CX298871
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX298871 vs. ExPASy Swiss-Prot
Match: YSL3_ARATH (Metal-nicotianamine transporter YSL3 OS=Arabidopsis thaliana GN=YSL3 PE=2 SV=1) HSP 1 Score: 424.861 bits (1091), Expect = 2.266e-118 Identity = 201/233 (86.27%), Postives = 220/233 (94.42%), Query Frame = 3 Query: 3 ACVGYTVFSIISIIVIPLMFPKLKWYYVVVAYILAPSLSFCNAYGAGLTDMNMAYNYGKVALFVLAALSGKENGVVAGLVGCGLIKSIVSISSDLMHDFKTGHLTLTSPRSMLVSQAIGTAIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIPLPMAMAVPFLVGAYFAIDMCLGSLVVFAWH 701 A VGY FS++SII IP+MFP+LKWY++VVAY+LAPSL F NAYGAGLTDMNMAYNYGKVALF+LAA++GK+NGVVAGLVGCGLIKSIVSISSDLMHDFKTGHLTLTSPRSMLVSQAIGTAIGCVVAPLTFFLFYKAFDVGN +GEYKAPYA+VYRNMAILGVEGFSALPQHCLQLCYGFFAFA+AANL+RD P KI W+PLPMAMAVPFLVG YFAIDMC+GSL+VFAW+ Sbjct: 391 AAVGYAAFSVVSIIAIPIMFPELKWYFIVVAYMLAPSLGFSNAYGAGLTDMNMAYNYGKVALFILAAMAGKQNGVVAGLVGCGLIKSIVSISSDLMHDFKTGHLTLTSPRSMLVSQAIGTAIGCVVAPLTFFLFYKAFDVGNQEGEYKAPYALVYRNMAILGVEGFSALPQHCLQLCYGFFAFAVAANLVRDRLPDKIGNWVPLPMAMAVPFLVGGYFAIDMCVGSLIVFAWN 623
BLAST of CX298871 vs. ExPASy Swiss-Prot
Match: YSL2_ARATH (Metal-nicotianamine transporter YSL2 OS=Arabidopsis thaliana GN=YSL2 PE=2 SV=1) HSP 1 Score: 408.683 bits (1049), Expect = 1.680e-113 Identity = 193/235 (82.13%), Postives = 217/235 (92.34%), Query Frame = 3 Query: 3 ACVGYTVFSIISIIVIPLMFPKLKWYYVVVAYILAPSLSFCNAYGAGLTDMNMAYNYGKVALFVLAALSGKENGVVAGLVGCGLIKSIVSISSDLMHDFKTGHLTLTSPRSMLVSQAIGTAIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIPLPMAMAVPFLVGAYFAIDMCLGSLVVFAWHKL 707 ACVGY FS++SII IPLMFP+LKWY+V+VAY+LAPSLSFCNAYGAGLTDMNMAYNYGK ALFV+AAL+GK +GVVAG+V CGLIKSIVS+S+DLMHDFKTGHLT TSPRSMLV+QAIGTAIGCVVAPLTFFLFYKAFDVGN +GEYKAPYA++YRNMAI+GV+G SALP+HCL+LCYGFFAFA+AANL RDL P K KWIPLPMAMAVPFLVG FAIDMC+GSLVV+ W K+ Sbjct: 383 ACVGYLFFSLVSIIAIPLMFPQLKWYFVLVAYLLAPSLSFCNAYGAGLTDMNMAYNYGKAALFVMAALAGKNDGVVAGMVACGLIKSIVSVSADLMHDFKTGHLTQTSPRSMLVAQAIGTAIGCVVAPLTFFLFYKAFDVGNQNGEYKAPYAMIYRNMAIIGVQGPSALPKHCLELCYGFFAFAVAANLARDLLPDKPGKWIPLPMAMAVPFLVGGSFAIDMCIGSLVVYVWKKV 617
BLAST of CX298871 vs. ExPASy Swiss-Prot
Match: YSL9_ORYSJ (Probable metal-nicotianamine transporter YSL9 OS=Oryza sativa subsp. japonica GN=YSL9 PE=2 SV=2) HSP 1 Score: 394.045 bits (1011), Expect = 4.283e-109 Identity = 177/230 (76.96%), Postives = 210/230 (91.30%), Query Frame = 3 Query: 12 GYTVFSIISIIVIPLMFPKLKWYYVVVAYILAPSLSFCNAYGAGLTDMNMAYNYGKVALFVLAALSGKENGVVAGLVGCGLIKSIVSISSDLMHDFKTGHLTLTSPRSMLVSQAIGTAIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIPLPMAMAVPFLVGAYFAIDMCLGSLVVFAWH 701 GY + I++I IP+MF ++KWYYVV+AY+LAP+L FCNAYGAGLTD+NMAYNYGK+ALF+LAA +GK++GVVAGLVGCGL+KS+VSIS+DLMHDFKTGHLTLTSPRSM+++QAIGT +GCV++PLTFFLFY AFD+GNP+G +KAPYA+VYRNMAILGVEGFSALPQHCLQLCYGFF FA+AANL RDL P K +W+PLPMAM VPFLVGA FAIDMC+GSL+VF WH Sbjct: 406 GYLGLTFIAVIAIPMMFHEMKWYYVVIAYLLAPALGFCNAYGAGLTDINMAYNYGKIALFILAAWAGKDSGVVAGLVGCGLVKSLVSISADLMHDFKTGHLTLTSPRSMIIAQAIGTVMGCVISPLTFFLFYSAFDIGNPEGYWKAPYALVYRNMAILGVEGFSALPQHCLQLCYGFFGFAVAANLTRDLCPPKYGRWVPLPMAMGVPFLVGASFAIDMCIGSLIVFTWH 635
BLAST of CX298871 vs. ExPASy Swiss-Prot
Match: YSL16_ORYSJ (Probable metal-nicotianamine transporter YSL16 OS=Oryza sativa subsp. japonica GN=YSL16 PE=2 SV=2) HSP 1 Score: 381.333 bits (978), Expect = 2.873e-105 Identity = 172/234 (73.50%), Postives = 209/234 (89.32%), Query Frame = 3 Query: 3 ACVGYTVFSIISIIVIPLMFPKLKWYYVVVAYILAPSLSFCNAYGAGLTDMNMAYNYGKVALFVLAALSGKENGVVAGLVGCGLIKSIVSISSDLMHDFKTGHLTLTSPRSMLVSQAIGTAIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIPLPMAMAVPFLVGAYFAIDMCLGSLVVFAWHK 704 A GYT+ S+I++++IP+MF ++KWYYV++AY+LAP+L FCNAYG GLTDMNM YNYGK+ALF+ AA +GK++GVVAGLVGCGL+K +V IS+DLMHDFKTGHLTLTSPRSMLV Q +GT +GCVVAPLTFFLFYKAFDVG+P+G +KAPYA++YRNMAI+GVEGFSALP+HCLQLC GFFAFA+ ANL RD P++ +++PLPMAMAVPFLVGA FAIDMC GSLVVF WH+ Sbjct: 394 AYTGYTLLSVIAVVLIPVMFRQVKWYYVIIAYLLAPALGFCNAYGTGLTDMNMGYNYGKIALFIFAAWAGKDDGVVAGLVGCGLVKQLVLISADLMHDFKTGHLTLTSPRSMLVGQVVGTLMGCVVAPLTFFLFYKAFDVGDPNGYWKAPYALIYRNMAIIGVEGFSALPRHCLQLCAGFFAFAVLANLARDFLPRRYGRYMPLPMAMAVPFLVGASFAIDMCAGSLVVFLWHR 627
BLAST of CX298871 vs. ExPASy Swiss-Prot
Match: YSL1_ARATH (Metal-nicotianamine transporter YSL1 OS=Arabidopsis thaliana GN=YSL1 PE=2 SV=2) HSP 1 Score: 377.867 bits (969), Expect = 3.176e-104 Identity = 167/235 (71.06%), Postives = 207/235 (88.09%), Query Frame = 3 Query: 3 ACVGYTVFSIISIIVIPLMFPKLKWYYVVVAYILAPSLSFCNAYGAGLTDMNMAYNYGKVALFVLAALSGKENGVVAGLVGCGLIKSIVSISSDLMHDFKTGHLTLTSPRSMLVSQAIGTAIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIPLPMAMAVPFLVGAYFAIDMCLGSLVVFAWHKL 707 A GY F+ +S +V+PL+FP+LKWYYV+VAYI APSL+FCNAYGAGLTD+NMAYNYGK+ LFV+AA++G+ENGVVAGL GCGLIKS+VS+S LM DFKT H T+TSP++M SQ IGT +GC+V PL+FFLFYKAFD+GNP+GE+KAPYA++YRNMAILGV+GFSALP HCLQ+CYGFF FA+ N++RDL+P KI +++PLP AMAVPFLVGAYFAIDMC+G+L+VF W K+ Sbjct: 393 AVSGYLTFAAVSTVVVPLIFPQLKWYYVIVAYIFAPSLAFCNAYGAGLTDINMAYNYGKIGLFVIAAVTGRENGVVAGLAGCGLIKSVVSVSCILMQDFKTAHYTMTSPKAMFASQMIGTVVGCIVTPLSFFLFYKAFDIGNPNGEFKAPYALIYRNMAILGVQGFSALPLHCLQMCYGFFGFAVLVNVVRDLTPAKIGRFMPLPTAMAVPFLVGAYFAIDMCVGTLIVFVWEKM 627
BLAST of CX298871 vs. ExPASy Swiss-Prot
Match: YSL2_ORYSJ (Metal-nicotianamine transporter YSL2 OS=Oryza sativa subsp. japonica GN=YSL2 PE=2 SV=2) HSP 1 Score: 373.629 bits (958), Expect = 5.990e-103 Identity = 167/235 (71.06%), Postives = 206/235 (87.66%), Query Frame = 3 Query: 3 ACVGYTVFSIISIIVIPLMFPKLKWYYVVVAYILAPSLSFCNAYGAGLTDMNMAYNYGKVALFVLAALSGKENGVVAGLVGCGLIKSIVSISSDLMHDFKTGHLTLTSPRSMLVSQAIGTAIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIPLPMAMAVPFLVGAYFAIDMCLGSLVVFAWHKL 707 A GY + SI+++I IP+MF ++KWYYVVVA++LAP L F NAYG GLTDMNM+YNYGK+ALF+ AA G++NGV+AGLVGCG++K +V +S+DLMHDFKTGHLTLTSPRSMLV QAIGTA+GC++APLTF LFYKAFD+GNPDG +KAPYA+++RNMAILGVEGFSALP+HCL+L GFFAF++ NL+RD P+K ++PLP AMAVPFLVGA FAIDMC+GSL+VFAWHK+ Sbjct: 393 AYAGYALLSIVAVIAIPIMFQQVKWYYVVVAFVLAPVLGFSNAYGTGLTDMNMSYNYGKIALFIFAAWGGRDNGVIAGLVGCGIVKQLVQVSADLMHDFKTGHLTLTSPRSMLVGQAIGTAMGCIIAPLTFLLFYKAFDIGNPDGYWKAPYALIFRNMAILGVEGFSALPKHCLELSAGFFAFSVLINLMRDFLPRKYRDYVPLPTAMAVPFLVGANFAIDMCVGSLIVFAWHKI 627
BLAST of CX298871 vs. ExPASy Swiss-Prot
Match: YSL15_ORYSJ (Iron-phytosiderophore transporter YSL15 OS=Oryza sativa subsp. japonica GN=YSL15 PE=2 SV=1) HSP 1 Score: 343.199 bits (879), Expect = 8.670e-94 Identity = 158/232 (68.10%), Postives = 193/232 (83.19%), Query Frame = 3 Query: 12 GYTVFSIISIIVIPLMFPKLKWYYVVVAYILAPSLSFCNAYGAGLTDMNMAYNYGKVALFVLAALSGKENGVVAGLVGCGLIKSIVSISSDLMHDFKTGHLTLTSPRSMLVSQAIGTAIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIPLPMAMAVPFLVGAYFAIDMCLGSLVVFAWHKL 707 GY + SII++I IP+MF ++KWYYV++AY L P L F N+YGAGLTD+NM YNYGK+ALFV AA +GK+NGV+AGLV L+K +V +S+DLMHD KTGHLTLTSPRSMLV + IGT IGC +APLTF LFY+AFD+GNPDG +KAPYA++YRNMAILG+EG SALP+HCL L GFFAFA+ N+ RD P + K +PLP AMAVPFLVGA FAIDMC+GSLV+FAW+K+ Sbjct: 394 GYFLLSIIAVITIPIMFRQVKWYYVIIAYALGPVLGFANSYGAGLTDINMGYNYGKIALFVFAAWAGKDNGVIAGLVVGTLVKQLVLVSADLMHDLKTGHLTLTSPRSMLVGELIGTGIGCFIAPLTFMLFYRAFDIGNPDGYWKAPYALIYRNMAILGIEGISALPKHCLSLSVGFFAFAVLTNVARDALPARYKKLVPLPTAMAVPFLVGASFAIDMCVGSLVLFAWNKM 625
BLAST of CX298871 vs. ExPASy Swiss-Prot
Match: YS1_MAIZE (Iron-phytosiderophore transporter yellow stripe 1 OS=Zea mays GN=YS1 PE=2 SV=1) HSP 1 Score: 342.813 bits (878), Expect = 1.132e-93 Identity = 156/235 (66.38%), Postives = 194/235 (82.55%), Query Frame = 3 Query: 3 ACVGYTVFSIISIIVIPLMFPKLKWYYVVVAYILAPSLSFCNAYGAGLTDMNMAYNYGKVALFVLAALSGKENGVVAGLVGCGLIKSIVSISSDLMHDFKTGHLTLTSPRSMLVSQAIGTAIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIPLPMAMAVPFLVGAYFAIDMCLGSLVVFAWHKL 707 A GY +++S ++IP MF ++KWYYV+VAY+LAP L F N+YG GLTD+NMAYNYGK+ALF+ AA +G++NGV+AGL G L+K +V S+DLMHDFKTGHLT+TSPRS+LV+Q IGTA+GCVVAPLTF LFY AFD+GNP G +KAPY ++YRNMAILGVEGFS LP+HCL L GFFAFA ++ RD+ P+K A+++PLPMAMAVPFLVG FAIDMC+GSL VF W K+ Sbjct: 401 AYAGYAALTVVSAVIIPHMFRQVKWYYVIVAYVLAPLLGFANSYGTGLTDINMAYNYGKIALFIFAAWAGRDNGVIAGLAGGTLVKQLVMASADLMHDFKTGHLTMTSPRSLLVAQFIGTAMGCVVAPLTFLLFYNAFDIGNPTGYWKAPYGLIYRNMAILGVEGFSVLPRHCLALSAGFFAFAFVFSVARDVLPRKYARFVPLPMAMAVPFLVGGSFAIDMCVGSLAVFVWEKV 635
BLAST of CX298871 vs. ExPASy Swiss-Prot
Match: YSL6_ORYSJ (Probable metal-nicotianamine transporter YSL6 OS=Oryza sativa subsp. japonica GN=YSL6 PE=2 SV=1) HSP 1 Score: 321.627 bits (823), Expect = 2.701e-87 Identity = 141/232 (60.78%), Postives = 190/232 (81.90%), Query Frame = 3 Query: 12 GYTVFSIISIIVIPLMFPKLKWYYVVVAYILAPSLSFCNAYGAGLTDMNMAYNYGKVALFVLAALSGKENGVVAGLVGCGLIKSIVSISSDLMHDFKTGHLTLTSPRSMLVSQAIGTAIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIPLPMAMAVPFLVGAYFAIDMCLGSLVVFAWHKL 707 GY + IS +P++FP++KWY V+ AY++AP L+FCN+YG GLTD N+A YGK+ LF+ A+L G+ GV+AGL CG++ SIVS ++DLM DF+TG+LTL+SPRSM VSQ IGT +GC++APLTF+L++ AFD+GNPDG +KAPYA++YR M+ILGVEGFSALPQHCL +C FF AI NLLRD++PK ++K+IPLPMAMAVPF +GAYFAIDM +G++++F W ++ Sbjct: 398 GYVGLAAISTATVPMIFPQVKWYLVLCAYVVAPLLAFCNSYGCGLTDWNLASTYGKIGLFIFASLVGRSGGVIAGLAACGVMMSIVSTAADLMQDFRTGYLTLSSPRSMFVSQLIGTTLGCIIAPLTFWLYWTAFDIGNPDGMFKAPYAVIYREMSILGVEGFSALPQHCLAICSVFFVAAILINLLRDVTPKSVSKFIPLPMAMAVPFYIGAYFAIDMFVGTVILFVWERV 629
BLAST of CX298871 vs. ExPASy Swiss-Prot
Match: YSL6_ARATH (Probable metal-nicotianamine transporter YSL6 OS=Arabidopsis thaliana GN=YSL6 PE=2 SV=2) HSP 1 Score: 319.316 bits (817), Expect = 1.341e-86 Identity = 138/235 (58.72%), Postives = 193/235 (82.13%), Query Frame = 3 Query: 3 ACVGYTVFSIISIIVIPLMFPKLKWYYVVVAYILAPSLSFCNAYGAGLTDMNMAYNYGKVALFVLAALSGKENGVVAGLVGCGLIKSIVSISSDLMHDFKTGHLTLTSPRSMLVSQAIGTAIGCVVAPLTFFLFYKAFDVGNPDGEYKAPYAIVYRNMAILGVEGFSALPQHCLQLCYGFFAFAIAANLLRDLSPKKIAKWIPLPMAMAVPFLVGAYFAIDMCLGSLVVFAWHKL 707 A GY + IS IP++FP LKWY+V+ +Y +AP+L+FCN+YG GLTD ++A YGK+ LF++A++ G + GV+AGL CG++ SIVS ++DLM DFKTG+LTL+S +SM VSQ +GTA+GCV+APLTF+LF+ AFD+G+P+G YKAPYA+++R MAILG+EGF+ LP+HCL LCYGFF A+ NLLRD++P KI+++IP+PMAMAVPF +GAYFAIDM +G++++F W ++ Sbjct: 393 AIAGYVGLAAISTATIPIIFPPLKWYFVLCSYFIAPALAFCNSYGTGLTDWSLASTYGKIGLFIIASVVGSDGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLVGTAMGCVIAPLTFWLFWTAFDIGDPNGPYKAPYAVIFREMAILGIEGFAELPKHCLALCYGFFIAALIVNLLRDITPPKISQFIPIPMAMAVPFYIGAYFAIDMFVGTVILFVWERI 627 The following BLAST results are available for this feature:
BLAST of CX298871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX298871 ID=CX298871; Name=CX298871; organism=Citrus clementina; type=EST; length=739bpback to top |