CX298460

Overview
NameCX298460
Unique NameCX298460
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length423
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14162 contig Ccv1_Contig14162:1300..1722. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX298460 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.150e-18
Identity = 41/91 (45.05%), Postives = 57/91 (62.64%), Query Frame = 2
Query:    2 PERFLTTHADVDVNTQHFEYVPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGTPVDMQIGLGLALPKSNPLEVIIKPRLAEDLFR 274
            P+RFLTTH D+DV   HF+ +PF  GRR CPG++ GLQ V L LA  L  F++      P+DM    G+   K+ PLEV++KP L+   ++
Sbjct:  433 PDRFLTTHKDIDVKGHHFQLLPFGSGRRVCPGISFGLQTVHLALASFLHSFEILNPSTEPLDMTEAFGVTNTKATPLEVLVKPCLSPSCYK 523          
BLAST of CX298460 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.150e-18
Identity = 42/93 (45.16%), Postives = 57/93 (61.29%), Query Frame = 2
Query:    2 PERFLTTHADVDVNTQHFEYVPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGTPVDMQIGLGLALPKSNPLEVIIKPRLAEDLFRCI 280
            PERFLTTH DVD+   +FE +PF  GRR C GM+ GL +V  TLA +L  FD+      PVDM    G    K+ PLE+++KPR + + +  +
Sbjct:  435 PERFLTTHKDVDLRGHNFELLPFGSGRRVCAGMSLGLNMVHFTLANLLHSFDILNPSAEPVDMTEFFGFTNTKATPLEILVKPRQSPNYYETL 527          
BLAST of CX298460 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.257e-18
Identity = 43/93 (46.24%), Postives = 57/93 (61.29%), Query Frame = 2
Query:    2 PERFLTTHADVDVNTQHFEYVPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGTPVDMQIGLGLALPKSNPLEVIIKPRLAEDLFRCI 280
            PERFLTT  D+D+  QHF+ +PF  GRR CPG+  GLQ V+LTLA  L  F++      P+DM         K+ PLE++IKPRL+   +  I
Sbjct:  430 PERFLTTDKDIDMKGQHFQLLPFGGGRRICPGINLGLQTVRLTLASFLHSFEILNPSTEPLDMTEVFRATNTKATPLEILIKPRLSPSCYESI 522          
BLAST of CX298460 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 2.225e-15
Identity = 41/92 (44.57%), Postives = 55/92 (59.78%), Query Frame = 2
Query:    2 PERFLTTHADVDVNTQHFEYVPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGTPVDMQIGLGLALPKSNPLEVIIKPRLAEDLFRC 277
            PERFL+TH DVDV  Q+FE +PF  GRR C GM+ GL +V   LA  L  F++       +D+   L     K+ PLEV++KP L+   F+C
Sbjct:  452 PERFLSTHKDVDVRGQNFELLPFGSGRRMCAGMSLGLHMVHYILANFLHSFEILNPSPESIDVTEVLEFVTTKATPLEVLVKPCLS---FKC 540          
BLAST of CX298460 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.008e-12
Identity = 36/87 (41.38%), Postives = 54/87 (62.07%), Query Frame = 2
Query:    2 PERFLTTHAD-VDVNTQHFEYVPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGGT-PVDMQIGLGLALPKSNPLEVIIKPRL 256
            PERF+    + +DV  QH+ ++PF  GRR+CPG +   Q+V + LA I+Q F    VGG   VDM+   G+ LP++NP+  +  PR+
Sbjct:  417 PERFIRDGQNQLDVRGQHYHFIPFGSGRRTCPGASLAWQVVPVNLAIIIQCFQWKLVGGNGKVDMEEKSGITLPRANPIICVPVPRI 503          
BLAST of CX298460 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.130e-12
Identity = 41/95 (43.16%), Postives = 57/95 (60.00%), Query Frame = 2
Query:    2 PERFLT--THADVDVNTQHFEYVPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLATVGG-TP--VDMQIGLGLALPKSNPLEVIIKPRLAEDLF 271
            PERFL     + VDV    FE +PF  GRR C G++ GL+ +Q   A ++QGFD    GG TP  ++M+   GL L ++ PL V  KPRLA +++
Sbjct:  414 PERFLPGGEKSGVDVKGSDFELIPFGAGRRICAGLSLGLRTIQFLTATLVQGFDWELAGGVTPEKLNMEESYGLTLQRAVPLVVHPKPRLAPNVY 508          
BLAST of CX298460 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.493e-11
Identity = 36/87 (41.38%), Postives = 52/87 (59.77%), Query Frame = 2
Query:    2 PERFLTT-HADVDVNTQHFEYVPFSFGRRSCPGMTSGLQIVQLTLARILQGFDLA-TVGGTPVDMQIGLGLALPKSNPLEVIIKPRL 256
            PERF     + +DV  QH+ ++PF  GRRSCPG +  LQIV + LA ++Q F      G   VDM+   G+ LP+++P+  +  PRL
Sbjct:  410 PERFFENGQSQLDVRGQHYHFIPFGSGRRSCPGTSLALQIVHVNLAIMIQCFQWKFDNGNNKVDMEEKSGITLPRAHPIICVPVPRL 496          
The following BLAST results are available for this feature:
BLAST of CX298460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
C82A4_SOYBN2.150e-1845.05Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C82A3_SOYBN2.150e-1845.16Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]
C82A2_SOYBN6.257e-1846.24Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C82A1_PEA2.225e-1544.57Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C93A1_SOYBN3.008e-1241.38Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
F3PH_ARATH5.130e-1243.16Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C93A2_SOYBN1.493e-1141.38Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
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Properties
Property NameValue
Genbank descriptionC06012D10SK RindPdig24 Citrus clementina cDNA clone C06012D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298460 ID=CX298460; Name=CX298460; organism=Citrus clementina; type=EST; length=423bp
ACCAGAAAGGTTTCTGACAACTCATGCTGATGTTGATGTCAACACTCAAC
ATTTTGAGTATGTTCCGTTCAGCTTCGGAAGAAGATCGTGCCCTGGAATG
ACATCTGGCTTACAAATTGTTCAATTAACGCTTGCTCGGATTCTTCAGGG
GTTTGATTTGGCAACCGTGGGGGGCACACCTGTTGATATGCAGATTGGTT
TGGGCCTTGCCTTGCCCAAATCGAACCCTCTTGAAGTTATCATAAAACCT
CGCCTCGCTGAGGATCTTTTTCGATGCATTTGAAGATTTTATCATTTTAA
ACGATCATTTACGTGTATTATCAGAAAGAACTAATGTGAAGGCGACTAAT
GCGCAATAACATTTTTTCTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAACCTCGGGGGGGGGCCCGGT
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