CX298494

Overview
NameCX298494
Unique NameCX298494
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX298494 vs. ExPASy Swiss-Prot
Match: YJBI_BACSU (Hemoglobin-like protein yjbI OS=Bacillus subtilis GN=yjbI PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11
Identity = 35/93 (37.63%), Postives = 51/93 (54.84%), Query Frame = 1 
Query:  157 FRKLGLQTFINLSTNFYTRVYDDEEEWFRSIFANSNKEEAIQNQYEFFVQRMGGPPLYSQRKGHPALIGRHRPFPVTHQAAERWLHHMQIALD 435
            +  +G +    L   FY RV        + IF  S+  E  + Q +F  Q +GGPPLY++  GHP L  RH PFP+T++ A+ WL  M+ A+D
Sbjct:    9 YEAIGEELLSQLVDTFYERVAS--HPLLKPIFP-SDLTETARKQKQFLTQYLGGPPLYTEEHGHPMLRARHLPFPITNERADAWLSCMKDAMD 98
The following BLAST results are available for this feature:
BLAST of CX298494 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YJBI_BACSU8.621e-1137.63Hemoglobin-like protein yjbI OS=Bacillus subtilis ... [more]
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Properties
Property NameValue
Genbank descriptionC06012G09SK RindPdig24 Citrus clementina cDNA clone C06012G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298494 ID=CX298494; Name=CX298494; organism=Citrus clementina; type=EST; length=713bp
GATTCGGCCGAGGGCTAGCTCAGCCTACAGTGTTGAGCGAGGGAGCGAGA
GAGAGGGAGAGGATATTAGAGAGGAATGCAAACACTGCAAGAGAAAGCCT
CCGAGTGGAGCGGAGTTGACCCAGCGGACGCGTTCGCCATTGACGAAACC
AACTTGTTTCGGAAGCTTGGCCTTCAAACTTTCATCAATCTCTCCACCAA
CTTCTATACCAGGGTTTATGACGACGAGGAAGAGTGGTTTAGGTCAATTT
TTGCAAATTCGAATAAAGAAGAAGCAATTCAGAACCAATATGAGTTTTTT
GTGCAGAGAATGGGAGGGCCTCCTCTGTATTCTCAGAGGAAAGGCCATCC
TGCATTAATTGGACGTCATCGACCATTCCCAGTAACACATCAAGCTGCAG
AGAGATGGTTACATCATATGCAGATTGCACTAGACAGTACCCCAGAAATT
GATGCTGACTCAAAAATGAAAATGATGAATTTTTTCAGACACACTGCATT
CTTTCTTGTGGCTGGAGATGAGTTGAAAAATCACAATCATCAACCTAGAT
GCAAGGATGAGACTAGCAAACCAGCTGCAGAGTAACAACAATATTAACAG
AGGGGTATCATCATTCATTGAACCCTCTAAATAATGCACTGGTGTAAAAC
CAAACTTTCTCATAGCTTTCATTAATAAATCTGAAATCTATGGTTTTCAC
TTATTTATATTTT
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