CX299040
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299040 vs. ExPASy Swiss-Prot
Match: PHYD1_BOVIN (Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Bos taurus GN=PHYHD1 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 2.406e-40 Identity = 84/169 (49.70%), Postives = 108/169 (63.91%), Query Frame = 2 Query: 170 GYVVLESFASDEEIEAMRKQMDHLLDGFD----CSTSSVFSTTNQQKV----TDDYFYESAEKISFFFEEKAFGDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPHQDNSFLITEP-STCTGLWLALEDATI 649 G++VLE F S +E EAM++++D ++ D C T FST ++++ + DYF S +KI FFFE+ F GN P E SINK+GHALH LDP+F+ + S K L SLG + PV +QSMYIFKQP GGEV PHQD SFL TEP GLW+ALEDA + Sbjct: 16 GFLVLEGFLSADECEAMQRRIDEIVAKMDVPLHCRTE--FSTQEEEQLRAQGSTDYFLSSGDKIRFFFEKGVFDKQGNFLVPPEKSINKIGHALHALDPIFRCVTHSHKVQALARSLGLQMPVVVQSMYIFKQPHFGGEVAPHQDASFLYTEPLGRVLGLWIALEDAML 182 HSP 2 Score: 28.8758 bits (63), Expect = 2.406e-40 Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 652 NGCLWAIPGSH 684 NGCLW IPGSH Sbjct: 184 NGCLWFIPGSH 194
BLAST of CX299040 vs. ExPASy Swiss-Prot
Match: PHYD1_DANRE (Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Danio rerio GN=phyhd1 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.534e-39 Identity = 80/168 (47.62%), Postives = 107/168 (63.69%), Query Frame = 2 Query: 167 QGYVVLESFASDEEIEAMRKQMDHLLDGFD----CSTSSVFSTTNQQKVTD----DYFYESAEKISFFFEEKAFGDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPHQDNSFLITEP-STCTGLWLALEDA 643 +GY+VLE S EE +A+R++M +++ D C T FST + +++ DYF S +KI FFFE+ F D G PKE S+NK+GHALH +P+FK+ + S K N+ L PV +QSMYIFKQPGIGGEV PHQD +FL T+P G+W+ALEDA Sbjct: 15 EGYLVLEGLLSPEECDALRRRMSEIIESMDVPEHCRTQ--FSTDHDEQLKTQGNADYFITSGDKIRFFFEKGVFDDKGEFVVPKEQSLNKIGHALHAYEPLFKRVTHSPKVQNICKKLELINPVILQSMYIFKQPGIGGEVTPHQDATFLYTQPLGRVMGVWVALEDA 180 HSP 2 Score: 28.8758 bits (63), Expect = 1.534e-39 Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 652 NGCLWAIPGSH 684 NGCLW IPGSH Sbjct: 184 NGCLWFIPGSH 194
BLAST of CX299040 vs. ExPASy Swiss-Prot
Match: PHYD1_HUMAN (Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Homo sapiens GN=PHYHD1 PE=1 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 5.757e-39 Identity = 83/169 (49.11%), Postives = 107/169 (63.31%), Query Frame = 2 Query: 170 GYVVLESFASDEEIEAMRKQMDHLLDGFD----CSTSSVFSTTNQQKV----TDDYFYESAEKISFFFEEKAFGDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPHQDNSFLITEP-STCTGLWLALEDATI 649 G++VLE F S EE AM++++ ++ D C T FST ++++ + DYF S +KI FFFE+ F + GN P E SINK+GHALH DPVFK + S K L SLG + PV +QSMYIFKQP GGEV PHQD SFL TEP G+W+A+EDAT+ Sbjct: 16 GFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTE--FSTQEEEQLRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHSFKVQTLARSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDATL 182 HSP 2 Score: 28.8758 bits (63), Expect = 5.757e-39 Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 652 NGCLWAIPGSH 684 NGCLW IPGSH Sbjct: 184 NGCLWFIPGSH 194
BLAST of CX299040 vs. ExPASy Swiss-Prot
Match: PHYD1_MOUSE (Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Mus musculus GN=Phyhd1 PE=2 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 1.142e-36 Identity = 78/169 (46.15%), Postives = 105/169 (62.13%), Query Frame = 2 Query: 170 GYVVLESFASDEEIEAMRKQMDHLLDGFD----CSTSSVFSTTNQQKVTD----DYFYESAEKISFFFEEKAFGDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPHQDNSFLITEP-STCTGLWLALEDATI 649 G+++LE F + +E AM++++ ++ D C T FST +++ DYF S +KI FFFE+ F + GN P E SINK+GHALH DPVF+ + S K L+ SLG + PV +QSMYIFKQP GGEV PHQD +FL TEP GLW+A+EDA + Sbjct: 16 GFLLLEGFFTADECVAMQQRIGEIVAEMDVPLHCRTE--FSTQEDEQLQTQGKTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFRSITHSPKVQALVRSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDATFLYTEPLGRVLGLWIAMEDAML 182 HSP 2 Score: 28.8758 bits (63), Expect = 1.142e-36 Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 652 NGCLWAIPGSH 684 NGCLW IPGSH Sbjct: 184 NGCLWFIPGSH 194
BLAST of CX299040 vs. ExPASy Swiss-Prot
Match: PHYD1_CAEEL (Phytanoyl-CoA dioxygenase domain-containing protein 1 homolog OS=Caenorhabditis elegans GN=Y105C5B.9 PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.487e-36 Identity = 72/164 (43.90%), Postives = 109/164 (66.46%), Query Frame = 2 Query: 170 GYVVLESFASDEEIEAMRKQMDHLLDGFDCST--SSVFSTTNQQK-VTDDYFYESAEKISFFFEEKAFGDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPHQDNSFLITEP-STCTGLWLALEDATI 649 G+VV+E+ +D+EI+ M+K + +++ D + SVFST ++ K D YF S++KI FFFEE A DG L PK+ ++NK+GH LH LDP F+K + + K N+ +GY+ P +QSMYIFKQP IGG V H D++FL +P TG+W+A+++A++ Sbjct: 12 GFVVVENVFNDQEIDEMKKSISKIVNDMDLAEHPKSVFSTYDEDKHAADSYFLNSSDKIRFFFEEGAVDKDGELTVPKDKALNKIGHGLHFLDPTFEKMTFNSKIQNIFKEIGYQEPGVVQSMYIFKQPKIGGAVTDHVDSTFLRVDPIDHLTGVWIAIDEASV 175 HSP 2 Score: 25.409 bits (54), Expect = 1.487e-36 Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 652 NGCLWAIPGSHK 687 NGCL IPGSHK Sbjct: 177 NGCLSFIPGSHK 188
BLAST of CX299040 vs. ExPASy Swiss-Prot
Match: PHYD1_RAT (Phytanoyl-CoA dioxygenase domain-containing protein 1 OS=Rattus norvegicus GN=Phyhd1 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 9.465e-36 Identity = 77/169 (45.56%), Postives = 103/169 (60.95%), Query Frame = 2 Query: 170 GYVVLESFASDEEIEAMRKQMDHLLDGFD----CSTSSVFSTTNQQKV----TDDYFYESAEKISFFFEEKAFGDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPHQDNSFLITEP-STCTGLWLALEDATI 649 G+++LE F + +E M++++ ++ D C T FST +++ DYF S +KI FFFE+ F + GN P E SINK+GHALH DPVF+ + S K L+ SLG + PV +QSMYIFKQP GGEV PHQD +FL TEP GLW+A EDA + Sbjct: 16 GFLLLEGFFTADECVVMQQRIGEIVAEMDVPLHCRTE--FSTQEDEQLQTQGNTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFRSITHSPKVQALVRSLGLQIPVVVQSMYIFKQPHFGGEVSPHQDATFLYTEPLGRVLGLWIATEDAML 182 HSP 2 Score: 28.8758 bits (63), Expect = 9.465e-36 Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 652 NGCLWAIPGSH 684 NGCLW IPGSH Sbjct: 184 NGCLWFIPGSH 194
BLAST of CX299040 vs. ExPASy Swiss-Prot
Match: PHYD1_DICDI (Phytanoyl-CoA dioxygenase domain-containing protein 1 homolog OS=Dictyostelium discoideum GN=phyhd1 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.607e-35 Identity = 74/161 (45.96%), Postives = 109/161 (67.70%), Query Frame = 2 Query: 170 GYVVLESFASDEEIEAMRKQMDHLLDGFDC-STSSVFSTTNQQKVTDDYFYESAEKISFFFEEKAFGDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPHQDNSFLITEPSTCTGLWLALEDATI 649 G++++ +F + EEI+ +R +M L+D D ST S+F+T+ Q++ DDYF S +KI +FFE+ + +DG L PK+++ NKVGHALH+L+P F++FS S+K +L++SLG MYIFK IGGEV HQD++FL T P T +W A ED+TI Sbjct: 15 GFLIIRNFNTTEEIDIVRGEMKKLIDELDTPSTISIFTTSEQERKVDDYFLGSGDKIRYFFEKGSI-EDGKLIVPKDMAFNKVGHALHDLNPKFEEFSYSQKIHDLIYSLGIYNKALSGIMYIFKNQKIGGEVDIHQDSTFLHTTPLTTHAIWFAFEDSTI 174 HSP 2 Score: 23.483 bits (49), Expect = 1.607e-35 Identity = 8/11 (72.73%), Postives = 9/11 (81.82%), Query Frame = 1 Query: 652 NGCLWAIPGSH 684 NGCL +PGSH Sbjct: 176 NGCLRGLPGSH 186
BLAST of CX299040 vs. ExPASy Swiss-Prot
Match: PHYD1_CAEBR (Phytanoyl-CoA dioxygenase domain-containing protein 1 homolog OS=Caenorhabditis briggsae GN=CBG00325 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 7.845e-35 Identity = 70/164 (42.68%), Postives = 106/164 (64.63%), Query Frame = 2 Query: 170 GYVVLESFASDEEIEAMRKQMDHLLDGFDCST--SSVFSTTNQQK-VTDDYFYESAEKISFFFEEKAFGDDGNLKQPKELSINKVGHALHELDPVFKKFSRSEKTSNLLHSLGYKRPVDIQSMYIFKQPGIGGEVVPHQDNSFLITEP-STCTGLWLALEDATI 649 G+VV+E+ +D+EIE ++ + +++ + + SVFST ++ K D YF S++KI FFFEE A DG L PK+ ++NK+GH LH LDP FKK + + K + +GY+ P +QSMYIFKQP IGG V H D++FL P TG+W+A+++A++ Sbjct: 12 GFVVIENVFNDQEIEEIKGAIGKIVEDMNLAEHPKSVFSTYDEDKHAADSYFLNSSDKIRFFFEEGAVDKDGELTVPKDKALNKIGHGLHLLDPTFKKMTFNSKIQKIFQGIGYQEPEVVQSMYIFKQPKIGGAVTDHVDSTFLRVNPIDHLTGVWIAIDEASV 175 HSP 2 Score: 25.409 bits (54), Expect = 7.845e-35 Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 1 Query: 652 NGCLWAIPGSHK 687 NGCL IPGSHK Sbjct: 177 NGCLSFIPGSHK 188 The following BLAST results are available for this feature:
BLAST of CX299040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299040 ID=CX299040; Name=CX299040; organism=Citrus clementina; type=EST; length=695bpback to top |