CX298421
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX298421 vs. ExPASy Swiss-Prot
Match: ZIP5_ARATH (Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 3.358e-46 Identity = 92/138 (66.67%), Postives = 109/138 (78.99%), Query Frame = 1 Query: 4 GISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVXXXXXXXXSSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAKWA 417 GISLGAS+SP T K L AAL FHQ FEG+GLGGCI Q F + I+++FFS+TTPV SS YD++SPTALIV+G+ NAA+AGILIYMSLVD LAADFM+PKMQ+N RLQ A++SLL+GAG MSLLAKWA Sbjct: 223 GISLGASQSPDTAKALFAALMFHQCFEGLGLGGCIAQGNFNCMSITIMSIFFSVTTPVGIAVGMAISSSYDDSSPTALIVQGVLNAASAGILIYMSLVDFLAADFMHPKMQSNTRLQIMAHISLLVGAGVMSLLAKWA 360
BLAST of CX298421 vs. ExPASy Swiss-Prot
Match: ZIP3_ARATH (Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 4.104e-44 Identity = 89/138 (64.49%), Postives = 107/138 (77.54%), Query Frame = 1 Query: 4 GISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVXXXXXXXXSSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAKWA 417 GISLGAS+SP K L AL FHQ FEG+GLGGCI Q KFK V I++ FF++TTP+ ++ YDE+SPTALIV+G+ NAA+AGILIYMSLVDLLAADF +PKMQ+N LQ A+++LLLGAG MSLLAKWA Sbjct: 202 GISLGASQSPDAAKALFIALMFHQCFEGLGLGGCIAQGKFKCLSVTIMSTFFAITTPIGIVVGMGIANSYDESSPTALIVQGVLNAASAGILIYMSLVDLLAADFTHPKMQSNTGLQIMAHIALLLGAGLMSLLAKWA 339
BLAST of CX298421 vs. ExPASy Swiss-Prot
Match: ZIP1_ARATH (Zinc transporter 1 OS=Arabidopsis thaliana GN=ZIP1 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 3.975e-39 Identity = 85/140 (60.71%), Postives = 105/140 (75.00%), Query Frame = 1 Query: 4 GISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVXXXXXXXXSSV--YDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAKWA 417 GISLGAS+S TIKPL+AAL+FHQFFEG+GLGGCI+ A KS+ ++A FFS+T P+ SS Y + S A++VEG+ NAA+AGILIYMSLVDLLA DFMNP++Q+N L A +SL+LGAG MSLLA WA Sbjct: 216 GISLGASQSIDTIKPLMAALSFHQFFEGLGLGGCISLADMKSKSTVLMATFFSVTAPLGIGIGLGMSSGLGYRKESKEAIMVEGMLNAASAGILIYMSLVDLLATDFMNPRLQSNLWLHLAAYLSLVLGAGSMSLLAIWA 355
BLAST of CX298421 vs. ExPASy Swiss-Prot
Match: ZIP12_ARATH (Probable zinc transporter 12 OS=Arabidopsis thaliana GN=ZIP12 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 5.192e-39 Identity = 78/138 (56.52%), Postives = 103/138 (74.64%), Query Frame = 1 Query: 4 GISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVXXXXXXXXSSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAKWA 417 GISLGAS S TIKPL+AA+TFHQ FEG GLGGCI++AKF+ + + ++ +FF+LT P+ + +Y+ENSP AL V G NA A+GILIYM+LVDL+A FMN K Q++ ++Q +VSL++GAG MSLLA WA Sbjct: 218 GISLGASPSVSTIKPLIAAITFHQLFEGFGLGGCISEAKFRVKKIWVMLMFFALTAPIGIGIGIGVAEIYNENSPMALKVSGFLNATASGILIYMALVDLVAPLFMNQKTQSSMKIQVACSVSLVVGAGLMSLLAIWA 355
BLAST of CX298421 vs. ExPASy Swiss-Prot
Match: ZIP4_ARATH (Zinc transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ZIP4 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 3.365e-38 Identity = 76/138 (55.07%), Postives = 104/138 (75.36%), Query Frame = 1 Query: 4 GISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVXXXXXXXXSSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAKWA 417 G+SLG S+SP TI+PL+AAL+FHQFFEG LGGCI+QA+F+++ I+A FF+LTTP+ +S ++ +SP AL+ EGI ++ +AGIL+YM+LVDL+AADF++ +M N RLQ + V L LGAG MS LA WA Sbjct: 237 GLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFRNKSATIMACFFALTTPLGIGIGTAVASSFNSHSPGALVTEGILDSLSAGILVYMALVDLIAADFLSKRMSCNLRLQVVSYVMLFLGAGLMSALAIWA 374
BLAST of CX298421 vs. ExPASy Swiss-Prot
Match: IRT3_ARATH (Fe(2+) transport protein 3, chloroplastic OS=Arabidopsis thaliana GN=IRT3 PE=2 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 9.792e-38 Identity = 76/138 (55.07%), Postives = 104/138 (75.36%), Query Frame = 1 Query: 4 GISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVXXXXXXXXSSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAKWA 417 G+SLG S+SP TI+PL+AAL+FHQFFEG LGGCI+QA+F+++ I+A FF+LTTP+ +S ++ +S AL+ EGI ++ +AGIL+YM+LVDL+AADF++ KM+ N RLQ + V L LGAG MS LA WA Sbjct: 252 GLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFRNKSATIMACFFALTTPIGIGIGTAVASSFNSHSVGALVTEGILDSLSAGILVYMALVDLIAADFLSTKMRCNFRLQIVSYVMLFLGAGLMSSLAIWA 389
BLAST of CX298421 vs. ExPASy Swiss-Prot
Match: IRT1_ARATH (Fe(2+) transport protein 1 OS=Arabidopsis thaliana GN=IRT1 PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 6.347e-37 Identity = 75/138 (54.35%), Postives = 100/138 (72.46%), Query Frame = 1 Query: 4 GISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVXXXXXXXXSSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAKWA 417 G+SLGA+ TIK L+AAL FHQ FEGMGLGGCI QA++ + ++A FF++TTP S+VY +NSP ALI G+ NA +AG+LIYM+LVDLLAA+FM PK+Q + ++QF ++ LLG G MS++AKWA Sbjct: 202 GLSLGATSDTCTIKGLIAALCFHQMFEGMGLGGCILQAEYTNMKKFVMAFFFAVTTPFGIALGIALSTVYQDNSPKALITVGLLNACSAGLLIYMALVDLLAAEFMGPKLQGSIKMQFKCLIAALLGCGGMSIIAKWA 339
BLAST of CX298421 vs. ExPASy Swiss-Prot
Match: ZIP10_ARATH (Probable zinc transporter 10 OS=Arabidopsis thaliana GN=ZIP10 PE=2 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 2.042e-35 Identity = 76/138 (55.07%), Postives = 99/138 (71.74%), Query Frame = 1 Query: 4 GISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVXXXXXXXXSSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAKWA 417 G+S+G + + TIK LVAAL FHQ FEGMGLGGCI QA++ A++A FF++TTP S Y ENSP +LI G+ NA++AG+LIYM+LVDLLAADFM KMQ + +LQ + ++LLGAG MS++AKWA Sbjct: 227 GLSVGDTNNTCTIKGLVAALCFHQMFEGMGLGGCILQAEYGWVKKAVMAFFFAVTTPFGVVLGMALSKTYKENSPESLITVGLLNASSAGLLIYMALVDLLAADFMGQKMQRSIKLQLKSYAAVLLGAGGMSVMAKWA 364
BLAST of CX298421 vs. ExPASy Swiss-Prot
Match: ZIP8_ARATH (Probable zinc transporter 8 OS=Arabidopsis thaliana GN=ZIP8 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 2.667e-35 Identity = 76/138 (55.07%), Postives = 97/138 (70.29%), Query Frame = 1 Query: 4 GISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVXXXXXXXXSSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAKWA 417 G+SLGA+ TIK L+AAL FHQ FEGMGLGGCI QA++ + ++A FF++TTP SSVY +NSPTALI G+ NA +AG+LIYM+LVDLLAA+FM +Q + +LQ + LLG G MS+LAKWA Sbjct: 210 GLSLGATNDTCTIKGLIAALCFHQMFEGMGLGGCILQAEYTNVKKFVMAFFFAVTTPSGIALGIALSSVYKDNSPTALITVGLLNACSAGLLIYMALVDLLAAEFMGSMLQRSVKLQLNCFGAALLGCGGMSVLAKWA 347
BLAST of CX298421 vs. ExPASy Swiss-Prot
Match: ZIP9_ARATH (Zinc transporter 9 OS=Arabidopsis thaliana GN=ZIP9 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.323e-34 Identity = 71/138 (51.45%), Postives = 97/138 (70.29%), Query Frame = 1 Query: 4 GISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVXXXXXXXXSSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMSLLAKWA 417 GISLG S SP TI+PL+ AL+FHQFFEG LGGC+ +A+ RG A++A FF++TTP+ +S Y+ S AL+ EG+ ++ +AGIL+YM+LVDL+AADF++ KM + R+Q + L LGAG MS LA WA Sbjct: 207 GISLGVSHSPCTIRPLLLALSFHQFFEGFALGGCVAEARLTPRGSAMMAFFFAITTPIGVAVGTAIASSYNSYSVAALVAEGVLDSLSAGILVYMALVDLIAADFLSKKMSVDFRVQVVSYCFLFLGAGMMSALAIWA 344 The following BLAST results are available for this feature:
BLAST of CX298421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298421 ID=CX298421; Name=CX298421; organism=Citrus clementina; type=EST; length=521bpback to top |