CX298435
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX298435 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.672e-36 Identity = 72/122 (59.02%), Postives = 83/122 (68.03%), Query Frame = 1 Query: 1 YCTQ--TPQYPCANGKFYYGLGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 360 YC Q QYPCA GK YYG GP+QL+ N NY AG+AIGFDGL +PE VA D SFK A+W+WM VHS +NQGFG T + ING EC GQN+ Q DR++ Y YC FGV PG NL C Sbjct: 167 YCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMTNVHSVMNQGFGATTKAINGALECNGQNQDQANDRIQFYKKYCADFGVAPGDNLTC 288
BLAST of CX298435 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 8.299e-36 Identity = 70/121 (57.85%), Postives = 83/121 (68.60%), Query Frame = 1 Query: 1 YCTQT-PQYPCANGKFYYGLGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 360 YC + Q+PC GK YYG GP+Q++ N NY AG+ IGFDGL P+ VA+D ISFKTALW+WM VH + QGFG TIR ING EC G+N V RV Y DYC++FGVDPG NL C Sbjct: 168 YCDKNNKQWPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWMNNVHQVMLQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVDPGGNLYC 288
BLAST of CX298435 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 8.299e-36 Identity = 69/121 (57.02%), Postives = 84/121 (69.42%), Query Frame = 1 Query: 1 YCTQT-PQYPCANGKFYYGLGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 360 YC ++ Q+PC GK YYG GP+Q++ N NY AG+ IGFDGL P+ VA+D ISFKTALW+WM VH ++QGFG TIR ING EC G+N V RV Y DYC++FGV PG NL C Sbjct: 165 YCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 285
BLAST of CX298435 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.415e-35 Identity = 69/121 (57.02%), Postives = 82/121 (67.77%), Query Frame = 1 Query: 1 YCTQTP-QYPCANGKFYYGLGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 360 YC T Q+PCA G+ YYG GP+Q++ N NY AGRAIGFDGL P VARD V++FK ALW+WM VH + QGFG T R + ECGG N AQ+ RV Y YC++ GVDPGPNL C Sbjct: 149 YCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNSVHGVVPQGFGATTRAMQRALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 269
BLAST of CX298435 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 4.119e-35 Identity = 70/122 (57.38%), Postives = 84/122 (68.85%), Query Frame = 1 Query: 1 YCTQTP--QYPCANGKFYYGLGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 360 YC + QYPC++ K Y+G GPIQL+ N NY AG A FDGL +PETV+ D V+SFKTALWYWM++V +NQGFG TIR ING EC G N VQ RV YT+YC++ GV G NL C Sbjct: 149 YCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWMQHVRPVINQGFGATIRAINGALECDGANPTTVQARVNYYTEYCRQLGVATGDNLTC 270
BLAST of CX298435 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 1.565e-34 Identity = 69/124 (55.65%), Postives = 84/124 (67.74%), Query Frame = 1 Query: 1 YCTQTPQYPCANGKFYYGLGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMR----YVHSALNQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 360 YC ++ QYPC K Y+G GP+QL+ N NYIDAG+ + FDGLN P+ V RD +ISFKT+LW+W+R YV NQGFG TIR ING EC G N AQ+ RV Y +YC + GV PG NL C Sbjct: 127 YCQESQQYPCNPNKEYFGRGPMQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWIRKGVQYVILDPNQGFGATIRIINGGQECDGHNTAQMMARVGYYQEYCAQLGVSPGNNLPC 250
BLAST of CX298435 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.565e-34 Identity = 69/121 (57.02%), Postives = 82/121 (67.77%), Query Frame = 1 Query: 1 YC-TQTPQYPCANGKFYYGLGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 360 YC Q+PCA G+ YYG GP+Q++ N NY AGR IGF+GL P VA+D VI+FKTALW+WM VH + QGFG TIR ING EC G N AQ+ RV Y YC++ VDPGPNL C Sbjct: 160 YCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWMNNVHGVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLIC 280
BLAST of CX298435 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 4.554e-34 Identity = 68/123 (55.28%), Postives = 84/123 (68.29%), Query Frame = 1 Query: 1 YCTQTP-QYPCANGKFYYGLGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSAL--NQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 360 YC +T Q+PC GK YYG GP+Q++ N NY AG++IGFDGL P+ VAR V++F+TALWYW VH A QGFG TIR ING EC G+N V +RV Y +C++FGVDPG NL C Sbjct: 149 YCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTNNVHDAFVSGQGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGVDPGSNLTC 271
BLAST of CX298435 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 1.371e-30 Identity = 63/121 (52.07%), Postives = 78/121 (64.46%), Query Frame = 1 Query: 1 YCTQTP-QYPCANGKFYYGLGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC 360 YC + QYPCA GK Y+G GPIQL+ N NY G+++ + L PE V+ + ++F+T LW+WM V LNQGFG TIR ING EC G N V R+R Y DYC + GVDPGPNL C Sbjct: 149 YCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRPVLNQGFGATIRAING-MECNGGNSGAVNARIRYYRDYCGQLGVDPGPNLSC 268
BLAST of CX298435 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.420e-27 Identity = 67/152 (44.08%), Postives = 84/152 (55.26%), Query Frame = 1 Query: 1 YCTQTPQYPCANGKFYYGLGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRFGVDPGPNLEC*LDIWYENVTL 393 YC + Q+PCA G+ Y+G GPIQ++ N NY GRAIG D LN+P+ VA D VISFKTALW+WM R+ S+ ++ GFG ING ECG +VQDR+ Y YC GV PG NL+C W+ N L Sbjct: 173 YCPPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVIIGRWNPSSADRAANRLPGFGVITNIINGGLECGRGTDNRVQDRIGFYRRYCSILGVTPGDNLDCVNQRWFGNALL 324 The following BLAST results are available for this feature:
BLAST of CX298435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298435 ID=CX298435; Name=CX298435; organism=Citrus clementina; type=EST; length=558bpback to top |