CX299746

Overview
NameCX299746
Unique NameCX299746
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length485
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3799 contig Ccv1_Contig3799:80..564. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX299746 vs. ExPASy Swiss-Prot
Match: HYES_HUMAN (Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 4.327e-31
Identity = 59/145 (40.69%), Postives = 84/145 (57.93%), Query Frame = 3
Query:   45 INMHVASIGTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPG 479
            + +H   +G+GPAV   HGFPE WYSWR Q+  L+  GYR +A D++GYG++ APP +  Y                   Q   +GHDWG ++ WY  LF P+RV+A+ +++ PF P NP + PL + +A    DY +  FQEPG
Sbjct:  248 VRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQL-YFQEPG 391          
BLAST of CX299746 vs. ExPASy Swiss-Prot
Match: HYES_PIG (Epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.392e-29
Identity = 57/146 (39.04%), Postives = 84/146 (57.53%), Query Frame = 3
Query:   42 GINMHVASIGTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPG 479
            G+ +H   +G+GPAV   HGFPE W+SWR Q+  L+  G+R +A D++GYG++ APP +  Y+                  Q   +GHDWG ++ W   LF P+RV+A+ +++ PF P NP V P+   +A    DY +  FQEPG
Sbjct:  247 GVRLHFVEMGSGPAVCLCHGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGGVLVWNMALFYPERVRAVASLNTPFMPSNPNVSPMEIIKANPVFDYQL-YFQEPG 391          
BLAST of CX299746 vs. ExPASy Swiss-Prot
Match: HYES_RAT (Epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 2.625e-28
Identity = 54/146 (36.99%), Postives = 82/146 (56.16%), Query Frame = 3
Query:   42 GINMHVASIGTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPG 479
            GI +H   +G+GPA+   HGFPE W+SWR Q+  L+  G+R +A D++GYGD+ +PP +  Y                   Q   +GHDW  ++ W   LF P+RV+A+ +++ P  P NP V P+   R++   +Y +  FQEPG
Sbjct:  245 GIRLHFVEMGSGPAICLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCEEMVTFLNKLGIPQAVFIGHDWAGVLVWNMALFHPERVRAVASLNTPLMPPNPEVSPMEVIRSIPVFNYQL-YFQEPG 389          
BLAST of CX299746 vs. ExPASy Swiss-Prot
Match: HYES_MOUSE (Epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 9.976e-28
Identity = 54/146 (36.99%), Postives = 83/146 (56.85%), Query Frame = 3
Query:   42 GINMHVASIGTGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEPG 479
            GI +H   +G+GPA+   HGFPE W+SWR Q+  L+  G+R +A D++GYGD+ +PP +  Y                   Q   +GHDW  ++ W   LF P+RV+A+ +++ PF P +P V P+   R++   +Y +  FQEPG
Sbjct:  245 GIRLHFVEMGSGPALCLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCKEMVTFLDKLGIPQAVFIGHDWAGVMVWNMALFYPERVRAVASLNTPFMPPDPDVSPMKVIRSIPVFNYQL-YFQEPG 389          
BLAST of CX299746 vs. ExPASy Swiss-Prot
Match: YFHM_BACSU (AB hydrolase superfamily protein yfhM OS=Bacillus subtilis GN=yfhM PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.032e-24
Identity = 56/151 (37.09%), Postives = 79/151 (52.32%), Query Frame = 3
Query:   30 VATNGINMHVASIGT--GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPPRNPAVRPLNNFRAVYGDDYYICRFQEP 476
            V TNGI +HVA+ G   GP ++ +HGFPE WY W+NQ+  L   GYR IAPD RGY  +D P  + SY                   +  ++GHDWG  +AW+    RP+ ++ L+ +++P P     V PL  +   +    YI  FQ P
Sbjct:    9 VNTNGITLHVAAAGREDGPLIVLLHGFPEFWYGWKNQIKPLVDAGYRVIAPDQRGYNLSDKPEGIDSYRIDTLRDDIIGLITQFTDEKAIVIGHDWGGAVAWHLASTRPEYLEKLIAINIPHPHVMKTVTPL--YPPQWLKSSYIAYFQLP 157          
BLAST of CX299746 vs. ExPASy Swiss-Prot
Match: EPHX3_HUMAN (Epoxide hydrolase 3 OS=Homo sapiens GN=EPHX3 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 2.631e-20
Identity = 49/117 (41.88%), Postives = 67/117 (57.26%), Query Frame = 3
Query:   36 TNGINMHVASIG--TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMS 380
            ++G+ +H  S G   GP +LF+HGFPE W+SWR QL    SR +  +A DLRGYG +DAP  V  YT                  +  LV HDWGAL+AW+F ++ P  V+ +V +S
Sbjct:   82 SSGLRLHYVSAGRGNGPLMLFLHGFPENWFSWRYQLREFQSR-FHVVAVDLRGYGPSDAPRDVDCYTIDLLLVDIKDVILGLGYSKCILVAHDWGALLAWHFSIYYPSLVERMVVVS 197          
BLAST of CX299746 vs. ExPASy Swiss-Prot
Match: EPHX4_MOUSE (Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.481e-19
Identity = 54/160 (33.75%), Postives = 78/160 (48.75%), Query Frame = 3
Query:   21 HTTVATNGINMHVASIGTG--PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFPP-------RNPAVRPLNNFRAVYGDDYYICRFQE 473
            +  +  +G+  H  + G    P +L +HGFPE WYSWR+QL    S  YR +A DLRGYG++DAP    SY                   +  L+GHDWG +IAW   +  P+ +  L+ ++ P P        R+PA      FR+ +   + I RF E
Sbjct:   71 YVRIKDSGLRFHYVAAGERGKPLMLLLHGFPEFWYSWRHQLREFKSE-YRVVALDLRGYGESDAPAHQESYKLDCLIADIKDILDSLGYSKCVLIGHDWGGMIAWLIAVCYPEMIMKLIVINFPHPSVFTEYILRHPA----QLFRSSFYYFFQIPRFPE 225          
BLAST of CX299746 vs. ExPASy Swiss-Prot
Match: EPHX4_HUMAN (Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 2.463e-18
Identity = 46/126 (36.51%), Postives = 64/126 (50.79%), Query Frame = 3
Query:   21 HTTVATNGINMHVASIGTG--PAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 392
            +  +  +G+  H  + G    P +L +HGFPE WYSWR QL    S  YR +A DLRGYG+TDAP    +Y                   +  L+GHDWG +IAW   +  P+ V  L+ ++ P P
Sbjct:   73 YVRIKDSGLRFHYVAAGERGKPLMLLLHGFPEFWYSWRYQLREFKSE-YRVVALDLRGYGETDAPIHRQNYKLDCLITDIKDILDSLGYSKCVLIGHDWGGMIAWLIAICYPEMVMKLIVINFPHP 197          
BLAST of CX299746 vs. ExPASy Swiss-Prot
Match: EPHX3_XENTR (Epoxide hydrolase 3 OS=Xenopus tropicalis GN=ephx3 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 4.201e-18
Identity = 48/120 (40.00%), Postives = 62/120 (51.67%), Query Frame = 3
Query:   39 NGINMHVASIGT--GPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVPFP 392
            +GI  H  + G    P +L +HGFPE WYSWR QL   S+ GYR +A DLRG+G +DAP  +  Y                   +  LVGHDWG  +AW F +   D V  L+ M+ P P
Sbjct:   83 SGIRFHYVASGDKRNPLMLLLHGFPENWYSWRYQLDEFSN-GYRTVAIDLRGFGGSDAPSRLEDYKMEILLQDLQDLIRGLGYSRCVLVGHDWGGTLAWTFAVRHRDMVTHLIVMNAPHP 201          
BLAST of CX299746 vs. ExPASy Swiss-Prot
Match: EPHX3_MOUSE (Epoxide hydrolase 3 OS=Mus musculus GN=Ephx3 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 5.487e-18
Identity = 46/121 (38.02%), Postives = 64/121 (52.89%), Query Frame = 3
Query:   30 VATNGINMHVASIG--TGPAVLFIHGFPELWYSWRNQLLYLSSRGYRAIAPDLRGYGDTDAPPSVTSYTALHXXXXXXXXXXXXXXHQVFLVGHDWGALIAWYFCLFRPDRVKALVNMSVP 386
            V ++G+ +H  S G   GP +LF+HGFPE W+SWR QL    S  +  +A D+RGY  +DAP  V  YT                  +  LV HDWGA +AW F ++ P  V+ +V  + P
Sbjct:   87 VKSSGLRLHYVSAGHGNGPLMLFLHGFPENWFSWRYQLREFQSH-FHVVAVDMRGYSPSDAPKEVDCYTIDLLLDDIKDTILGLGYSKCILVSHDWGASLAWEFSIYYPSLVERMVVANGP 206          
The following BLAST results are available for this feature:
BLAST of CX299746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
HYES_HUMAN4.327e-3140.69Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 ... [more]
HYES_PIG1.392e-2939.04Epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV... [more]
HYES_RAT2.625e-2836.99Epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 ... [more]
HYES_MOUSE9.976e-2836.99Epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 ... [more]
YFHM_BACSU1.032e-2437.09AB hydrolase superfamily protein yfhM OS=Bacillus ... [more]
EPHX3_HUMAN2.631e-2041.88Epoxide hydrolase 3 OS=Homo sapiens GN=EPHX3 PE=2 ... [more]
EPHX4_MOUSE6.481e-1933.75Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 ... [more]
EPHX4_HUMAN2.463e-1836.51Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 ... [more]
EPHX3_XENTR4.201e-1840.00Epoxide hydrolase 3 OS=Xenopus tropicalis GN=ephx3... [more]
EPHX3_MOUSE5.487e-1838.02Epoxide hydrolase 3 OS=Mus musculus GN=Ephx3 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionC07002A03SK NTLeaf1 Citrus clementina cDNA clone C07002A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299746 ID=CX299746; Name=CX299746; organism=Citrus clementina; type=EST; length=485bp
CACGAGGGGAGAAAATAGAGCACACAACAGTAGCCACTAACGGCATAAAC
ATGCACGTGGCATCAATAGGGACAGGCCCAGCAGTTCTCTTCATTCACGG
CTTCCCTGAACTCTGGTATTCCTGGCGCAACCAGCTCCTCTATCTCTCTT
CCCGCGGCTACCGTGCCATTGCCCCAGACCTTCGTGGATACGGCGACACC
GACGCCCCACCCTCGGTCACGTCGTACACGGCACTCCATCTTGTCGGTGA
CCTCATCGGCCTCCTTGATAAATTGGGTATCCATCAAGTTTTCCTAGTGG
GTCATGACTGGGGTGCTTTGATTGCTTGGTATTTTTGTTTGTTTAGGCCG
GACAGAGTCAAGGCCTTAGTCAACATGAGCGTCCCCTTTCCTCCCAGAAA
CCCGGCTGTGAGACCTCTTAATAACTTCAGGGCTGTCTATGGTGATGATT
ATTATATCTGCAGATTTCAGGAACCTGGAGAGATT
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