CX299760
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299760 vs. ExPASy Swiss-Prot
Match: PSAD_SPIOL (Photosystem I reaction center subunit II, chloroplastic OS=Spinacia oleracea GN=psaD PE=1 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 5.253e-33 Identity = 73/95 (76.84%), Postives = 77/95 (81.05%), Query Frame = 1 Query: 94 RHNAPRTNTIKAMAEGKTE--TPTKEAPVGFTPPKLDPNTPSPIFGGITGGLL*KAHVEEFYVITWESPKEQIFEMPTGGAAIIREGPNLLNLAR 372 RH++ R A AEGK T TKEAP GFTPP+LDPNTPSPIF G TGGLL KA VEEFYVITWESPKEQIFEMPTGGAAI+REGPNLL LAR Sbjct: 44 RHHSIRA---AAAAEGKAAAATETKEAPKGFTPPELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 135
BLAST of CX299760 vs. ExPASy Swiss-Prot
Match: PSAD_SOLLC (Photosystem I reaction center subunit II, chloroplastic OS=Solanum lycopersicum GN=psaD PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.170e-32 Identity = 70/95 (73.68%), Postives = 75/95 (78.95%), Query Frame = 1 Query: 91 LRHNAPRTNTIKAMAE-GKTETPTKEAPVGFTPPKLDPNTPSPIFGGITGGLL*KAHVEEFYVITWESPKEQIFEMPTGGAAIIREGPNLLNLAR 372 L+ T I+AMAE T K AP GFTPP+LDPNTPSPIFGG TGGLL KA VEEFYVITWESPKEQIFEMPTGGAAI+R+GPNLL LAR Sbjct: 37 LKSTVSVTRPIRAMAEEAPAATEEKPAPAGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGPNLLKLAR 131
BLAST of CX299760 vs. ExPASy Swiss-Prot
Match: PSAD_NICSY (Photosystem I reaction center subunit II, chloroplastic OS=Nicotiana sylvestris GN=psaD PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.528e-32 Identity = 72/91 (79.12%), Postives = 77/91 (84.62%), Query Frame = 1 Query: 100 NAPRTNTIKAMAEGKTETPTKEAPVGFTPPKLDPNTPSPIFGGITGGLL*KAHVEEFYVITWESPKEQIFEMPTGGAAIIREGPNLLNLAR 372 +APR I+AMAE + T EAPVGFTPP+LDPNTPSPIFGG TGGLL KA VEEFYVITWESPKEQIFEMPTGGAAI+REG NLL LAR Sbjct: 40 SAPRP--IRAMAE-EAATKEAEAPVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGANLLKLAR 127
BLAST of CX299760 vs. ExPASy Swiss-Prot
Match: PSAD1_ARATH (Photosystem I reaction center subunit II-1, chloroplastic OS=Arabidopsis thaliana GN=psaD1 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.294e-31 Identity = 67/90 (74.44%), Postives = 70/90 (77.78%), Query Frame = 1 Query: 103 APRTNTIKAMAEGKTETPTKEAPVGFTPPKLDPNTPSPIFGGITGGLL*KAHVEEFYVITWESPKEQIFEMPTGGAAIIREGPNLLNLAR 372 A R + A TKEAPVGFTPP+LDPNTPSPIF G TGGLL KA VEEFYVITW SPKEQIFEMPTGGAAI+REGPNLL LAR Sbjct: 42 AIRAEKTDSSAAAAAAPATKEAPVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTGGAAIMREGPNLLKLAR 131
BLAST of CX299760 vs. ExPASy Swiss-Prot
Match: PSAD2_ARATH (Photosystem I reaction center subunit II-2, chloroplastic OS=Arabidopsis thaliana GN=psaD2 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.916e-31 Identity = 68/90 (75.56%), Postives = 73/90 (81.11%), Query Frame = 1 Query: 118 TIKAMAEGKTETPT-----KEAPVGFTPPKLDPNTPSPIFGGITGGLL*KAHVEEFYVITWESPKEQIFEMPTGGAAIIREGPNLLNLAR 372 T A+ KTE+ + KEAPVGFTPP+LDPNTPSPIF G TGGLL KA VEEFYVITW SPKEQIFEMPTGGAAI+REGPNLL LAR Sbjct: 38 TKTAIRAEKTESSSAAPAVKEAPVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTGGAAIMREGPNLLKLAR 127
BLAST of CX299760 vs. ExPASy Swiss-Prot
Match: PSAD_CUCSA (Photosystem I reaction center subunit II, chloroplastic OS=Cucumis sativus GN=psaD PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.440e-30 Identity = 65/90 (72.22%), Postives = 72/90 (80.00%), Query Frame = 1 Query: 103 APRTNTIKAMAEGKTETPTKEAPVGFTPPKLDPNTPSPIFGGITGGLL*KAHVEEFYVITWESPKEQIFEMPTGGAAIIREGPNLLNLAR 372 A + + K AE +T EAP GF+PP+LDP+TPSPIF G TGGLL KA VEEFYVITWESPKEQIFEMPTGGAAI+REGPNLL LAR Sbjct: 44 ASSSRSFKVSAEAETSV---EAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLAR 130
BLAST of CX299760 vs. ExPASy Swiss-Prot
Match: PSAD_HORVU (Photosystem I reaction center subunit II, chloroplastic OS=Hordeum vulgare GN=psaD PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.698e-29 Identity = 59/73 (80.82%), Postives = 64/73 (87.67%), Query Frame = 1 Query: 154 PTKEAPVGFTPPKLDPNTPSPIFGGITGGLL*KAHVEEFYVITWESPKEQIFEMPTGGAAIIREGPNLLNLAR 372 P + AP GF PP+LDP+TPSPIFGG TGGLL KA VEEFYVITW SPKEQ+FEMPTGGAAI+REGPNLL LAR Sbjct: 56 PAEPAPAGFVPPQLDPSTPSPIFGGSTGGLLRKAQVEEFYVITWTSPKEQVFEMPTGGAAIMREGPNLLKLAR 128
BLAST of CX299760 vs. ExPASy Swiss-Prot
Match: PSAD_CHLRE (Photosystem I reaction center subunit II, chloroplastic OS=Chlamydomonas reinhardtii GN=psaD PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.773e-23 Identity = 56/94 (59.57%), Postives = 65/94 (69.15%), Query Frame = 1 Query: 94 RHNAPRTNTIKAMAEGKTETPTKEAPV-GFTPPKLDPNTPSPIFGGITGGLL*KAHVEEFYVITWESPKEQIFEMPTGGAAIIREGPNLLNLAR 372 R A R ++A AE K A +T P L+P+TPSPIFGG TGGLL KA EEFYVITWE+ KEQIFEMPTGGAAI+R+GPNLL + Sbjct: 24 RPAARRAVVVRAEAEAAPAAAKKAAEKPAWTVPTLNPDTPSPIFGGSTGGLLRKAQTEEFYVITWEAKKEQIFEMPTGGAAIMRQGPNLLKFGK 117
BLAST of CX299760 vs. ExPASy Swiss-Prot
Match: PSAD_CYAPA (Photosystem I reaction center subunit II, cyanelle OS=Cyanophora paradoxa GN=psaD PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.617e-19 Identity = 45/69 (65.22%), Postives = 51/69 (73.91%), Query Frame = 1 Query: 166 APVGFTPPKLDPNTPSPIFGGITGGLL*KAHVEEFYVITWESPKEQIFEMPTGGAAIIREGPNLLNLAR 372 AP F+ P L+ N P+PIFGG TGGLL KA VEEFY ITW E +FE+PTGGAAI+R G NLL LAR Sbjct: 70 APKPFSVPTLNLNAPTPIFGGSTGGLLRKAEVEEFYSITWTGKSETVFELPTGGAAIMRAGENLLRLAR 138
BLAST of CX299760 vs. ExPASy Swiss-Prot
Match: PSAD_MASLA (Photosystem I reaction center subunit II OS=Mastigocladus laminosus GN=psaD PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.005e-16 Identity = 41/54 (75.93%), Postives = 45/54 (83.33%), Query Frame = 1 Query: 211 SPIFGGITGGLL*KAHVEEFYVITWESPKEQIFEMPTGGAAIIREGPNLLNLAR 372 +PIFGG TGGLL KA VEE Y ITW SPKEQ+FEMPTGGAA +R+G NLL LAR Sbjct: 9 TPIFGGSTGGLLKKAEVEEKYAITWTSPKEQVFEMPTGGAAKMRQGQNLLYLAR 62 The following BLAST results are available for this feature:
BLAST of CX299760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299760 ID=CX299760; Name=CX299760; organism=Citrus clementina; type=EST; length=374bpback to top |