CX299034

Overview
NameCX299034
Unique NameCX299034
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length474
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX299034 vs. ExPASy Swiss-Prot
Match: DR111_ARATH (DNA-damage-repair/toleration protein DRT111, chloroplastic OS=Arabidopsis thaliana GN=DRT111 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 2.716e-22
Identity = 47/56 (83.93%), Postives = 53/56 (94.64%), Query Frame = 1 
Query:    1 AVRIFVQFESPEQTTKALIDLDGRFFGGRVVRATFYDEERFSKNELAPLPGEIPGF 168
            AVRIFVQF  PE+TTKAL+DLDGR+FGGR VRATFYDEE+FSKNELAP+PGEIPG+
Sbjct:  332 AVRIFVQFSRPEETTKALVDLDGRYFGGRTVRATFYDEEKFSKNELAPVPGEIPGY 387
The following BLAST results are available for this feature:
BLAST of CX299034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DR111_ARATH2.716e-2283.93DNA-damage-repair/toleration protein DRT111, chlor... [more]
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Properties
Property NameValue
Genbank descriptionC06018B09SK RindPdig24 Citrus clementina cDNA clone C06018B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299034 ID=CX299034; Name=CX299034; organism=Citrus clementina; type=EST; length=474bp
GCTGTCAGAATCTTTGTGCAGTTTGAGAGCCCAGAGCAAACAACAAAAGC
GCTCATTGACCTAGATGGTCGGTTCTTTGGGGGTAGGGTTGTCCGTGCTA
CATTTTATGATGAGGAGAGGTTTAGTAAAAATGAGTTGGCACCGCTGCCA
GGAGAGATTCCTGGTTTCACGTGATGAAGACGAAACTTCTAAACTCGAGG
TAGTGCAGTTTCAAGGAAATTTAGAAAGGAATAAGGTTTGGTTTCTCATT
TTAACATTTTGAGAGTTCTTTTAGCACTGTTGTAAGTAGGCATTCAAACC
TGGAGTAGATGTTTTCTTCTTTGGGCAGTTGGCTCAAATTGTGCTTGTAA
CAATAACAATTAACCCTGTTGTTGCATGATGGGATTATTGTTACATTCAT
ATGAACATCCAGGCCATTTTTTGTCTGCTCGTAATCTATTCTTTGTTTTA
TTCTGTCAAAAAAAAAAAAAAAAA
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