CX299750
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299750 vs. ExPASy Swiss-Prot
Match: RL191_ARATH (60S ribosomal protein L19-1 OS=Arabidopsis thaliana GN=RPL19A PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.133e-23 Identity = 57/81 (70.37%), Postives = 59/81 (72.84%), Query Frame = -3 Query: 294 MYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLFDQFEAKRAKNKASXXXXXXXXXXXXAQGPGEKAVPAPQPAEGA 536 MYHDMYM+VKGNVFKNKRVLMESIHKSKAEKAREKTL DQFEAKRAKNKAS A+GPG P PA A Sbjct: 119 MYHDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREERLAKGPGGDVAPVAAPAPAA 199
BLAST of CX299750 vs. ExPASy Swiss-Prot
Match: RL193_ARATH (60S ribosomal protein L19-3 OS=Arabidopsis thaliana GN=RPL19C PE=2 SV=3) HSP 1 Score: 108.612 bits (270), Expect = 1.933e-23 Identity = 63/90 (70.00%), Postives = 65/90 (72.22%), Query Frame = -3 Query: 279 MYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLFDQFEAKRAKNKASXXXXXXXXXXXXAQGPG---EKAVPAPQPAE-GARKVKK 536 MYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTL DQFEAKRAKNKAS A+GPG A P Q AE A+K KK Sbjct: 119 MYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREERLAKGPGGDIPAAAPPAQTAEVPAKKSKK 208
BLAST of CX299750 vs. ExPASy Swiss-Prot
Match: RL192_ARATH (60S ribosomal protein L19-2 OS=Arabidopsis thaliana GN=RPL19B PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 9.592e-23 Identity = 61/90 (67.78%), Postives = 62/90 (68.89%), Query Frame = -3 Query: 279 MYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLFDQFEAKRAKNKASXXXXXXXXXXXXAQGP--GEKAVP--APQPAEGARKVKK 536 MYHDMYMKVKGNVFKNKRVLMESIHK KAEKAREKTL DQFEAKR KNKAS AQGP GE P APQ E +K K Sbjct: 119 MYHDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREERLAQGPGGGETTTPAGAPQQPEVTKKKSK 208
BLAST of CX299750 vs. ExPASy Swiss-Prot
Match: RL19_XENLA (60S ribosomal protein L19 OS=Xenopus laevis GN=rpl19 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.139e-14 Identity = 35/49 (71.43%), Postives = 42/49 (85.71%), Query Frame = -3 Query: 390 MYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLFDQFEAKRAKNK 536 MYH +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L DQ EA+R+K K Sbjct: 119 MYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTK 167
BLAST of CX299750 vs. ExPASy Swiss-Prot
Match: RL19_RAT (60S ribosomal protein L19 OS=Rattus norvegicus GN=Rpl19 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.139e-14 Identity = 35/49 (71.43%), Postives = 42/49 (85.71%), Query Frame = -3 Query: 390 MYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLFDQFEAKRAKNK 536 MYH +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L DQ EA+R+K K Sbjct: 119 MYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTK 167
BLAST of CX299750 vs. ExPASy Swiss-Prot
Match: RL19_PONAB (60S ribosomal protein L19 OS=Pongo abelii GN=RPL19 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.139e-14 Identity = 35/49 (71.43%), Postives = 42/49 (85.71%), Query Frame = -3 Query: 390 MYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLFDQFEAKRAKNK 536 MYH +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L DQ EA+R+K K Sbjct: 119 MYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTK 167
BLAST of CX299750 vs. ExPASy Swiss-Prot
Match: RL19_MOUSE (60S ribosomal protein L19 OS=Mus musculus GN=Rpl19 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.139e-14 Identity = 35/49 (71.43%), Postives = 42/49 (85.71%), Query Frame = -3 Query: 390 MYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLFDQFEAKRAKNK 536 MYH +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L DQ EA+R+K K Sbjct: 119 MYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTK 167
BLAST of CX299750 vs. ExPASy Swiss-Prot
Match: RL19_MACFA (60S ribosomal protein L19 OS=Macaca fascicularis GN=RPL19 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 8.139e-14 Identity = 35/49 (71.43%), Postives = 42/49 (85.71%), Query Frame = -3 Query: 390 MYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLFDQFEAKRAKNK 536 MYH +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L DQ EA+R+K K Sbjct: 119 MYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTK 167
BLAST of CX299750 vs. ExPASy Swiss-Prot
Match: RL19_HUMAN (60S ribosomal protein L19 OS=Homo sapiens GN=RPL19 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.139e-14 Identity = 35/49 (71.43%), Postives = 42/49 (85.71%), Query Frame = -3 Query: 390 MYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLFDQFEAKRAKNK 536 MYH +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L DQ EA+R+K K Sbjct: 119 MYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTK 167
BLAST of CX299750 vs. ExPASy Swiss-Prot
Match: RL19_BOVIN (60S ribosomal protein L19 OS=Bos taurus GN=RPL19 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.139e-14 Identity = 35/49 (71.43%), Postives = 42/49 (85.71%), Query Frame = -3 Query: 390 MYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLFDQFEAKRAKNK 536 MYH +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L DQ EA+R+K K Sbjct: 119 MYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTK 167 The following BLAST results are available for this feature:
BLAST of CX299750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299750 ID=CX299750; Name=CX299750; organism=Citrus clementina; type=EST; length=538bpback to top |