CX298436
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX298436 vs. ExPASy Swiss-Prot
Match: HS185_ARATH (18.5 kDa class IV heat shock protein OS=Arabidopsis thaliana GN=HSP18.5 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.005e-31 Identity = 82/166 (49.40%), Postives = 100/166 (60.24%), Query Frame = 1 Query: 40 MSIVPVSDQGIISNTPLSSEVWGPFQ--NFLEEFPLSIDLWGPFSDFPSLSRGIFP-----TRQTQINWSETPRAHVFKAYFPGLTGDQVIVFVDEDRMLQISTDDGKFMSRFKLPDNAITDQVKASMNYGLLTVTVSKEMSLQP---------QNVRVVEITGSD 489 MS++P+S++ +S +W PF+ N +FP FPSLSR IFP T TQ+NW+ETP AHVFKAY PG+ D+VI FVDE+ LQI T D KFMSRFKLP+NA+TDQV A M L V V K+ S P +NVRVVEITG D Sbjct: 1 MSMIPISNRRRLSP---GDRIWEPFELMNTFLDFPSPALFLS--HHFPSLSREIFPQTSSSTVNTQLNWTETPTAHVFKAYLPGVDQDEVIAFVDEEGYLQICTGDNKFMSRFKLPNNALTDQVTAWMEDEFLVVFVEKDASSSPPQLPEIEENRNVRVVEITGDD 161
BLAST of CX298436 vs. ExPASy Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.766e-23 Identity = 64/142 (45.07%), Postives = 85/142 (59.86%), Query Frame = 1 Query: 136 PLSIDLWGPFSDFP----SLSRGIFPTRQ-----TQINWSETPRAHVFKAYFPGLTGDQVIVFVDEDRMLQISTD------------------DGKFMSRFKLPDNAITDQVKASMNYGLLTVTVSKEMSLQPQNVRVVEIT 480 P S+D+W PF DFP +LS FP T+I+W ETP AHVFKA PGL ++V V +++DR+LQIS + GKFM RF+LP+NA DQVKA+M G+LTVTV KE +P+ V+ +EI+ Sbjct: 2 PFSLDVWDPFKDFPFTNSALSASSFPQENSAFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEIKKPE-VKSIEIS 142
BLAST of CX298436 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.306e-23 Identity = 64/145 (44.14%), Postives = 89/145 (61.38%), Query Frame = 1 Query: 136 PLSIDLWGPFSDFP---SLSRGIFP--TRQ------TQINWSETPRAHVFKAYFPGLTGDQVIVFVDEDRMLQISTD------------------DGKFMSRFKLPDNAITDQVKASMNYGLLTVTVSKEMSLQPQNVRVVEITG 483 P S+D+W PF DFP +LS FP +R+ T+++W ETP AHVFKA PGL ++V V +++D++LQIS + GKFM RF+LP+NA +QVKASM G+LTVTV KE +P +V+ +EI+G Sbjct: 18 PFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKP-DVKAIEISG 161
BLAST of CX298436 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 6.709e-23 Identity = 61/142 (42.96%), Postives = 84/142 (59.15%), Query Frame = 1 Query: 136 PLSIDLWGPFSDFP---SLSRGIFPTRQ-----TQINWSETPRAHVFKAYFPGLTGDQVIVFVDEDRMLQISTD------------------DGKFMSRFKLPDNAITDQVKASMNYGLLTVTVSKEMSLQPQNVRVVEITG 483 P S+D+W PF DFP S FP T+++W ETP AHVFKA PG+ ++V V +++DR+LQIS + GKFM RF+LP+NA DQVKA+M G+LTVTV KE +P+ V+ ++I+G Sbjct: 18 PFSLDVWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEVKKPE-VKTIDISG 158
BLAST of CX298436 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.349e-22 Identity = 69/168 (41.07%), Postives = 94/168 (55.95%), Query Frame = 1 Query: 40 MSIVPVSDQGIISNT--PLSSEVWGPFQNFLEEFPLSIDLWGPFSDFPSLSRGIFPTRQTQINWSETPRAHVFKAYFPGLTGDQVIVFVDEDRMLQISTD------------------DGKFMSRFKLPDNAITDQVKASMNYGLLTVTVSKEMSLQPQNVRVVEITG 483 MS++P G SN P S +VW P L++FP S P + FP + TR ++W ETP AHVFKA PGL ++V V V++DR+LQIS + GKF+ RF+LP+NA D+VKASM G+LTVTV KE ++ V+ +EI+G Sbjct: 1 MSLIPSFFSGRRSNVFDPFSLDVWDP----LKDFPFSNS--SPSASFPRENPAFVSTR---VDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASMENGVLTVTVPKE-EIKKAEVKSIEISG 158
BLAST of CX298436 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.418e-22 Identity = 60/137 (43.80%), Postives = 82/137 (59.85%), Query Frame = 1 Query: 136 PLSIDLWGPFSDF---PSLSRGIFPTRQTQINWSETPRAHVFKAYFPGLTGDQVIVFVDEDRMLQISTD------------------DGKFMSRFKLPDNAITDQVKASMNYGLLTVTVSKEMSLQPQNVRVVEITG 483 P S+D+W PF DF SLS T+++W ETP AHVF+A PGL ++V V +++DR+LQIS + G FM RF+LP+NA +QVKASM G+LTVTV KE +P +V+ +EI+G Sbjct: 18 PFSLDVWDPFKDFHFPTSLSAENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKP-DVKAIEISG 153
BLAST of CX298436 vs. ExPASy Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.265e-21 Identity = 64/137 (46.72%), Postives = 83/137 (60.58%), Query Frame = 1 Query: 136 PLSIDLWGPFSD--FPSLSRGIFPT-RQTQINWSETPRAHVFKAYFPGLTGDQVIVFVDEDRMLQISTD------------------DGKFMSRFKLPDNAITDQVKASMNYGLLTVTVSKEMSLQPQNVRVVEITG 483 P SID++ PF + FP + G T+I+W ETP AHVFKA PGL ++V V V+EDR+LQIS + GKFM RF+LP+NA DQVKASM G+LTVTV KE +P +V+ +EI+G Sbjct: 19 PFSIDVFDPFRELGFPGTNSGETSAFANTRIDWKETPEAHVFKADLPGLKLEEVKVEVEEDRVLQISGERNMEKEDKNDKWQRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEMKKP-DVKSIEISG 154
BLAST of CX298436 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.158e-21 Identity = 59/138 (42.75%), Postives = 82/138 (59.42%), Query Frame = 1 Query: 136 PLSIDLWGPFSDF----PSLSRGIFPTRQTQINWSETPRAHVFKAYFPGLTGDQVIVFVDEDRMLQISTD------------------DGKFMSRFKLPDNAITDQVKASMNYGLLTVTVSKEMSLQPQNVRVVEITG 483 P S+D+W PF DF S+S T+++W ETP AHVFKA PGL ++V V +++DR+LQIS + GKF RF+LP+NA ++VKASM G+LTVTV KE +P +V+ +EI+G Sbjct: 18 PFSLDMWDPFKDFHVPTSSVSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKASMENGVLTVTVPKEEVKKP-DVKAIEISG 154
BLAST of CX298436 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.158e-21 Identity = 59/137 (43.07%), Postives = 81/137 (59.12%), Query Frame = 1 Query: 136 PLSIDLWGPFSDFP---SLSRGIFPTRQTQINWSETPRAHVFKAYFPGLTGDQVIVFVDEDRMLQISTD------------------DGKFMSRFKLPDNAITDQVKASMNYGLLTVTVSKEMSLQPQNVRVVEITG 483 P S+D+W PF DFP SLS T+++W ETP AHVFKA PGL ++V + + + R+LQIS + GK + RF+LP+NA DQVKASM G+LTVTV KE +P +V+ ++I+G Sbjct: 18 PFSLDVWDPFKDFPFPSSLSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTVPKEEIKKP-DVKAIDISG 153
BLAST of CX298436 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.819e-21 Identity = 63/137 (45.99%), Postives = 82/137 (59.85%), Query Frame = 1 Query: 136 PLSIDLWGPFSD--FPSLSRGIFPT-RQTQINWSETPRAHVFKAYFPGLTGDQVIVFVDEDRMLQISTD------------------DGKFMSRFKLPDNAITDQVKASMNYGLLTVTVSKEMSLQPQNVRVVEITG 483 P SID++ PF + FPS + G T+I+W ETP HVFK PGL ++V V V+EDR+LQIS + GKFM RF+LP+NA DQVKASM G+LTVTV KE +P+ V+ +EI+G Sbjct: 19 PFSIDVFDPFRELGFPSTNSGESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVKKPE-VKSIEISG 154 The following BLAST results are available for this feature:
BLAST of CX298436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298436 ID=CX298436; Name=CX298436; organism=Citrus clementina; type=EST; length=582bpback to top |