CX299740
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299740 vs. ExPASy Swiss-Prot
Match: RL8_SOLLC (60S ribosomal protein L8 OS=Solanum lycopersicum GN=RPL8 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.079e-37 Identity = 69/71 (97.18%), Postives = 71/71 (100.00%), Query Frame = 3 Query: 3 QVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 215 QVAGGGRTEKP+LKAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI Sbjct: 168 QVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
BLAST of CX299740 vs. ExPASy Swiss-Prot
Match: RL83_ARATH (60S ribosomal protein L8-3 OS=Arabidopsis thaliana GN=RPL8C PE=2 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 6.049e-37 Identity = 68/71 (95.77%), Postives = 71/71 (100.00%), Query Frame = 3 Query: 3 QVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 215 QVAGGGRTEKP+LKAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPG+KVGLI Sbjct: 168 QVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGKKVGLI 238
BLAST of CX299740 vs. ExPASy Swiss-Prot
Match: RL8_TOBAC (60S ribosomal protein L8 OS=Nicotiana tabacum GN=RPL8 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.032e-36 Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 3 Query: 3 QVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 215 QVAGGGRTEKP+LKAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTV RDAPPGQKVGLI Sbjct: 168 QVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVARDAPPGQKVGLI 238
BLAST of CX299740 vs. ExPASy Swiss-Prot
Match: RL81_ARATH (60S ribosomal protein L8-1 OS=Arabidopsis thaliana GN=RPL8A PE=2 SV=2) HSP 1 Score: 150.984 bits (380), Expect = 3.002e-36 Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 3 Query: 3 QVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 215 QVAGGGRTEKP+LKAGNAYHK+RVKRN WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI Sbjct: 168 QVAGGGRTEKPMLKAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 238
BLAST of CX299740 vs. ExPASy Swiss-Prot
Match: RL82_ARATH (60S ribosomal protein L8-2 OS=Arabidopsis thaliana GN=RPL8B PE=2 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 9.994e-32 Identity = 61/71 (85.92%), Postives = 63/71 (88.73%), Query Frame = 3 Query: 3 QVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 215 QVAGGGRTEKP LKAGNAYHK++ KRNCWP VRGVAMNPVEHPHGGGNHQHIGHASTVRRD G KVG I Sbjct: 169 QVAGGGRTEKPFLKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAGAKVGQI 239
BLAST of CX299740 vs. ExPASy Swiss-Prot
Match: RL8_ANOGA (60S ribosomal protein L8 OS=Anopheles gambiae GN=RpL8 PE=2 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 1.305e-31 Identity = 59/70 (84.29%), Postives = 65/70 (92.86%), Query Frame = 3 Query: 6 VAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 215 VAGGGR +KP+LKAG AYHK++VKRNCWPKVRGVAMNPVEHPHGGGNHQHIG ASTV+R PPG+KVGLI Sbjct: 169 VAGGGRIDKPILKAGRAYHKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTPPGRKVGLI 238
BLAST of CX299740 vs. ExPASy Swiss-Prot
Match: RL8_AEDAL (60S ribosomal protein L8 OS=Aedes albopictus GN=RpL8 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.105e-30 Identity = 58/70 (82.86%), Postives = 64/70 (91.43%), Query Frame = 3 Query: 6 VAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 215 VAGGGR +KP+LKAG AY K++VKRNCWPKVRGVAMNPVEHPHGGGNHQHIG ASTV+R PPG+KVGLI Sbjct: 169 VAGGGRIDKPILKAGRAYRKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTPPGRKVGLI 238
BLAST of CX299740 vs. ExPASy Swiss-Prot
Match: RL8_CAEEL (60S ribosomal protein L8 OS=Caenorhabditis elegans GN=rpl-8 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.885e-30 Identity = 58/70 (82.86%), Postives = 64/70 (91.43%), Query Frame = 3 Query: 6 VAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 215 VAGGGRT+KPLLKAG +YHK++ KRN WP+VRGVAMNPVEHPHGGGNHQHIGH STVRRDA G+KVGLI Sbjct: 169 VAGGGRTDKPLLKAGRSYHKYKAKRNSWPRVRGVAMNPVEHPHGGGNHQHIGHPSTVRRDASAGKKVGLI 238
BLAST of CX299740 vs. ExPASy Swiss-Prot
Match: RL2_SCHPO (60S ribosomal protein L2 OS=Schizosaccharomyces pombe GN=rpl2a PE=2 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 4.199e-30 Identity = 55/70 (78.57%), Postives = 64/70 (91.43%), Query Frame = 3 Query: 6 VAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 215 VAGGGR +KPLLKAG A+HK+RVKRNCWP+ RGVAMNPV+HPHGGGNHQH+GH++TV R + PGQKVGLI Sbjct: 168 VAGGGRIDKPLLKAGRAFHKYRVKRNCWPRTRGVAMNPVDHPHGGGNHQHVGHSTTVPRQSAPGQKVGLI 237
BLAST of CX299740 vs. ExPASy Swiss-Prot
Match: RL8_XENTR (60S ribosomal protein L8 OS=Xenopus tropicalis GN=rpl8 PE=2 SV=3) HSP 1 Score: 129.413 bits (324), Expect = 9.354e-30 Identity = 56/70 (80.00%), Postives = 63/70 (90.00%), Query Frame = 3 Query: 6 VAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 215 VAGGGR +KP+LKAG AYHK++ KRNCWP+VRGVAMNPVEHP GGGNHQHIG ST+RRDAP G+KVGLI Sbjct: 169 VAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLI 238 The following BLAST results are available for this feature:
BLAST of CX299740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299740 ID=CX299740; Name=CX299740; organism=Citrus clementina; type=EST; length=514bpback to top |