPEGEA-PLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAESVRAVLVDK 701 MG GIG+S HG++R+ TE T+ AMPE GIG F DVG SY + P + G YL +TG ++ ++ AG+ T +V + ++ +L++ + E+P Q I ++L KY + + L I F + SV++I E+L+ ++S +WA + L+ + +P SL + + + A +L L+ ++ E+R++ + DF E VRA+LVDK Sbjct: 139 MGGGIGLSVHGKFRVATENTVFAMPETGIGFFCDVGGSYFLPRLP--NNYGMYLALTGSKLK-GNNVYLAGVATHFVSNEHIQALEK---EIEECENPTSQTINSILTKYHDKSKSTSNEYNDNLGDIERIF-GKNSVKEIFEQLELLENS------EWAKQTLKTLKSVSPSSLMVVFEQMKQGA--------KLPSLAKCLEMEFRISQHFLEKPDFFEGVRALLVDK 347
BLAST of CX298419 vs. ExPASy Swiss-Prot
Match: HIBCH_SCHPO (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Schizosaccharomyces pombe GN=ehd3 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.884e-15 Identity = 67/232 (28.88%), Postives = 109/232 (46.98%), Query Frame = 3 Query: 18 MGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSE--DPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAESVRAVLVDKIR 707 MG G G++ H +RI E T+ AMPE GIG F DV S+ ++ P G G YLG+T +I D L G+ T +VP L++ L + S+ + I+ SS P P ++ I CF +V II LK++ S+ +++A++A ++ + +P S+ +T + A +S Y++ V+ + DF E V A L+ K + Sbjct: 164 MGGGSGLAMHVPFRIACEDTMFAMPETGIGYFTDVAASFFFSRLP--GYFGTYLGLT-SQIVKGYDCLRTGIATHFVPKHMFPHLEDRLAELNTSDISKINNTILEFAEFASSSPPTFTP--DVMDVINKCFCKNDTV-DIIRALKEYASNT-SALAEFAKSTVKTLYSKSPTSIAVTNRLIKSAAK---------WSISEAFYYDHIVSYYMLKQPDFVEGVNAQLITKTK 379 The following BLAST results are available for this feature:
BLAST of CX298419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298419 ID=CX298419; Name=CX298419; organism=Citrus clementina; type=EST; length=754bpback to top |