CX299255
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299255 vs. ExPASy Swiss-Prot
Match: NDHM_POPJC (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Populus jackii GN=ndhM PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.329e-21 Identity = 47/53 (88.68%), Postives = 52/53 (98.11%), Query Frame = -2 Query: 177 QGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRIMFNNN 335 +GA LTEYTLRLIGSD+EHYIRKLLYDGEIKYNM+ARVLNFSMGKPRI+FNN+ Sbjct: 145 EGAPLTEYTLRLIGSDIEHYIRKLLYDGEIKYNMNARVLNFSMGKPRILFNND 197
BLAST of CX299255 vs. ExPASy Swiss-Prot
Match: NDHM_VITVI (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Vitis vinifera GN=ndhM PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.645e-20 Identity = 46/52 (88.46%), Postives = 51/52 (98.08%), Query Frame = -2 Query: 180 QGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRIMFNN 335 +GA LTEYTLRLIGSD+EHYIRKLLYDGEIKYNM+ARVLNFSMGKPRI+FN+ Sbjct: 150 EGAPLTEYTLRLIGSDIEHYIRKLLYDGEIKYNMNARVLNFSMGKPRILFND 201
BLAST of CX299255 vs. ExPASy Swiss-Prot
Match: NDHM_ORYSJ (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. japonica GN=ndhM PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.696e-20 Identity = 45/56 (80.36%), Postives = 53/56 (94.64%), Query Frame = -2 Query: 168 QGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRIMFNNNELP 335 +GA L+EYTLRLIGSDLEH+IRKLLYDGEIKYNM +RVLNFSMGKPRI FN++++P Sbjct: 162 EGAELSEYTLRLIGSDLEHFIRKLLYDGEIKYNMMSRVLNFSMGKPRIKFNSSQIP 217
BLAST of CX299255 vs. ExPASy Swiss-Prot
Match: NDHM_ORYSI (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. indica GN=ndhM PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.696e-20 Identity = 45/56 (80.36%), Postives = 53/56 (94.64%), Query Frame = -2 Query: 168 QGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRIMFNNNELP 335 +GA L+EYTLRLIGSDLEH+IRKLLYDGEIKYNM +RVLNFSMGKPRI FN++++P Sbjct: 162 EGAELSEYTLRLIGSDLEHFIRKLLYDGEIKYNMMSRVLNFSMGKPRIKFNSSQIP 217
BLAST of CX299255 vs. ExPASy Swiss-Prot
Match: NDHM_ARATH (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Arabidopsis thaliana GN=ndhM PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.714e-19 Identity = 43/55 (78.18%), Postives = 51/55 (92.73%), Query Frame = -2 Query: 171 QGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRIMFNNNEL 335 +GA LTEYTLRLIGSD+EHYIRK+L+DGEI+YNMDARVLNFSMGKPR+ FN + + Sbjct: 151 EGAPLTEYTLRLIGSDVEHYIRKMLFDGEIQYNMDARVLNFSMGKPRVQFNTSNI 205
BLAST of CX299255 vs. ExPASy Swiss-Prot
Match: NDHM_PHYPA (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Physcomitrella patens GN=ndhM PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.952e-16 Identity = 41/47 (87.23%), Postives = 43/47 (91.49%), Query Frame = -2 Query: 192 GALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRI 332 GA LTEYTLRLIGSDLEHYIRKLL GE+KYN+D RVLNFSMGKPRI Sbjct: 146 GADLTEYTLRLIGSDLEHYIRKLLLAGELKYNLDCRVLNFSMGKPRI 192
BLAST of CX299255 vs. ExPASy Swiss-Prot
Match: NDHM_GLOVI (NAD(P)H-quinone oxidoreductase subunit M OS=Gloeobacter violaceus GN=ndhM PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.718e-11 Identity = 32/47 (68.09%), Postives = 39/47 (82.98%), Query Frame = -2 Query: 192 GALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRI 332 G LTEY LR IGSDLE++IR LL GEI YN+D+RVLNFSMG+P++ Sbjct: 61 GLALTEYNLRRIGSDLENFIRGLLQQGEIAYNLDSRVLNFSMGRPQV 107
BLAST of CX299255 vs. ExPASy Swiss-Prot
Match: NDHM_NOSP7 (NAD(P)H-quinone oxidoreductase subunit M OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ndhM PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.530e-11 Identity = 30/54 (55.56%), Postives = 41/54 (75.93%), Query Frame = -2 Query: 171 GALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRIMFNNNEL 332 GA LT+Y LR +GSDLEHY+R LL GEI YN+ ARV N+SMG P++ ++ ++ Sbjct: 67 GADLTDYNLRRVGSDLEHYLRSLLQLGEISYNLSARVTNYSMGVPQVAIDDKQV 120 The following BLAST results are available for this feature:
BLAST of CX299255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299255 ID=CX299255; Name=CX299255; organism=Citrus clementina; type=EST; length=612bpback to top |