CX298887

Overview
NameCX298887
Unique NameCX298887
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX298887 vs. ExPASy Swiss-Prot
Match: C3H48_ARATH (Zinc finger CCCH domain-containing protein 48 OS=Arabidopsis thaliana GN=ZFWD1 PE=2 SV=1)

HSP 1 Score: 392.889 bits (1008), Expect = 8.850e-109
Identity = 177/234 (75.64%), Postives = 208/234 (88.89%), Query Frame = 3
Query:    3 GSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGMLALCGMPDSEGKPVLLCSCK*HSVRFYDLPSFAERG 704
            GSDKLY+ SKDETVR+WDCASGQC GV+NLGGEVGC+ISEGPW+ +G+ N VKAWN Q N DLSL+GPVGQVY++ VG DLLFAGTQDG+IL W++N TT+CF+PAASL GH+LAVVSL VGAN+LYSG+MDNSI+VW+L+ LQCIQTLTEHTSVVMSL+CWDQFLLSCSLD T+K+W AT+ GNLEVTYTH EE+G+LALCG+ D+E KPVLLCSC  +S+  YDLPSF ERG
Sbjct:  155 GSDKLYTASKDETVRIWDCASGQCTGVLNLGGEVGCIISEGPWLLVGMPNLVKAWNIQNNADLSLNGPVGQVYSLVVGTDLLFAGTQDGSILVWRYNSTTSCFDPAASLLGHTLAVVSLYVGANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLICWDQFLLSCSLDNTVKIWAATEGGNLEVTYTHKEEYGVLALCGVHDAEAKPVLLCSCNDNSLHLYDLPSFTERG 388          
BLAST of CX298887 vs. ExPASy Swiss-Prot
Match: C3H63_ARATH (Zinc finger CCCH domain-containing protein 63 OS=Arabidopsis thaliana GN=ZFWD2 PE=2 SV=1)

HSP 1 Score: 380.178 bits (975), Expect = 5.936e-105
Identity = 171/240 (71.25%), Postives = 207/240 (86.25%), Query Frame = 3
Query:    3 GSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGMLALCGMPDSEGKPVLLCSCK*HSVRFYDLPS------FAERG 704
            GSDKLY+GSKDET+RVWDCASGQC GV+ LGGE+GC++SEGPW+ +G+ N VKAWN +TN D SLSGPVGQVY++ VG DLLFAGTQDG+ILAW++N  TNCFEP+ASL GH+LAVV+L VGAN+LYSGSMD +I+VW+L+ LQCIQTLT+H+SVVMSL+CWDQFLLSCSLD T+K+W A + GNLEVTYTH EEHG+LALCG+ D+E KPVLLC+C  +++R YDLPS      F ERG
Sbjct:  162 GSDKLYTGSKDETLRVWDCASGQCTGVLKLGGEIGCVLSEGPWLLVGMPNLVKAWNIETNADQSLSGPVGQVYSLVVGTDLLFAGTQDGSILAWRYNAATNCFEPSASLTGHTLAVVTLYVGANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLICWDQFLLSCSLDNTVKIWAAIEGGNLEVTYTHKEEHGVLALCGVHDAEAKPVLLCACNDNTLRLYDLPSLGLFIRFTERG 401          
BLAST of CX298887 vs. ExPASy Swiss-Prot
Match: C3H17_ORYSJ (Zinc finger CCCH domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=Os02g0677700 PE=2 SV=2)

HSP 1 Score: 372.089 bits (954), Expect = 1.617e-102
Identity = 172/234 (73.50%), Postives = 203/234 (86.75%), Query Frame = 3
Query:    3 GSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGMLALCGMPDSEGKPVLLCSCK*HSVRFYDLPSFAERG 704
            GSDKLYSGSKD TVR+WDC +GQCAGVIN+G E+GCMISEGPW+F+G+ + VK WN QT  +++L+GP GQVYA+AVGN+LLFA TQDG ILAW+F+  TN FEPAASL GH LAVVSLVVGA +LYS SMD +IRVW+L TLQCIQTL++HT VVMS+LCWDQFLLSCSLD+TIKVW AT+SG+LEVTYTH EEHG LAL GMPD++ KPVLLCS   ++VR YDLPSF++RG
Sbjct:  161 GSDKLYSGSKDGTVRMWDCQTGQCAGVINMGREIGCMISEGPWLFVGIPDAVKVWNMQTQAEMNLTGPTGQVYALAVGNELLFAATQDGRILAWRFSAATNGFEPAASLVGHQLAVVSLVVGAMRLYSASMDKTIRVWDLATLQCIQTLSDHTGVVMSVLCWDQFLLSCSLDQTIKVWAATESGSLEVTYTHKEEHGALALSGMPDAQSKPVLLCSLNDNTVRLYDLPSFSDRG 394          
BLAST of CX298887 vs. ExPASy Swiss-Prot
Match: C3H62_ARATH (Zinc finger CCCH domain-containing protein 62 OS=Arabidopsis thaliana GN=ZFWD4 PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 7.843e-65
Identity = 126/239 (52.72%), Postives = 162/239 (67.78%), Query Frame = 3
Query:    3 GSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSL--SGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNC--FEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGML-ALCGMPDSEGKPVLLCSCK*HSVRFYDLPSFAERG 704
            GSDKL+S S D T+RVWDC SGQC   INL  E G +ISEGPW+F+G+ N +KA+N QT+ DL L  +G VGQV AM + N +LFAGT  G+IL WK    +    F+   SL+GHS  V    VG   LYSGS+D +I++W+L TLQCI TL +HT  V SLLCWD+ L+S SLD TIKVW  +++G L+V  T  +E   + AL GM D+E KP++ CS +  +V  +DLPSF ERG
Sbjct:  142 GSDKLFSVSIDGTLRVWDCNSGQCVHSINLDAEAGSLISEGPWVFLGLPNAIKAFNVQTSQDLHLQAAGVVGQVNAMTIANGMLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLCWDKCLISSSLDGTIKVWAYSENGILKVVQTRRQEQSSVHALSGMHDAEAKPIIFCSYQNGTVGIFDLPSFQERG 380          
BLAST of CX298887 vs. ExPASy Swiss-Prot
Match: C3H59_ARATH (Zinc finger CCCH domain-containing protein 59 OS=Arabidopsis thaliana GN=ZFWD3 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.295e-63
Identity = 121/236 (51.27%), Postives = 160/236 (67.80%), Query Frame = 3
Query:    3 GSDKLYSGSKDETVRVWDCASGQCAGVINLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDLSLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVT-TNCFEPAASLKGH-SLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGMLALCGMPDSEGKPVLLCSCK*HSVRFYDLPSFAERG 704
            GSDKL+S S D T+ +WDC SGQC   INL  E G +ISEGPW+F+G+ N VKA+N Q + D+ L G VGQV+AM   N +LFAGT  G+IL WK   + ++ F+   SL+GH S  V   VVG   LYSGS+D +I+VW+L TLQC  TL +H   V SLLCWD+ L+S SLD TIK+W  +++ +L+V  T  +E  +  LCGM D+E KP++ CS +  +V  +DLPSF ERG
Sbjct:  198 GSDKLFSVSGDGTLLIWDCNSGQCVRSINLQAEAGSLISEGPWVFLGLPNAVKAFNVQNSKDVHLEGVVGQVHAMTAANGMLFAGTSSGSILVWKATDSESDPFKYLTSLEGHHSGEVTCFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLLCWDKCLISSSLDGTIKLWACSENESLKVVQTRKQELSVHTLCGMHDAEAKPIMFCSYQNGAVGIFDLPSFEERG 433          
BLAST of CX298887 vs. ExPASy Swiss-Prot
Match: FBXW7_MOUSE (F-box/WD repeat-containing protein 7 OS=Mus musculus GN=Fbxw7 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.004e-19
Identity = 61/182 (33.52%), Postives = 102/182 (56.04%), Query Frame = 3
Query:   12 KLYSGSKDETVRVWDCASGQCAGVINLG--GEVGCMISEGPWIFIGVTNF-VKAWNTQTNTDL-SLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTL---TEHTSVVMSLLCWDQFLLSCSLDKTIKVW 536
            ++ SGS+D T+RVWD  +GQC  V+ +G    V C+  +G  +  G  +F VK W+ +T T L +L G   +VY++      + +G+ D +I  W    T NC     +L GH      + +  N L SG+ D+++++W+++T QC+QTL   ++H S V  L     F+++ S D T+K+W
Sbjct:  395 RVVSGSRDATLRVWDIETGQCLHVL-MGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVE-TGNCIH---TLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLW 571          

HSP 2 Score: 84.3445 bits (207), Expect = 6.733e-16
Identity = 56/177 (31.64%), Postives = 86/177 (48.59%), Query Frame = 3
Query:   15 LYSGSKDETVRVWDCASGQCAGVI-NLGGEVGCMISEGPWIFIGVTNF-VKAWNTQTNTDLS-LSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVW 536
            + SGS D T++VW+  +G+C   +      V CM      +  G  +  ++ W+ +T   L  L G V  V  +      + +G  D  +  W     T C     +L+GH+  V SL      + SGS+D SIRVW++ET  CI TLT H S+   +   D  L+S + D T+K+W
Sbjct:  356 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET-CLH---TLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIW 528          
BLAST of CX298887 vs. ExPASy Swiss-Prot
Match: MHCKB_DICDI (Myosin heavy chain kinase B OS=Dictyostelium discoideum GN=mhkB PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.311e-19
Identity = 67/217 (30.88%), Postives = 103/217 (47.47%), Query Frame = 3
Query:   15 LYSGSKDETVRVWDCASGQCAGVINLGGE---VGCMISEGPWIFIGVTN-FVKAWNTQT-NTDLSLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGMLALCGMPDSEGKPVLLCS 650
            L+SGS D +++VWD    +C  +  L G    V  ++    ++F G ++  +K W+ +T     +L      V  + +    LF+G+ D  I  W        F    +LKGH+  V ++ +    LYSGS D +IRVWNL++L+C  TL  H   V  ++  D+ L + S D TIK+W   D   L    T  E H     C     + K V+ CS
Sbjct:  515 LFSGSSDHSIKVWDLKKLRC--IFTLEGHDKPVHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISGQYLFSGSNDKTIKVWDLKT----FRCNYTLKGHTKWVTTICILGTNLYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVICDKLLFTASDDNTIKIW---DLETLRCN-TTLEGHNATVQCLAVWEDKKCVISCS 721          

HSP 2 Score: 96.6709 bits (239), Expect = 1.311e-19
Identity = 56/179 (31.28%), Postives = 97/179 (54.19%), Query Frame = 3
Query:   15 LYSGSKDETVRVWDCASGQCAGVINLGGE-VGCMISEGPWIFIGVTN-FVKAWNTQT-NTDLSLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWD--QFLLSCSLDKTIKVW 536
            L+SGS D+T++VWD  + +C   +      V  +   G ++F G  +  +K W+ +T   + +L G    V  + +    L++G+ D  I  W         E +A+L+GH   V  +V+    L++ S DN+I++W+LETL+C  TL  H + V  L  W+  + ++SCS D++I+VW
Sbjct:  555 LFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISGQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTNLYSGSYDKTIRVWNLK----SLECSATLRGHDRWVEHMVICDKLLFTASDDNTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRVW 729          

HSP 3 Score: 78.9518 bits (193), Expect = 2.829e-14
Identity = 47/117 (40.17%), Postives = 67/117 (57.26%), Query Frame = 3
Query:  225 MAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYT 575
            + + ++LLF G  D +I  + +   +   E   +LKGH   V S+      L+SGS D+SI+VW+L+ L+CI TL  H   V ++L  D++L S S DKTIKVW   D   LE  YT
Sbjct:  466 LCICDNLLFTGCSDNSIRVYDYK--SQNMECVQTLKGHEGPVESICYNDQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLNDKYLFSGSSDKTIKVW---DLKTLECKYT 577          
BLAST of CX298887 vs. ExPASy Swiss-Prot
Match: FBXW7_HUMAN (F-box/WD repeat-containing protein 7 OS=Homo sapiens GN=FBXW7 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.311e-19
Identity = 61/182 (33.52%), Postives = 101/182 (55.49%), Query Frame = 3
Query:   12 KLYSGSKDETVRVWDCASGQCAGVINLG--GEVGCMISEGPWIFIGVTNF-VKAWNTQTNTDL-SLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTL---TEHTSVVMSLLCWDQFLLSCSLDKTIKVW 536
            ++ SGS+D T+RVWD  +GQC  V+ +G    V C+  +G  +  G  +F VK W+ +T T L +L G   +VY++      + +G+ D +I  W    T NC     +L GH      + +  N L SG+ D+++++W+++T QC+QTL    +H S V  L     F+++ S D T+K+W
Sbjct:  473 RVVSGSRDATLRVWDIETGQCLHVL-MGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVE-TGNCIH---TLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 649          

HSP 2 Score: 84.3445 bits (207), Expect = 6.733e-16
Identity = 56/177 (31.64%), Postives = 86/177 (48.59%), Query Frame = 3
Query:   15 LYSGSKDETVRVWDCASGQCAGVI-NLGGEVGCMISEGPWIFIGVTNF-VKAWNTQTNTDLS-LSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVW 536
            + SGS D T++VW+  +G+C   +      V CM      +  G  +  ++ W+ +T   L  L G V  V  +      + +G  D  +  W     T C     +L+GH+  V SL      + SGS+D SIRVW++ET  CI TLT H S+   +   D  L+S + D T+K+W
Sbjct:  434 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET-CLH---TLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIW 606          
BLAST of CX298887 vs. ExPASy Swiss-Prot
Match: MHCKA_DICDI (Myosin heavy chain kinase A OS=Dictyostelium discoideum GN=mhkA PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.229e-18
Identity = 64/209 (30.62%), Postives = 100/209 (47.85%), Query Frame = 3
Query:    6 SDKLYSGSKDETVRVWDCASGQCAGVINL---GGEVGCMISEGPWIF-IGVTNFVKAWNTQTNTDLSLSGPVGQVY--AMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEHGMLALCGM 614
            S+ +++ S D T++V    SG    +  L    GEV C+++   ++F       +K W+  T  ++     V   Y   +A+    LF+G  D  I  W     +  F    +++GH   V+SL   A+ L+S S DN I++W+L    CI TL  H + V S +  D++L S S D +IKVW   D   LE  YT  + H +   C M
Sbjct:  922 SNYIFTSSPDNTIKVHIIRSGNTKCIETLVGHTGEVNCVVANEKYLFSCSYDKTIKVWDLSTFKEIKSFEGVHTKYIKTLALSGRYLFSGGNDQIIYVWDTETLSMLF----NMQGHEDWVLSLHCTASYLFSTSKDNVIKIWDLSNFSCIDTLKGHWNSVSSCVVKDRYLYSGSEDNSIKVW---DLDTLECVYTIPKSHSLGVKCLM 1123          
BLAST of CX298887 vs. ExPASy Swiss-Prot
Match: FBXW7_DROME (F-box/WD repeat-containing protein 7 OS=Drosophila melanogaster GN=ago PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.733e-17
Identity = 59/181 (32.60%), Postives = 96/181 (53.04%), Query Frame = 3
Query:   12 KLYSGSKDETVRVWDCASGQCAGV-INLGGEVGCMISEGPWIFIGVTNF-VKAWNTQTNTDL-SLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLT---EHTSVVMSLLCWDQFLLSCSLDKTIKVW 536
            K+ SGS+D T+RVWD   G C  V +     V C+  +G  I  G  ++ VK W+ +    L +L G   +VY++      + +G+ D +I  W    T NC     +L GH      + +  N L SG+ D++++VW++ T QC+QTL+   +H S V  L    +F+++ S D T+K+W
Sbjct: 1087 KVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGLHVVSGSLDTSIRVWDVE-TGNC---KHTLMGHQSLTSGMELRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRFVVTSSDDGTVKLW 1263          

HSP 2 Score: 82.8037 bits (203), Expect = 1.959e-15
Identity = 59/195 (30.26%), Postives = 89/195 (45.64%), Query Frame = 3
Query:   15 LYSGSKDETVRVWDCASGQCAGVIN-LGGEVGCMISEGPWIFIGVTNF-VKAWNTQTNTDLS-LSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVTYTHNEEH 590
            + SGS D T++VWD  SG C   +      V CM   G  +  G  +  ++ W+ +  + L  L G +  V  +     L+ +G  D  +  W       C     +L+GH+  V SL      + SGS+D SIRVW++ET  C  TL  H S+   +      L+S + D T+KVW  T    L+     N+ H
Sbjct: 1048 IISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPE-RQECLH---TLQGHTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHH 1238          

HSP 3 Score: 73.9442 bits (180), Expect = 9.099e-13
Identity = 51/190 (26.84%), Postives = 90/190 (47.37%), Query Frame = 3
Query:    9 DKLYSGSKDETVRVWDCASGQCAGVI--NLGGEVGCMISEGPWIFIGVTNFVKAWNTQTNTDL-SLSGPVGQVYAMAVGNDLLFAGTQDGAILAWKFNVTTNCFEPAASLKGHSLAVVSLVVGANKLYSGSMDNSIRVWNLETLQCIQTLTEHTSVVMSLLCWDQFLLSCSLDKTIKVWFATDSGNLEVT 569
            +++ SGS D T++VW   +G+C   +  + GG     +S    I       +K W+  +   + +L G    V  M +    + +G++D  +  W      +C      L GH  AV  +      + SG+ D  +++W+ E  +C+ TL  HT+ V SL      ++S SLD +I+VW   ++GN + T
Sbjct: 1006 NRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVVSGSRDATLRVWDIE-QGSCLH---VLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGLHVVSGSLDTSIRVW-DVETGNCKHT 1190          
The following BLAST results are available for this feature:
BLAST of CX298887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
C3H48_ARATH8.850e-10975.64Zinc finger CCCH domain-containing protein 48 OS=A... [more]
C3H63_ARATH5.936e-10571.25Zinc finger CCCH domain-containing protein 63 OS=A... [more]
C3H17_ORYSJ1.617e-10273.50Zinc finger CCCH domain-containing protein 17 OS=O... [more]
C3H62_ARATH7.843e-6552.72Zinc finger CCCH domain-containing protein 62 OS=A... [more]
C3H59_ARATH3.295e-6351.27Zinc finger CCCH domain-containing protein 59 OS=A... [more]
FBXW7_MOUSE1.004e-1933.52F-box/WD repeat-containing protein 7 OS=Mus muscul... [more]
MHCKB_DICDI1.311e-1930.88Myosin heavy chain kinase B OS=Dictyostelium disco... [more]
FBXW7_HUMAN1.311e-1933.52F-box/WD repeat-containing protein 7 OS=Homo sapie... [more]
MHCKA_DICDI3.229e-1830.62Myosin heavy chain kinase A OS=Dictyostelium disco... [more]
FBXW7_DROME2.733e-1732.60F-box/WD repeat-containing protein 7 OS=Drosophila... [more]

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Properties
Property NameValue
Genbank descriptionC06016F04SK RindPdig24 Citrus clementina cDNA clone C06016F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX298887 ID=CX298887; Name=CX298887; organism=Citrus clementina; type=EST; length=705bp
AGGGTTCAGATAAGCTTTATTCTGGTAGTAAAGACGAGACTGTTAGAGTT
TGGGATTGTGCTTCTGGACAGTGTGCAGGTGTGATTAATCTTGGTGGTGA
AGTTGGTTGCATGATTAGTGAAGGTCCTTGGATTTTCATTGGTGTAACAA
ATTTTGTCAAGGCTTGGAACACCCAAACTAATACTGACCTGAGTCTTAGT
GGACCTGTGGGACAAGTTTACGCAATGGCTGTCGGTAATGATTTACTCTT
CGCTGGTACGCAGGATGGGGCTATATTGGCATGGAAGTTTAATGTTACCA
CCAACTGCTTTGAACCAGCTGCGTCGCTCAAAGGTCACTCTCTTGCAGTG
GTATCTTTAGTTGTCGGAGCTAATAAGCTTTACTCTGGTTCCATGGACAA
TTCAATAAGAGTGTGGAACCTTGAAACTTTGCAGTGCATACAGACTCTAA
CAGAGCACACTTCAGTCGTGATGTCACTTCTTTGCTGGGATCAGTTTCTT
TTATCATGTTCATTGGACAAAACAATAAAGGTGTGGTTTGCTACAGATAG
TGGAAACCTGGAAGTGACTTATACTCACAATGAAGAACATGGAATGCTTG
CCCTGTGTGGAATGCCTGATTCAGAAGGCAAGCCAGTCTTGTTGTGCTCT
TGCAAATGACACTCAGTCCGCTTCTATGATTTGCCATCGTTTGCTGAGAG
GGGTA
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