CX298659

Overview
NameCX298659
Unique NameCX298659
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig758 contig Ccv1_Contig758:1..721. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX298659 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.344e-59
Identity = 113/165 (68.48%), Postives = 131/165 (79.39%), Query Frame = 1
Query:    4 VFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRKRXXXXXXXXXXXXXPAMPRVQCAQQ 498
            VF+LQ KEHPKFKRK DDL+V+HTLSL E+LCGFQF LTHLDGRQLLIKS PGE++KP Q+KAINDEGMP +QRPFMKG+LYI F+VEFP+   L+P+QC+ LE VLPPR    LSDMELD+CEE T+HDVNI+EEMRRK+              A  RVQCAQQ
Sbjct:  252 VFVLQQKEHPKFKRKGDDLFVEHTLSLVESLCGFQFILTHLDGRQLLIKSLPGEVVKPDQFKAINDEGMPMYQRPFMKGKLYIHFSVEFPDS--LNPEQCKALEGVLPPRTSVQLSDMELDECEETTLHDVNIEEEMRRKQAQEAYDEDEDMHGGAQ-RVQCAQQ 413          
BLAST of CX298659 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.645e-58
Identity = 110/167 (65.87%), Postives = 129/167 (77.25%), Query Frame = 1
Query:    4 VFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRK--RXXXXXXXXXXXXXPAMPRVQCAQQ 498
            VF+LQ KEHPKFKRK DDL+ +H+LSLTEALCGFQF LTHLD RQLLIKSNPGE+IKP Q+K INDEGMP +QRPFM+G+LYI F+V+FP+   L+PDQC+ LESVLP R    L+DME+D+CEE TMHDVNI+EEMRRK  +                 RVQCAQQ
Sbjct:  254 VFVLQQKEHPKFKRKGDDLFYEHSLSLTEALCGFQFVLTHLDNRQLLIKSNPGEVIKPDQFKGINDEGMPMYQRPFMRGKLYIHFSVDFPDS--LTPDQCKALESVLPSRNASRLTDMEIDECEETTMHDVNIEEEMRRKQHQQAQEAYDEDDEGHGGAQRVQCAQQ 418          
BLAST of CX298659 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.258e-57
Identity = 110/167 (65.87%), Postives = 129/167 (77.25%), Query Frame = 1
Query:    4 VFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRK--RXXXXXXXXXXXXXPAMPRVQCAQQ 498
            VF+LQ KEHPKF+RK DDL+  HTLSLTEALCGFQF LTHLDGRQLLIKSNPGE++KP Q+KAINDEGMP +QRPFM+G+LYIQF V+FP+   L+PDQC+ +ESVLP      L+DME+D+CEE TMHDVNI+EEMRRK  +                 RVQCAQQ
Sbjct:  233 VFVLQQKEHPKFQRKGDDLFYKHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIQFLVDFPDS--LTPDQCKVIESVLPRSASSQLTDMEIDECEETTMHDVNIEEEMRRKQHQHAQEAYDEDDEGHGGGQRVQCAQQ 397          
BLAST of CX298659 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 1.816e-56
Identity = 110/169 (65.09%), Postives = 127/169 (75.15%), Query Frame = 1
Query:    4 VFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRK----RXXXXXXXXXXXXXPAMPRVQCAQQ 498
            VF+LQ KEHPKFKRK +DL+V+HTLSLTEALCGFQF LTHLDGR LLIKSNPGE++KP  YKAI+DEGMP +QRPFMKG+LYI F VEFP+   LSPDQ + LE+VLP      LSDME+D+CEE T+HDVNI++EMRRK    R                 RVQCAQQ
Sbjct:  254 VFVLQQKEHPKFKRKGEDLFVEHTLSLTEALCGFQFVLTHLDGRSLLIKSNPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPDS--LSPDQTKALEAVLPKPSTAQLSDMEIDECEETTLHDVNIEDEMRRKAQAQREAYDDDDEDDDHPGGAQRVQCAQQ 420          
BLAST of CX298659 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.372e-56
Identity = 106/166 (63.86%), Postives = 132/166 (79.52%), Query Frame = 1
Query:    4 VFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRKRXXXXXXXXXXXXXPA-MPRVQCAQQ 498
            VF+LQ KEHPKFKRK +DL+ +HTLSLTEALCGF+F LTHLDGRQLLIKSN GE++KP Q+KAI DEGMP +QRPFMKG++YI F VEFP+   L+PDQ ++LE++LPP+P  +L+ MELD+CEE T+H+VNI+EEM+RK+             PA   RVQCAQQ
Sbjct:  254 VFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFRFVLTHLDGRQLLIKSNLGEVVKPDQFKAIEDEGMPIYQRPFMKGKMYIHFTVEFPDS--LNPDQVKSLEAILPPKPSMSLTYMELDECEETTLHNVNIEEEMKRKQTQAQQEAYDEDDEPAGGQRVQCAQQ 417          
BLAST of CX298659 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 2.899e-54
Identity = 105/167 (62.87%), Postives = 125/167 (74.85%), Query Frame = 1
Query:    4 VFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRK--RXXXXXXXXXXXXXPAMPRVQCAQQ 498
            VF++Q KEHPKFKRK +DL+V+HT+SLTEALCGFQF LTHLD RQLLIKS PGE++KP  YKAI+DEGMP +QRPFMKG+LYI F VEFPE   LSPDQ + +E+VLP      +SDME+DDCEE T+HDVNI++EM+RK                    RVQCAQQ
Sbjct:  255 VFVIQQKEHPKFKRKGEDLFVEHTISLTEALCGFQFVLTHLDKRQLLIKSKPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPES--LSPDQTKAIEAVLPKPTKAAISDMEIDDCEETTLHDVNIEDEMKRKAQAQREAYDDDEEDHPGGAQRVQCAQQ 419          
BLAST of CX298659 vs. ExPASy Swiss-Prot
Match: DNJA2_BOVIN (DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.038e-27
Identity = 60/131 (45.80%), Postives = 88/131 (67.18%), Query Frame = 1
Query:    4 VFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPG-KNLSDMELDDCEEVTMHD 393
            V +LQ KEH  F+R  +DL++ + + L EALCGFQF   HLDGRQ+++K  PG++I+PG  + +  EGMP ++ PF KG LYI+F+V+FPE   ++PD+   LE +LP RP   N+    + D EEV + +
Sbjct:  249 VLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNI----IGDTEEVELQE 375          
BLAST of CX298659 vs. ExPASy Swiss-Prot
Match: DNJA2_HUMAN (DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.356e-27
Identity = 55/111 (49.55%), Postives = 79/111 (71.17%), Query Frame = 1
Query:    4 VFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRP 336
            V +LQ KEH  F+R  +DL++ + + L EALCGFQF   HLDGRQ+++K  PG++I+PG  + +  EGMP ++ PF KG LYI+F+V+FPE   ++PD+   LE +LP RP
Sbjct:  249 VLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRP 359          
BLAST of CX298659 vs. ExPASy Swiss-Prot
Match: DNJA2_MOUSE (DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.731e-27
Identity = 54/111 (48.65%), Postives = 78/111 (70.27%), Query Frame = 1
Query:    4 VFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRP 336
            V +LQ KEH  F+R  +DL++ + + L EALCGFQF   HLD RQ+++K  PG++I+PG  + +  EGMP ++ PF KG LYI+F+V+FPE   ++PD+   LE +LP RP
Sbjct:  249 VLLLQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRP 359          
BLAST of CX298659 vs. ExPASy Swiss-Prot
Match: DNJA2_RAT (DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.558e-26
Identity = 53/111 (47.75%), Postives = 77/111 (69.37%), Query Frame = 1
Query:    4 VFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRP 336
            V  +Q KEH  F+R  +DL++ + + L EALCGFQF   HLD RQ+++K  PG++I+PG  + +  EGMP ++ PF KG LYI+F+V+FPE   ++PD+   LE +LP RP
Sbjct:  249 VLFVQEKEHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRP 359          
The following BLAST results are available for this feature:
BLAST of CX298659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
DNJH_CUCSA1.344e-5968.48DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNJH2_ALLPO5.645e-5865.87DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNJH1_ALLPO1.258e-5765.87DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNAJ3_ARATH1.816e-5665.09Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNJH_ATRNU2.372e-5663.86DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNAJ2_ARATH2.899e-5462.87Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
DNJA2_BOVIN1.038e-2745.80DnaJ homolog subfamily A member 2 OS=Bos taurus GN... [more]
DNJA2_HUMAN1.356e-2749.55DnaJ homolog subfamily A member 2 OS=Homo sapiens ... [more]
DNJA2_MOUSE6.731e-2748.65DnaJ homolog subfamily A member 2 OS=Mus musculus ... [more]
DNJA2_RAT2.558e-2647.75DnaJ homolog subfamily A member 2 OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank descriptionC06014B07SK RindPdig24 Citrus clementina cDNA clone C06014B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298659 ID=CX298659; Name=CX298659; organism=Citrus clementina; type=EST; length=721bp
AGGGTCTTCATATTGCAATTGAAGGAGCATCCCAAGTTTAAGCGGAAGTT
CGATGATCTTTATGTTGATCACACCCTCAGTTTGACTGAGGCTCTGTGTG
GGTTTCAGTTTGCCTTAACCCATCTTGATGGGAGGCAGCTACTGATCAAA
TCAAATCCTGGGGAGATCATTAAGCCTGGTCAATACAAAGCAATCAACGA
TGAGGGAATGCCGCATCACCAAAGGCCCTTTATGAAAGGCAGGCTTTACA
TTCAATTCAATGTAGAATTTCCGGAATGTGGAATCCTTTCTCCTGATCAG
TGCCGGACTTTAGAGAGTGTACTACCTCCGAGGCCAGGCAAGAACCTGTC
TGACATGGAGCTGGATGATTGTGAGGAGGTCACCATGCATGATGTTAACA
TTGATGAAGAGATGAGGCGTAAACGGTATCAACAGCAGCAAGAGGCATAT
GATGAAGATGATGAACCAGCAATGCCAAGAGTCCAGTGTGCTCAGCAATG
AGGCAAATTCAATTTTGCCTTTCCTGGTCCCCTTGCCTATCAGAGGCAAT
GAGCATTTTCAATTTGGCATCTAGTATGTTTTTTTTACCGCTGCATGATT
TTTGTGCTAATTAATATTATAAGCAAGCAGTAGCAGTTATTTACCAGGTA
GAAGGTGGATAGTATTTATATACACACACATATGCATATGTATATGCAGC
AGCGGATCAGATGCTTATGTC
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