CX299033
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299033 vs. ExPASy Swiss-Prot
Match: PHG1B_DICDI (Putative phagocytic receptor 1b OS=Dictyostelium discoideum GN=phg1b PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.162e-22 Identity = 47/90 (52.22%), Postives = 63/90 (70.00%), Query Frame = 2 Query: 2 VALTYFQLAPEDHEWWWRSFLCGGSTGAFIXXXXXXXXXXRSDMSGFMQTSFFFGYMACICYGFFLMLGTVGFRASLLFVRHIYRSIKCE 271 VALTYFQL+ EDH+WWW SF+ GGST FI S M G +Q +F+F YM +C+ FF++LGTVGF +SL+FV+ IYR++K + Sbjct: 498 VALTYFQLSMEDHKWWWNSFINGGSTVVFIYMYSIYYYYYISHMYGLLQATFYFTYMLIVCFFFFILLGTVGFYSSLIFVKRIYRNLKSD 587
BLAST of CX299033 vs. ExPASy Swiss-Prot
Match: TM9S1_RAT (Transmembrane 9 superfamily member 1 OS=Rattus norvegicus GN=Tm9sf1 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.855e-20 Identity = 48/90 (53.33%), Postives = 60/90 (66.67%), Query Frame = 2 Query: 2 VALTYFQLAPEDHEWWWRSFLCGGSTGAFIXXXXXXXXXXRSDMSGFMQTSFFFGYMACICYGFFLMLGTVGFRASLLFVRHIYRSIKCE 271 +ALTYFQL+ ED+ WWWRS L GSTG FI RS+MSG +QT FFGY Y FFLMLGT+ F +SL F+R+IY ++K + Sbjct: 500 IALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIRYIYVNLKMD 589
BLAST of CX299033 vs. ExPASy Swiss-Prot
Match: TM9S1_PONAB (Transmembrane 9 superfamily member 1 OS=Pongo abelii GN=TM9SF1 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.855e-20 Identity = 48/90 (53.33%), Postives = 60/90 (66.67%), Query Frame = 2 Query: 2 VALTYFQLAPEDHEWWWRSFLCGGSTGAFIXXXXXXXXXXRSDMSGFMQTSFFFGYMACICYGFFLMLGTVGFRASLLFVRHIYRSIKCE 271 +ALTYFQL+ ED+ WWWRS L GSTG FI RS+MSG +QT FFGY Y FFLMLGT+ F +SL F+R+IY ++K + Sbjct: 517 IALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIRYIYVNLKMD 606
BLAST of CX299033 vs. ExPASy Swiss-Prot
Match: TM9S1_MOUSE (Transmembrane 9 superfamily member 1 OS=Mus musculus GN=Tm9sf1 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 1.855e-20 Identity = 48/90 (53.33%), Postives = 60/90 (66.67%), Query Frame = 2 Query: 2 VALTYFQLAPEDHEWWWRSFLCGGSTGAFIXXXXXXXXXXRSDMSGFMQTSFFFGYMACICYGFFLMLGTVGFRASLLFVRHIYRSIKCE 271 +ALTYFQL+ ED+ WWWRS L GSTG FI RS+MSG +QT FFGY Y FFLMLGT+ F +SL F+R+IY ++K + Sbjct: 517 IALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIRYIYVNLKMD 606
BLAST of CX299033 vs. ExPASy Swiss-Prot
Match: TM9S1_HUMAN (Transmembrane 9 superfamily member 1 OS=Homo sapiens GN=TM9SF1 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 1.855e-20 Identity = 48/90 (53.33%), Postives = 60/90 (66.67%), Query Frame = 2 Query: 2 VALTYFQLAPEDHEWWWRSFLCGGSTGAFIXXXXXXXXXXRSDMSGFMQTSFFFGYMACICYGFFLMLGTVGFRASLLFVRHIYRSIKCE 271 +ALTYFQL+ ED+ WWWRS L GSTG FI RS+MSG +QT FFGY Y FFLMLGT+ F +SL F+R+IY ++K + Sbjct: 517 IALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIRYIYVNLKMD 606
BLAST of CX299033 vs. ExPASy Swiss-Prot
Match: TM9S1_BOVIN (Transmembrane 9 superfamily member 1 OS=Bos taurus GN=TM9SF1 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.855e-20 Identity = 48/90 (53.33%), Postives = 60/90 (66.67%), Query Frame = 2 Query: 2 VALTYFQLAPEDHEWWWRSFLCGGSTGAFIXXXXXXXXXXRSDMSGFMQTSFFFGYMACICYGFFLMLGTVGFRASLLFVRHIYRSIKCE 271 +ALTYFQL+ ED+ WWWRS L GSTG FI RS+MSG +QT FFGY Y FFLMLGT+ F +SL F+R+IY ++K + Sbjct: 517 IALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARRSNMSGTVQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIRYIYVNLKMD 606
BLAST of CX299033 vs. ExPASy Swiss-Prot
Match: TM9S4_PONAB (Transmembrane 9 superfamily member 4 OS=Pongo abelii GN=TM9SF4 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 8.918e-15 Identity = 32/90 (35.56%), Postives = 53/90 (58.89%), Query Frame = 2 Query: 2 VALTYFQLAPEDHEWWWRSFLCGGSTGAFIXXXXXXXXXXRSDMSGFMQTSFFFGYMACICYGFFLMLGTVGFRASLLFVRHIYRSIKCE 271 + + YFQL ED+ WWWR+FL G + ++ + D+ F+ + +FGY A + F+L+ GT+GF A+ +FVR IY ++K + Sbjct: 553 IVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEFIPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 642
BLAST of CX299033 vs. ExPASy Swiss-Prot
Match: TM9S4_HUMAN (Transmembrane 9 superfamily member 4 OS=Homo sapiens GN=TM9SF4 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 8.918e-15 Identity = 32/90 (35.56%), Postives = 53/90 (58.89%), Query Frame = 2 Query: 2 VALTYFQLAPEDHEWWWRSFLCGGSTGAFIXXXXXXXXXXRSDMSGFMQTSFFFGYMACICYGFFLMLGTVGFRASLLFVRHIYRSIKCE 271 + + YFQL ED+ WWWR+FL G + ++ + D+ F+ + +FGY A + F+L+ GT+GF A+ +FVR IY ++K + Sbjct: 553 IVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEFIPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 642
BLAST of CX299033 vs. ExPASy Swiss-Prot
Match: TM9S4_BOVIN (Transmembrane 9 superfamily member 4 OS=Bos taurus GN=TM9SF4 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 8.918e-15 Identity = 32/90 (35.56%), Postives = 53/90 (58.89%), Query Frame = 2 Query: 2 VALTYFQLAPEDHEWWWRSFLCGGSTGAFIXXXXXXXXXXRSDMSGFMQTSFFFGYMACICYGFFLMLGTVGFRASLLFVRHIYRSIKCE 271 + + YFQL ED+ WWWR+FL G + ++ + D+ F+ + +FGY A + F+L+ GT+GF A+ +FVR IY ++K + Sbjct: 553 IVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEFIPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 642
BLAST of CX299033 vs. ExPASy Swiss-Prot
Match: TM9S4_RAT (Transmembrane 9 superfamily member 4 OS=Rattus norvegicus GN=Tm9sf4 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.595e-14 Identity = 31/90 (34.44%), Postives = 52/90 (57.78%), Query Frame = 2 Query: 2 VALTYFQLAPEDHEWWWRSFLCGGSTGAFIXXXXXXXXXXRSDMSGFMQTSFFFGYMACICYGFFLMLGTVGFRASLLFVRHIYRSIKCE 271 + + YFQL ED+ WWWR+FL G + ++ + D+ F+ + +FGY + F+L+ GT+GF A+ +FVR IY ++K + Sbjct: 554 IVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDIVEFIPSLLYFGYTTLMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 643 The following BLAST results are available for this feature:
BLAST of CX299033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299033 ID=CX299033; Name=CX299033; organism=Citrus clementina; type=EST; length=522bpback to top |