CX299256

Overview
NameCX299256
Unique NameCX299256
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX299256 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.544e-63
Identity = 120/227 (52.86%), Postives = 162/227 (71.37%), Query Frame = 2
Query:    2 VLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRRSQRCLEMCQVNQ 682
            +LVYEYI +G L   +HD              +++WE R+R+A E+AGA+ YMHS+AS PIFHRDIK++NILLD+K+ AKVSDFG SRS+  D+THLTT + GTFGY+DPEYF SSQ+T KSDVYSFGVVL+EL+TG+KP+   R EE R L   F+   KEN++++I+D R+  E++ E + A+A+LA +CL    K RP MK+VS ELE +R S   L++   N+
Sbjct:  499 ILVYEYIPNGDLFKRLHDESDDY---------TMTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSVTLDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPLSRVRSEEGRGLATHFLEAMKENRVIDIIDIRIKDESKLEQVMAVAKLARKCLNRKGKNRPNMKEVSNELERIRSSPEDLDVRTENE 716          
BLAST of CX299256 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.339e-63
Identity = 119/222 (53.60%), Postives = 164/222 (73.87%), Query Frame = 2
Query:    2 VLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRRSQRCLEM 667
            +LVYE+I +G L   +H               +++W+ R+R++ E+AGA+AY+HS+AS P++HRD+K++NILLD+K+ AKVSDFG SRSI  D+THLTT + GTFGYLDPEYFQ+SQFTDKSDVYSFGVVL+EL+TG+KP    R EE R LV+ F    K+N++L+I+D+R+ +    E + A+A+LA RCL L  KKRP M++VS+ELE +R S   LE+
Sbjct:  491 ILVYEHIPNGDLFKRLHHDSDDY---------TMTWDVRLRISVEIAGALAYLHSAASTPVYHRDVKTTNILLDEKYRAKVSDFGTSRSINVDQTHLTTLVAGTFGYLDPEYFQTSQFTDKSDVYSFGVVLVELITGEKPFSVMRPEENRGLVSHFNEAMKQNRVLDIVDSRIKEGCTLEQVLAVAKLARRCLSLKGKKRPNMREVSVELERIRSSPEDLEL 703          
BLAST of CX299256 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 239.195 bits (609), Expect = 1.649e-62
Identity = 116/221 (52.49%), Postives = 161/221 (72.85%), Query Frame = 2
Query:    2 VLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRRSQRCLE 664
            +LVYEYI +G +   +HD              +++WE R+R+A E+AGA+ YMHS+AS PI+HRDIK++NILLD+K+ AKVSDFG SRS+  D+THLTT + GTFGY+DPEYF SSQ+TDKSDVYSFGVVL+EL+TG+KP+   R EE R L   F+   KEN++++I+D R+ +E++ + + A+A+LA +CL     KRP M++ S+ELE +R S   LE
Sbjct:  502 ILVYEYIPNGDMFKRLHDESDDY---------AMTWEVRLRIAIEIAGALTYMHSAASFPIYHRDIKTTNILLDEKYGAKVSDFGTSRSVTIDQTHLTTMVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPLSRIRSEEGRGLATHFLEAMKENRVIDIIDIRIKEESKLDQLMAVAKLARKCLSRKGIKRPNMREASLELERIRSSPEDLE 713          
BLAST of CX299256 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.798e-62
Identity = 115/214 (53.74%), Postives = 154/214 (71.96%), Query Frame = 2
Query:    2 VLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLR 643
            VLVYE+I +G L  H+HD                +W  R+R+A ++AGA++Y+HSSAS PI+HRD+KS+NI+LD+K+ AKVSDFG SR++  D THLTT + GT GY+DPEYFQSSQFTDKSDVYSFGVVL+EL+TG+K I F R +E R L   FI   KEN+L +I+DAR+        + A A++A +CL L  +KRP+M++VSMEL+ +R
Sbjct:  517 VLVYEFIPNGNLFEHLHDEFDENIMA--------TWNIRLRIAIDIAGALSYLHSSASSPIYHRDVKSTNIMLDEKYRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLVELITGEKSISFLRSQENRTLATYFILAMKENKLFDIIDARIRDGCMLSQVTATAKVARKCLNLKGRKRPSMREVSMELDSIR 722          
BLAST of CX299256 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.396e-61
Identity = 116/216 (53.70%), Postives = 157/216 (72.69%), Query Frame = 2
Query:    2 VLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRRS 649
            VLVYE++ +G L   +HD              +++WE R+ +A E+AGA++Y+HS+AS PI+HRDIK++NILLD++  AKVSDFG SRS+  D+THLTT + GTFGY+DPEYFQSS+FT+KSDVYSFGVVL+ELLTG+KP    R EE R L A F+   KEN++L+I+D R+  E   + + ++A LA RCL    KKRP M++VS+ELE +R S
Sbjct:  486 VLVYEFVPNGDLCKRLHDESDDY---------TMTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDERNRAKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTEKSDVYSFGVVLVELLTGEKPSSRVRSEENRGLAAHFVEAVKENRVLDIVDDRIKDECNMDQVMSVANLARRCLNRKGKKRPNMREVSIELEMIRSS 692          
BLAST of CX299256 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.110e-61
Identity = 114/214 (53.27%), Postives = 154/214 (71.96%), Query Frame = 2
Query:    2 VLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLR 643
            +LVYE+I +G L  H+HD             +  +WE R+R+A ++AGA++Y+HS+AS PI+HRDIKS+NI+LD+K  AKVSDFG SR++  D THLTT + GT GY+DPEYFQSSQFTDKSDVYSFGVVL EL+TG+K + F R +E R L   F    KEN+L +I+DAR+    +   + A A++A +CL +  +KRP+M+QVSMELE +R
Sbjct:  503 ILVYEFIPNGNLFEHLHDDSDDY--------TMTTWEVRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNIMLDEKHRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLAELITGEKSVSFLRSQEYRTLATYFTLAMKENRLSDIIDARIRDGCKLNQVTAAAKIARKCLNMKGRKRPSMRQVSMELEKIR 708          
BLAST of CX299256 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 233.802 bits (595), Expect = 6.928e-61
Identity = 114/216 (52.78%), Postives = 154/216 (71.30%), Query Frame = 2
Query:    2 VLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRRS 649
            VLVYE++ +G L   + D               ++WE R+ +A E+AGA++Y+HS+AS PI+HRDIK++NILLD+K+  KVSDFG SRS+  D+THLTT + GTFGY+DPEYFQSS+FTDKSDVYSFGVVL+EL+TGK P    + EE R   A F++  KEN+ L+I+D R+  E   + + A+A+LA RCL    KKRP M++VS+ELE +R S
Sbjct:  494 VLVYEFVPNGDLCKRLRDECDDYI---------MTWEVRLHIAIEIAGALSYLHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITGKNPSSRVQSEENRGFAAHFVAAVKENRFLDIVDERIKDECNLDQVMAVAKLAKRCLNRKGKKRPNMREVSVELERIRSS 700          
BLAST of CX299256 vs. ExPASy Swiss-Prot
Match: WAKLC_ARATH (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2)

HSP 1 Score: 233.802 bits (595), Expect = 6.928e-61
Identity = 118/235 (50.21%), Postives = 165/235 (70.21%), Query Frame = 2
Query:    2 VLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLRRSQRCLEMCQVNQLLADEISL 706
            +LVYEYI +G L   +HD               ++WE R+R+A E+AGA++YMHS+AS PIFHRDIK++NILLD+K+ AK+SDFG SRS+  D+THLTT + GTFGY+DPEYF SSQ+T KSDVYSFGVVL+EL+TG+KP+   R EE   L   F+   KEN+ ++I+D R+  E+++  + A+A+LA RCL     KRP M++VS++LE +R S + L++   N+   +E  L
Sbjct:  498 ILVYEYIPNGDLFKRLHDEYDDYM---------MTWEVRLRIAVEIAGALSYMHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSVATDQTHLTTLVAGTFGYMDPEYFLSSQYTHKSDVYSFGVVLVELITGEKPMSRVRSEEGIGLATYFLEAMKENRAVDIIDIRIKDESKQ--VMAVAKLARRCLNRKGNKRPNMREVSIKLERIRSSPKDLDVHTENEEEEEEDQL 721          
BLAST of CX299256 vs. ExPASy Swiss-Prot
Match: WAK2_ARATH (Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.438e-60
Identity = 116/214 (54.21%), Postives = 151/214 (70.56%), Query Frame = 2
Query:    2 VLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLR 643
            +LVYE+I+SGTL  H+H              SSL+WE+R+R+A EVAG++AY+HSSASIPI HRDIK++NILLD   +AKV+DFG SR IP DK  LTT +QGT GYLDPEY+ +    +KSDVYSFGVVL+ELL+G+K +CF R    +NLV+CF S  K N+  EI+D +V  E  + +I   A +A  C RL  ++RP MK+V+ ELE LR
Sbjct:  474 LLVYEFINSGTLFDHLHGSLYD---------SSLTWEHRLRIATEVAGSLAYLHSSASIPIIHRDIKTANILLDKNLTAKVADFGASRLIPMDKEQLTTIVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPHCPKNLVSCFASATKNNRFHEIIDGQVMNEDNQREIQEAARIAAECTRLMGEERPRMKEVAAELEALR 678          
BLAST of CX299256 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.490e-60
Identity = 113/214 (52.80%), Postives = 155/214 (72.43%), Query Frame = 2
Query:    2 VLVYEYISSGTLSHHIHDHXXXXXXXXXXXLSSLSWENRVRVACEVAGAVAYMHSSASIPIFHRDIKSSNILLDDKFSAKVSDFGISRSIPNDKTHLTTTIQGTFGYLDPEYFQSSQFTDKSDVYSFGVVLLELLTGKKPICFARVEEERNLVACFISLAKENQLLEILDARVAKEAREEDIGAMAELAMRCLRLNSKKRPTMKQVSMELEGLR 643
            +LVYE+ISSGTL  H+H              SSL+WE+R+R+A EVAG +AY+HS ASIPI HRD+K++NILLD+  +AKV+DFG SR IP D+  LTT +QGT GYLDPEY+ +    +KSDVYSFGVVL+ELL+G+K +CF R +  ++LV+ F+S  KEN+L EI+D +V  E  + +I   A +A+ C R+  ++RP+MK+V+ ELE LR
Sbjct:  478 LLVYEFISSGTLFDHLHGSMFD---------SSLTWEHRLRIAIEVAGTLAYLHSYASIPIIHRDVKTANILLDENLTAKVADFGASRLIPMDQEQLTTMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGEKALCFERPQSSKHLVSYFVSAMKENRLHEIIDGQVMNEYNQREIQESARIAVECTRIMGEERPSMKEVAAELEALR 682          
The following BLAST results are available for this feature:
BLAST of CX299256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 437
Match NameE-valueIdentityDescription
WAKLA_ARATH2.544e-6352.86Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
WAKLI_ARATH4.339e-6353.60Wall-associated receptor kinase-like 22 OS=Arabido... [more]
WAKLE_ARATH1.649e-6252.49Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
WAKLH_ARATH4.798e-6253.74Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
WAKLB_ARATH1.396e-6153.70Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
WAKLJ_ARATH3.110e-6153.27Wall-associated receptor kinase-like 10 OS=Arabido... [more]
WAKLD_ARATH6.928e-6152.78Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
WAKLC_ARATH6.928e-6150.21Wall-associated receptor kinase-like 3 OS=Arabidop... [more]
WAK2_ARATH3.438e-6054.21Wall-associated receptor kinase 2 OS=Arabidopsis t... [more]
WAK5_ARATH4.490e-6052.80Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionC06020E09SK RindPdig24 Citrus clementina cDNA clone C06020E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299256 ID=CX299256; Name=CX299256; organism=Citrus clementina; type=EST; length=706bp
GGTACTAGTATACGAGTACATCTCCAGTGGAACACTTTCCCACCACATTC
ATGATCACCAGCAACAGCAAGAACAGAAACAAAAACAAGAATTGTCTTCA
CTTTCATGGGAGAATCGAGTTAGGGTTGCGTGTGAAGTTGCAGGAGCAGT
AGCATATATGCATTCCTCAGCCTCTATCCCTATCTTTCATCGCGACATCA
AATCTTCCAACATACTCTTGGATGATAAATTTAGCGCAAAAGTTTCTGAT
TTTGGTATTTCAAGGTCTATACCGAACGATAAGACTCATTTAACAACAAC
AATTCAAGGAACCTTCGGATACTTGGATCCAGAGTATTTTCAATCAAGTC
AATTCACAGATAAAAGCGATGTGTATAGCTTTGGGGTTGTTCTATTAGAG
CTTCTAACCGGTAAGAAACCAATCTGTTTTGCTAGAGTAGAAGAAGAAAG
AAATTTAGTTGCATGCTTCATTTCATTAGCAAAGGAGAACCAACTGCTTG
AGATTTTAGATGCTAGAGTAGCTAAAGAAGCAAGAGAAGAAGATATTGGA
GCTATGGCAGAGCTTGCAATGAGATGTTTGAGATTGAATAGCAAAAAAAG
ACCGACGATGAAACAAGTTTCAATGGAGCTTGAAGGGTTGAGAAGATCAC
AGAGATGCTTAGAAATGTGCCAAGTGAATCAGTTGTTGGCAGATGAGATT
TCATTA
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