CX298449
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX298449 vs. ExPASy Swiss-Prot
Match: ISPH_SYNP6 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ispH PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 8.555e-32 Identity = 62/101 (61.39%), Postives = 86/101 (85.15%), Query Frame = 1 Query: 1 AMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKR 303 AM+++VEE +DLI+V+GG+NSSNT+HLQEIA +R IPS+ ID+ +RIGPGN+I +K +H +L E WLP G +TIGITSGASTPDK VEDV++++F+++R Sbjct: 297 AMFQLVEEPLDLIVVIGGFNSSNTTHLQEIAIERQIPSFHIDAAERIGPGNRIEHKPLHTDLTTTEPWLPAGPLTIGITSGASTPDKVVEDVIERLFDLQR 397
BLAST of CX298449 vs. ExPASy Swiss-Prot
Match: ISPH_SYNE7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus elongatus (strain PCC 7942) GN=ispH PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 8.555e-32 Identity = 62/101 (61.39%), Postives = 86/101 (85.15%), Query Frame = 1 Query: 1 AMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKR 303 AM+++VEE +DLI+V+GG+NSSNT+HLQEIA +R IPS+ ID+ +RIGPGN+I +K +H +L E WLP G +TIGITSGASTPDK VEDV++++F+++R Sbjct: 297 AMFQLVEEPLDLIVVIGGFNSSNTTHLQEIAIERQIPSFHIDAAERIGPGNRIEHKPLHTDLTTTEPWLPAGPLTIGITSGASTPDKVVEDVIERLFDLQR 397
BLAST of CX298449 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP4 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ispH PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.459e-31 Identity = 63/100 (63.00%), Postives = 82/100 (82.00%), Query Frame = 1 Query: 1 AMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 300 AM+K+VE +DL++V+GG+NSSNT+HLQEI+ +R IPSY IDS RIGPGN++ +K +H L KENWLP+G I +GITSGASTPDK V DVL+K+F +K Sbjct: 298 AMFKLVEYPLDLMVVIGGFNSSNTTHLQEISIEREIPSYHIDSADRIGPGNRVEHKPLHRPLEIKENWLPEGPIVVGITSGASTPDKVVSDVLEKIFALK 397
BLAST of CX298449 vs. ExPASy Swiss-Prot
Match: ISPH_ACAM1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Acaryochloris marina (strain MBIC 11017) GN=ispH PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 3.594e-30 Identity = 57/104 (54.81%), Postives = 83/104 (79.81%), Query Frame = 1 Query: 1 AMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEA 312 A++++V+E +DL++V+GG+NSSNT+HLQEI+ D+ IPSY IDS RIGPGN++ +K ++ +L +NWLP G + IG+TSGASTPDK V D+++K+F IK A Sbjct: 306 AIFQLVDEPLDLMVVIGGFNSSNTTHLQEISIDKNIPSYHIDSVDRIGPGNRVEHKPLNADLTVTDNWLPNGPLAIGVTSGASTPDKVVSDIVEKIFSIKSASA 409
BLAST of CX298449 vs. ExPASy Swiss-Prot
Match: ISPH_CYAA5 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain ATCC 51142) GN=ispH PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 4.694e-30 Identity = 61/105 (58.10%), Postives = 84/105 (80.00%), Query Frame = 1 Query: 1 AMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEAL 315 AM +VEE+VD+++V+GG+NSSNT+HLQEI+ ++GI SY IDS+KRI PGNKI +K + ++ KENWLP G+I +G+TSGASTPDK VE V++++FE K L Sbjct: 297 AMLNLVEEEVDVMVVIGGFNSSNTTHLQEISIEKGIDSYHIDSDKRILPGNKIEHKPLEKDIETKENWLPDGKIIVGVTSGASTPDKVVEAVIERIFEEKNAGVL 401
BLAST of CX298449 vs. ExPASy Swiss-Prot
Match: ISPH_THEEB (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Thermosynechococcus elongatus (strain BP-1) GN=ispH PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 6.131e-30 Identity = 62/100 (62.00%), Postives = 78/100 (78.00%), Query Frame = 1 Query: 1 AMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 300 AM +V+E +DL++V+GG+NSSNT+HLQEIA + GIPSY IDS RIGPGN+I +K +H ENWLP ITIGITSGASTPDK VE+VL K+F ++ Sbjct: 297 AMLSLVKEPLDLMVVIGGYNSSNTTHLQEIAIEHGIPSYHIDSADRIGPGNRIEHKPLHQNPTVAENWLPDRPITIGITSGASTPDKVVEEVLNKIFALR 396
BLAST of CX298449 vs. ExPASy Swiss-Prot
Match: ISPH_ANAVT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ispH PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 5.190e-29 Identity = 57/105 (54.29%), Postives = 84/105 (80.00%), Query Frame = 1 Query: 1 AMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEAL 315 AM ++V+E +DL++V+GG+NSSNT+ LQ+I+++RG+PSY ID +RI N I ++ ++GELV ENWLP G+I +G+TSGASTPDK VEDV++K+F +K A+ Sbjct: 297 AMLELVQENLDLMIVIGGFNSSNTTQLQQISQERGLPSYHIDVVERIKSVNSIEHRQLNGELVTTENWLPAGKIVVGVTSGASTPDKVVEDVIEKIFALKATTAV 401
BLAST of CX298449 vs. ExPASy Swiss-Prot
Match: ISPH_ANASP (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena sp. (strain PCC 7120) GN=ispH PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 6.778e-29 Identity = 57/105 (54.29%), Postives = 84/105 (80.00%), Query Frame = 1 Query: 1 AMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEAL 315 AM ++V+E +DL++V+GG+NSSNT+ LQ+I+++RG+PSY ID +RI N I ++ ++GELV ENWLP G+I +G+TSGASTPDK VEDV++K+F +K A+ Sbjct: 297 AMLELVQENLDLMIVIGGFNSSNTTQLQQISQERGLPSYHIDVVERIKSINSIEHRQLNGELVTTENWLPAGKIVVGVTSGASTPDKVVEDVIEKIFALKATAAV 401
BLAST of CX298449 vs. ExPASy Swiss-Prot
Match: ISPH_SYNY3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=ispH PE=3 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 8.853e-29 Identity = 59/103 (57.28%), Postives = 80/103 (77.67%), Query Frame = 1 Query: 1 AMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 309 AM+ +VEE + L++V+GG+NSSNT+HLQEIA + GIPS IDS RIGPGN++ +K + +L E WLP G+IT+G+TSGASTPDK VE+V+KK+ IK + Sbjct: 270 AMFDLVEEDLSLMVVIGGFNSSNTTHLQEIAVEHGIPSVHIDSGDRIGPGNRVEHKPLGKDLEVLEPWLPAGKITVGVTSGASTPDKVVEEVMKKILAIKEAQ 372
BLAST of CX298449 vs. ExPASy Swiss-Prot
Match: ISPH_NOSP7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ispH PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 3.364e-28 Identity = 57/105 (54.29%), Postives = 83/105 (79.05%), Query Frame = 1 Query: 1 AMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEAL 315 AM ++VE ++L++V+GG+NSSNT+ LQ+IA +R IPSY ID+ +RI G+ I ++ ++G+L+ ENWLP G+I +GITSGASTPDK VEDV++K+F +K AL Sbjct: 297 AMLELVEHNLNLMVVIGGFNSSNTTQLQQIAFERRIPSYHIDTVERIKSGDSIEHRQLNGQLITTENWLPDGEIVVGITSGASTPDKVVEDVIEKIFAVKATAAL 401 The following BLAST results are available for this feature:
BLAST of CX298449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298449 ID=CX298449; Name=CX298449; organism=Citrus clementina; type=EST; length=480bpback to top |