CX298645
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX298645 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 344.739 bits (883), Expect = 2.764e-94 Identity = 155/178 (87.08%), Postives = 166/178 (93.26%), Query Frame = 2 Query: 2 CGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFRV 535 CGACFELKC DPQWC+ G+P+ILITATNFCPPN AQPSDNGGWCNPPR HFDLAMP+FLK+AQYRAGIVPVSYRRVPCRKRGGIRFTING RYFNLVL+TNVAGAGDIVR SVKG+ T W+S+SRNWGQNWQSNA LVGQALSFRVTGSDRRTSTSWN+ P+NWQFGQTF GKNFRV Sbjct: 80 CGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTFVGKNFRV 257
BLAST of CX298645 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 342.813 bits (878), Expect = 1.050e-93 Identity = 151/178 (84.83%), Postives = 168/178 (94.38%), Query Frame = 2 Query: 2 CGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFRV 535 CGACFELKC DP+WC+ G+P+I ITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLK+A+YRAGIVPVS+RRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAG+IVR+ VKG +T W++MSRNWGQNWQSN+ LVGQ+LSFRVT SDRR+STSWN+APANW+FGQTF GKNFRV Sbjct: 80 CGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKFGQTFMGKNFRV 257
BLAST of CX298645 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 335.88 bits (860), Expect = 1.284e-91 Identity = 151/178 (84.83%), Postives = 163/178 (91.57%), Query Frame = 2 Query: 2 CGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFRV 535 CGACFE+KC DP+WC PGNP+IL+TATNFCPPNFAQPSD+GGWCNPPR HFDLAMPMFLK+ YRAGIVPVSYRRVPCRK GGIRFT+NGFRYFNLVLVTNVAGAGDI VSVKG+ T W+ MSRNWGQNWQSNA L+GQ+LSFRVT SDRR+STSWNVAPA WQFGQTFSGKNFRV Sbjct: 85 CGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQTFSGKNFRV 262
BLAST of CX298645 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 335.109 bits (858), Expect = 2.190e-91 Identity = 150/180 (83.33%), Postives = 164/180 (91.11%), Query Frame = 2 Query: 2 CGACFELKCGGDP--QWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFRV 535 CGACFE+KC P +WC+PG+P+ILITATNFCPPN+A PSDNGGWCNPPRPHFDLAMPMFL +A+YRAGIVPVSYRRVPCRK+GG+RFTINGFRYFNLVL+TNVAGAGDIVR SVKG +T W+ MSRNWGQNWQSN+ LVGQALSFRVTGSDRRTSTSWN APA W FGQTF GKNFRV Sbjct: 85 CGACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGWHFGQTFEGKNFRV 264
BLAST of CX298645 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 333.183 bits (853), Expect = 8.322e-91 Identity = 145/178 (81.46%), Postives = 163/178 (91.57%), Query Frame = 2 Query: 2 CGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFRV 535 CGACFE+KC DP+WC+PGNP++ +TATNFCPPN AQPSDNGGWCNPPR HFDLAMP+FLK+A+YRAGIVP+SYRRV CRK GGIRFTING RYFNLVL+TNVAGAGDI R SVKG+ T W+S++RNWGQNWQSNA LVGQ+LSFRVT SDRRTSTSWN+AP+NWQFGQTF GKNFRV Sbjct: 83 CGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTFVGKNFRV 260
BLAST of CX298645 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1) HSP 1 Score: 327.791 bits (839), Expect = 3.496e-89 Identity = 146/178 (82.02%), Postives = 164/178 (92.13%), Query Frame = 2 Query: 2 CGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFRV 535 CG+CFELKC DP WC PGNP+ILITATNFCPPNF Q SDNGGWCNPPR HFDLAMPMFL +A+Y+AGIVPVSYRR+PCRK+GGIRFTINGF+YFNLVLVTNVAGAGD+++VSVKG+NTQWL +SRNWGQNWQSNA LVGQ+LSFRV SD R+STS N+AP+NWQFGQT+SGKNFRV Sbjct: 81 CGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNWQFGQTYSGKNFRV 258
BLAST of CX298645 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1) HSP 1 Score: 277.715 bits (709), Expect = 4.149e-74 Identity = 123/177 (69.49%), Postives = 146/177 (82.49%), Query Frame = 2 Query: 2 CGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFR 532 CGACF++KC DP+WC G I +T TNFCPPNFAQ ++ GGWCNPP+ HFDLA P+FL++AQY+AG+VPV YRRV CR++GGIRFTING YFNLVL+TNVAGAGD++ VS+KG NT+W SMSRNWGQNWQSNA+L GQALSF+VT SD RT S N P NW FGQT++GK FR Sbjct: 78 CGACFQIKCVDDPKWCIGGT--ITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNWSFGQTYTGKQFR 252
BLAST of CX298645 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2) HSP 1 Score: 271.552 bits (693), Expect = 2.973e-72 Identity = 123/177 (69.49%), Postives = 144/177 (81.36%), Query Frame = 2 Query: 2 CGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFR 532 CGACFE+KC D WC PG AI++TATNFCPPN A P++ GGWCNPP HFDL+ P+F ++AQY+AG+VPVSYRRVPC +RGGIRFTING YFNLVLVTNV GAGD+ V+VKG+ T+W MSRNWGQNWQSN L GQALSF+VT SD RT S N+APA+W FGQTF+G+ FR Sbjct: 79 CGACFEIKCQSDGAWCLPG--AIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASWSFGQTFTGRQFR 253
BLAST of CX298645 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2) HSP 1 Score: 270.396 bits (690), Expect = 6.624e-72 Identity = 122/176 (69.32%), Postives = 142/176 (80.68%), Query Frame = 2 Query: 2 CGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNF 529 CG+C+EL+C D QWC PG+ + +TATN CPPN+A P+D+GGWCNPPRPHFD+A P FL++ YRAGIVPVSYRRVPC K+GGIRFTING YFNLVLVTNVAG GD+ VS+KG++T W MSRNWGQNWQSN+ L GQ+LSF+V SD RT TS NV PA WQFGQTF G F Sbjct: 78 CGSCYELRCDNDGQWCLPGS--VTVTATNLCPPNYALPNDDGGWCNPPRPHFDMAEPAFLQIGVYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSYLDGQSLSFQVAVSDGRTVTSNNVVPAGWQFGQTFEGGQF 251
BLAST of CX298645 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 1.476e-71 Identity = 120/177 (67.80%), Postives = 144/177 (81.36%), Query Frame = 2 Query: 2 CGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFR 532 CG+CFE++C D +WC PG+ I++TATNFCPPN A ++NGGWCNPP HFDLA P+F ++AQYRAGIVPVSYRRVPCR+RGGIRFTING YFNLVL+TNV GAGD+ ++KG+ T W +MSRNWGQNWQSN+ L GQALSF+VT SD RT S+N APA W +GQTF+G FR Sbjct: 75 CGSCFEIRCENDGKWCLPGS--IVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTFAGGQFR 249 The following BLAST results are available for this feature:
BLAST of CX298645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >CX298645 ID=CX298645; Name=CX298645; organism=Citrus clementina; type=EST; length=703bpback to top |