CX299261

Overview
NameCX299261
Unique NameCX299261
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length742
Libraries
Library NameType
RindPdig24cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX299261 vs. ExPASy Swiss-Prot
Match: SAHH1_ARATH (Adenosylhomocysteinase 1 OS=Arabidopsis thaliana GN=SAHH1 PE=1 SV=1)

HSP 1 Score: 417.542 bits (1072), Expect = 3.672e-116
Identity = 209/241 (86.72%), Postives = 226/241 (93.78%), Query Frame = 1 
Query:    7 QAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGV*RITISPN**VGL-PRDHSGIIVLAE 726
            +AEEI+EKTG++PDP STDN EFQIVL+II++GL+ DPKKYHKMKERLVGVSEETTTGVKRLYQMQ+NGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAV+CGYGDVGKGCAAA+K AGARVIVTEIDPICALQALMEGLQVLTLEDV+S+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEID+LGLETYPGV RITI P     + P   +GIIVLAE
Sbjct:  152 KAEEIFEKTGQVPDPTSTDNPEFQIVLSIIKEGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETKAGIIVLAE 392
[Close]
BLAST of CX299261 vs. ExPASy Swiss-Prot
Match: SAHH_CATRO (Adenosylhomocysteinase OS=Catharanthus roseus GN=SAHH PE=2 SV=1)

HSP 1 Score: 412.535 bits (1059), Expect = 1.181e-114
Identity = 212/241 (87.97%), Postives = 223/241 (92.53%), Query Frame = 1 
Query:    7 QAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGV*RITISPN**VGL-PRDHSGIIVLAE 726
            +AEE Y+K G LPDP+STDNAEFQIVLTIIRDGLK+DP KY +MKERLVGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVV GYGDVGKGCAAALKQAGARVIVTEIDPICALQA MEGLQVLTLEDV+S+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEID+LGLETYPGV RITI P     + P  +SGIIVLAE
Sbjct:  152 KAEEEYKKNGALPDPSSTDNAEFQIVLTIIRDGLKSDPTKYTRMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAE 392
[Close]
BLAST of CX299261 vs. ExPASy Swiss-Prot
Match: SAHH_LUPLU (Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH PE=2 SV=1)

HSP 1 Score: 410.223 bits (1053), Expect = 5.863e-114
Identity = 206/241 (85.48%), Postives = 225/241 (93.36%), Query Frame = 1 
Query:    7 QAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGV*RITISPN**VGL-PRDHSGIIVLAE 726
            +AEEIYEK+G+ PDP STDNAEF+IVL+II++GLK DPK+YHKMK+R+VGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVV GYGDVGKGCAAALKQAGARVIVTEIDPICALQA MEGLQVLTLEDV+S+ADIFVTTTGNKDIIM+DHMKKMKNNAIVCNIGHFDNEID+LGLET+PGV RITI P     + P  ++GII+LAE
Sbjct:  152 KAEEIYEKSGQFPDPDSTDNAEFKIVLSIIKEGLKTDPKRYHKMKDRVVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHFDNEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIILAE 392
[Close]
BLAST of CX299261 vs. ExPASy Swiss-Prot
Match: SAHH_MEDSA (Adenosylhomocysteinase OS=Medicago sativa GN=SAHH PE=2 SV=1)

HSP 1 Score: 409.838 bits (1052), Expect = 7.657e-114
Identity = 209/241 (86.72%), Postives = 221/241 (91.70%), Query Frame = 1 
Query:    7 QAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGV*RITISPN**VGL-PRDHSGIIVLAE 726
            +AEE++EKTG+LPDP+STDNAE QIVLTIIRDGLK DPK+Y KMK R+VGVSEETTTGVKRLYQMQ +GTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQ GARVIVTEIDPICALQALMEGLQVLTLEDV+S+ADIFVTTTGNKDIIMV  MKKMKNNAIVCNIGHFDNEID+ GLETYPGV RITI P     + P   SGIIVLAE
Sbjct:  152 KAEEVFEKTGQLPDPSSTDNAEMQIVLTIIRDGLKTDPKRYQKMKTRIVGVSEETTTGVKRLYQMQASGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQGGARVIVTEIDPICALQALMEGLQVLTLEDVISEADIFVTTTGNKDIIMVSDMKKMKNNAIVCNIGHFDNEIDMHGLETYPGVKRITIKPQTDRWVFPETKSGIIVLAE 392
[Close]
BLAST of CX299261 vs. ExPASy Swiss-Prot
Match: SAHH2_ARATH (Adenosylhomocysteinase 2 OS=Arabidopsis thaliana GN=SAHH2 PE=1 SV=1)

HSP 1 Score: 409.838 bits (1052), Expect = 7.657e-114
Identity = 207/241 (85.89%), Postives = 220/241 (91.29%), Query Frame = 1 
Query:    7 QAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGV*RITISPN**VGL-PRDHSGIIVLAE 726
            +AEEI+ K G  PDP STDN EFQIVL+II+DGL+ DPKKYHKMKERLVGVSEETTTGVKRLYQMQE G LLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAV+CGYGDVGKGCAAA+K AGARVIVTEIDPICALQALMEGLQVLTLEDV+S+ADIF TTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEID+LGLETYPGV RITI P     + P  +SGIIVLAE
Sbjct:  152 KAEEIFAKNGTFPDPTSTDNPEFQIVLSIIKDGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQETGALLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQALMEGLQVLTLEDVVSEADIFCTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAE 392
[Close]
BLAST of CX299261 vs. ExPASy Swiss-Prot
Match: SAHH_WHEAT (Adenosylhomocysteinase OS=Triticum aestivum GN=SAHH PE=2 SV=1)

HSP 1 Score: 409.453 bits (1051), Expect = 1.000e-113
Identity = 208/241 (86.31%), Postives = 222/241 (92.12%), Query Frame = 1 
Query:    7 QAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGV*RITISPN**VGL-PRDHSGIIVLAE 726
            +AEE +EK+GK+PDP STDN EF+IVLTIIRDGLK D  KY KMKERLVGVSEETTTGVKRLYQMQE+GTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEG+Q+LTLEDV+S+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEID+ GLETYPGV RITI P     + P   +GIIVLAE
Sbjct:  152 KAEEEFEKSGKVPDPESTDNPEFKIVLTIIRDGLKTDASKYRKMKERLVGVSEETTTGVKRLYQMQESGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGIQILTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMNGLETYPGVKRITIKPQTDRWVFPETKTGIIVLAE 392
[Close]
BLAST of CX299261 vs. ExPASy Swiss-Prot
Match: SAHH_TOBAC (Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAHH PE=2 SV=1)

HSP 1 Score: 401.749 bits (1031), Expect = 2.085e-111
Identity = 206/241 (85.48%), Postives = 218/241 (90.46%), Query Frame = 1 
Query:    7 QAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGV*RITISPN**VGL-PRDHSGIIVLAE 726
            +AEE + K G +PDP STDNAEFQ+VLTII++ LK DP KY KMKERLVGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVA+V GYGDVGKGCAAALKQAGARVIVTEIDPICALQA MEGLQVLTLEDV+SD DIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEID+LGLETYPGV RITI P     + P  +SGIIVLAE
Sbjct:  152 KAEEEFAKNGTIPDPNSTDNAEFQLVLTIIKESLKTDPLKYTKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVALVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSDVDIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAE 392
[Close]
BLAST of CX299261 vs. ExPASy Swiss-Prot
Match: SAHH_NICSY (Adenosylhomocysteinase OS=Nicotiana sylvestris GN=SAHH PE=2 SV=1)

HSP 1 Score: 401.749 bits (1031), Expect = 2.085e-111
Identity = 206/241 (85.48%), Postives = 218/241 (90.46%), Query Frame = 1 
Query:    7 QAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGV*RITISPN**VGL-PRDHSGIIVLAE 726
            +AEE + K G +PDP STDNAEFQ+VLTII++ LK DP KY KMKERLVGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVA+V GYGDVGKGCAAALKQAGARVIVTEIDPICALQA MEGLQVLTLEDV+SD DIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEID+LGLETYPGV RITI P     + P  +SGIIVLAE
Sbjct:  152 KAEEEFAKNGTIPDPNSTDNAEFQLVLTIIKESLKTDPLKYTKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVALVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSDVDIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAE 392
[Close]
BLAST of CX299261 vs. ExPASy Swiss-Prot
Match: SAHH_PHASS (Adenosylhomocysteinase OS=Phalaenopsis sp. GN=SAHH PE=2 SV=1)

HSP 1 Score: 401.364 bits (1030), Expect = 2.723e-111
Identity = 205/241 (85.06%), Postives = 219/241 (90.87%), Query Frame = 1 
Query:    7 QAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGV*RITISPN**VGL-PRDHSGIIVLAE 726
            +AEE YEK GK+PDPASTDNAEFQIVL +IRD L  DPKKY +MKERLVGVSEETTTGVKRLYQMQ +GTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVG GCAAALK AGARVIVTEIDPICALQALMEGL VL LEDV+S+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEID+LGLE++PGV RITI P     + P  +SGI+VLAE
Sbjct:  152 KAEEEYEKNGKIPDPASTDNAEFQIVLGLIRDSLSVDPKKYRRMKERLVGVSEETTTGVKRLYQMQYSGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGLGCAAALKTAGARVIVTEIDPICALQALMEGLPVLRLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLESFPGVKRITIKPQTDRRVFPDTNSGILVLAE 392
[Close]
BLAST of CX299261 vs. ExPASy Swiss-Prot
Match: SAHH_PETCR (Adenosylhomocysteinase OS=Petroselinum crispum GN=SAHH PE=2 SV=2)

HSP 1 Score: 401.364 bits (1030), Expect = 2.723e-111
Identity = 203/241 (84.23%), Postives = 220/241 (91.29%), Query Frame = 1 
Query:    7 QAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGV*RITISPN**VGL-PRDHSGIIVLAE 726
            +AEE Y+K+G +PDPASTDNAEFQIVL+IIRDGLK+DP KYHKMK+RLVGVSEETTTGVKRLYQMQ+NGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVA++ GYGDVGKGCAAA+KQAGARVIVTEIDPICALQA MEGLQVL LEDV+S+ DIFVTTTGNKDIIMV  M+KMKNNAIVCNIGHFDNEID+LGLETYPGV RITI P     + P    GII+LAE
Sbjct:  152 KAEEEYKKSGAIPDPASTDNAEFQIVLSIIRDGLKSDPMKYHKMKDRLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVALIAGYGDVGKGCAAAMKQAGARVIVTEIDPICALQATMEGLQVLPLEDVVSEVDIFVTTTGNKDIIMVSDMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTGRGIIILAE 392
The following BLAST results are available for this feature:
BLAST of CX299261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 244
Match NameE-valueIdentityDescription
SAHH1_ARATH3.672e-11686.72Adenosylhomocysteinase 1 OS=Arabidopsis thaliana G... [more]
SAHH_CATRO1.181e-11487.97Adenosylhomocysteinase OS=Catharanthus roseus GN=S... [more]
SAHH_LUPLU5.863e-11485.48Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH P... [more]
SAHH_MEDSA7.657e-11486.72Adenosylhomocysteinase OS=Medicago sativa GN=SAHH ... [more]
SAHH2_ARATH7.657e-11485.89Adenosylhomocysteinase 2 OS=Arabidopsis thaliana G... [more]
SAHH_WHEAT1.000e-11386.31Adenosylhomocysteinase OS=Triticum aestivum GN=SAH... [more]
SAHH_TOBAC2.085e-11185.48Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAH... [more]
SAHH_NICSY2.085e-11185.48Adenosylhomocysteinase OS=Nicotiana sylvestris GN=... [more]
SAHH_PHASS2.723e-11185.06Adenosylhomocysteinase OS=Phalaenopsis sp. GN=SAHH... [more]
SAHH_PETCR2.723e-11184.23Adenosylhomocysteinase OS=Petroselinum crispum GN=... [more]

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Properties
Property NameValue
Genbank descriptionC06020F02SK RindPdig24 Citrus clementina cDNA clone C06020F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299261 ID=CX299261; Name=CX299261; organism=Citrus clementina; type=EST; length=742bp
GAGGGTCAAGCTGAGGAGATCTACGAGAAGACCGGGAAGTTGCCCGACCC
GGCCTCCACCGACAACGCCGAGTTTCAGATTGTTTTGACTATCATTAGAG
ATGGGTTGAAGGCCGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTA
GTTGGTGTTTCCGAAGAAACCACGACCGGTGTCAAGAGATTGTATCAGAT
GCAAGAAAATGGAACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTG
TCACCAAGAGCAAGTTTGATAACTTGTATGGATGCCGCCACTCGCTCCCA
GATGGTTTGATGAGAGCTACTGATGTTATGATTGCCGGAAAGGTTGCTGT
TGTTTGCGGTTATGGTGATGTTGGCAAGGGTTGTGCTGCTGCTTTGAAGC
AAGCCGGTGCTCGTGTAATTGTTACCGAGATTGATCCAATTTGCGCTCTC
CAGGCTCTTATGGAGGGTCTTCAAGTCCTAACCCTTGAGGATGTCCTCTC
CGATGCTGACATCTTTGTTACCACCACCGGTAACAAGGACATCATCATGG
TTGACCACATGAAGAAGATGAAGAACAATGCAATTGTTTGCAACATTGGT
CACTTTGATAATGAAATTGATGTGCTCGGTCTTGAGACCTACCCGGGTGT
TTAGCGCATTACCATCAGCCCCAACTGATAGGTGGGTCTTCCCCGAGACC
ACTCAGGCATCATCGTGTTGGCTGAGGACGTCTCATGAACTG
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