CX299786

Overview
NameCX299786
Unique NameCX299786
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length541
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX299786_ssr459 microsatellite CX299786_ssr459:459..476. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10254 contig Ccv1_Contig10254:1132..1672. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH2_ARATH (Adenosylhomocysteinase 2 OS=Arabidopsis thaliana GN=SAHH2 PE=1 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 8.818e-69
Identity = 122/150 (81.33%), Postives = 133/150 (88.67%), Query Frame = 3 
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            M+KMKNNAIVCNIGHFDNEID+LGLETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+G Y KKVYVLPKHLDEKV            T+LTK+Q+DY+S+  +GPYKP+HYRY
Sbjct:  336 MRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGARLTKLTKDQSDYVSIPVEGPYKPVHYRY 485
[Close]
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_TOBAC (Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAHH PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 1.152e-68
Identity = 124/150 (82.67%), Postives = 132/150 (88.00%), Query Frame = 3 
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            M+KMKNNAIVCNIGHFDNEID+LGLETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+G Y KKVYVLPKHLDEKV            T+L+K+QADYISV  +GPYKP HYRY
Sbjct:  336 MRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_NICSY (Adenosylhomocysteinase OS=Nicotiana sylvestris GN=SAHH PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 1.152e-68
Identity = 124/150 (82.67%), Postives = 132/150 (88.00%), Query Frame = 3 
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            M+KMKNNAIVCNIGHFDNEID+LGLETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+G Y KKVYVLPKHLDEKV            T+L+K+QADYISV  +GPYKP HYRY
Sbjct:  336 MRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_CATRO (Adenosylhomocysteinase OS=Catharanthus roseus GN=SAHH PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 1.152e-68
Identity = 124/150 (82.67%), Postives = 131/150 (87.33%), Query Frame = 3 
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            M+KMKNNAIVCNIGHFDNEID+LGLETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW E+ TG Y KKVYVLPKHLDEKV            T+LTK+QADYISV  +GPYKP HYRY
Sbjct:  336 MRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNERKTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLTKDQADYISVPIEGPYKPAHYRY 485
[Close]
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_LUPLU (Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 1.964e-68
Identity = 123/150 (82.00%), Postives = 132/150 (88.00%), Query Frame = 3 
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            MKKMKNNAIVCNIGHFDNEID+LGLET+PGVKRITIKPQTDRWVFPETN+GII+LAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+G Y KKVYVLPKHLDEKV            T+L+K+QADYISV  +GPYKP HYRY
Sbjct:  336 MKKMKNNAIVCNIGHFDNEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIILAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLEKLGAKLTKLSKDQADYISVPVEGPYKPFHYRY 485
[Close]
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_MEDSA (Adenosylhomocysteinase OS=Medicago sativa GN=SAHH PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 7.465e-68
Identity = 123/150 (82.00%), Postives = 131/150 (87.33%), Query Frame = 3 
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            MKKMKNNAIVCNIGHFDNEID+ GLETYPGVKRITIKPQTDRWVFPET SGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ+ELWKEK++G Y KKVYVLPKHLDEKV            T+L+K+QADYISV  +GPYKP HYRY
Sbjct:  336 MKKMKNNAIVCNIGHFDNEIDMHGLETYPGVKRITIKPQTDRWVFPETKSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQIELWKEKTSGKYEKKVYVLPKHLDEKVAALHLGQLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_PETCR (Adenosylhomocysteinase OS=Petroselinum crispum GN=SAHH PE=2 SV=2)

HSP 1 Score: 254.218 bits (648), Expect = 2.837e-67
Identity = 121/150 (80.67%), Postives = 130/150 (86.67%), Query Frame = 3 
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            M+KMKNNAIVCNIGHFDNEID+LGLETYPGVKRITIKPQTDRWVFP+T  GII+LAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+G Y KKVYVLPKHLDEKV            T+L+K+QADYISV  +GPYKP HYRY
Sbjct:  336 MRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTGRGIIILAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
[Close]
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_SOLLC (Adenosylhomocysteinase OS=Solanum lycopersicum GN=SAHH PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 8.253e-67
Identity = 121/150 (80.67%), Postives = 130/150 (86.67%), Query Frame = 3 
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            M+KMKNNAIVCNIGHFDNEID+ GLET+PGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW E+S+G Y KKVYVLPKHLDEKV            T+LTK+QADYI V  +GPYKP HYRY
Sbjct:  336 MRKMKNNAIVCNIGHFDNEIDMHGLETFPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNERSSGKYEKKVYVLPKHLDEKVAALHLGKFGAKLTKLTKDQADYIYVPVEGPYKPAHYRY 485
[Close]
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH1_ARATH (Adenosylhomocysteinase 1 OS=Arabidopsis thaliana GN=SAHH1 PE=1 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.078e-66
Identity = 119/150 (79.33%), Postives = 131/150 (87.33%), Query Frame = 3 
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            M+KMKNNAIVCNIGHFDNEID+LGLETYPGVKRITIKPQTDRWVFPET +GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EK++G Y KKVYVLPKHLDEKV            T+L+K+Q+DY+S+  +GPYKP HYRY
Sbjct:  336 MRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKPPHYRY 485
[Close]
BLAST of CX299786 vs. ExPASy Swiss-Prot
Match: SAHH_MESCR (Adenosylhomocysteinase OS=Mesembryanthemum crystallinum GN=SAHH PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 1.556e-65
Identity = 119/150 (79.33%), Postives = 130/150 (86.67%), Query Frame = 3 
Query:    3 MKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG*Y*KKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 452
            M+KMKNNAIVCNIGHFDNEID+LGLE YPGVKRITIKPQTDR+VFPETN+GIIVLAEGRLM LGCATGHPSFVMSCSFTNQVIAQLELW E+++G Y KKVYVLPKHLDEKV            T+L+K+QADYISV  +GPYKP HYRY
Sbjct:  336 MRKMKNNAIVCNIGHFDNEIDMLGLENYPGVKRITIKPQTDRFVFPETNTGIIVLAEGRLMKLGCATGHPSFVMSCSFTNQVIAQLELWNERASGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKPAHYRY 485
The following BLAST results are available for this feature:
BLAST of CX299786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 234
Match NameE-valueIdentityDescription
SAHH2_ARATH8.818e-6981.33Adenosylhomocysteinase 2 OS=Arabidopsis thaliana G... [more]
SAHH_TOBAC1.152e-6882.67Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAH... [more]
SAHH_NICSY1.152e-6882.67Adenosylhomocysteinase OS=Nicotiana sylvestris GN=... [more]
SAHH_CATRO1.152e-6882.67Adenosylhomocysteinase OS=Catharanthus roseus GN=S... [more]
SAHH_LUPLU1.964e-6882.00Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH P... [more]
SAHH_MEDSA7.465e-6882.00Adenosylhomocysteinase OS=Medicago sativa GN=SAHH ... [more]
SAHH_PETCR2.837e-6780.67Adenosylhomocysteinase OS=Petroselinum crispum GN=... [more]
SAHH_SOLLC8.253e-6780.67Adenosylhomocysteinase OS=Solanum lycopersicum GN=... [more]
SAHH1_ARATH1.078e-6679.33Adenosylhomocysteinase 1 OS=Arabidopsis thaliana G... [more]
SAHH_MESCR1.556e-6579.33Adenosylhomocysteinase OS=Mesembryanthemum crystal... [more]

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Properties
Property NameValue
Genbank descriptionC07002D10SK NTLeaf1 Citrus clementina cDNA clone C07002D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299786 ID=CX299786; Name=CX299786; organism=Citrus clementina; type=EST; length=541bp
ACATGAAGAAGATGAAGAACAATGCAATTGTTTGCAACATTGGTCACTTT
GATAATGAAATTGATGTGCTCGGTCTTGAGACCTACCCGGGTGTTAAGCG
CATTACCATCAAGCCCCAAACTGATAGGTGGGTCTTCCCCGAGACCAACT
CAGGCATCATCGTGTTGGCTGAGGGACGTCTCATGAACTTGGGATGTGCC
ACTGGGCACCCCAGCTTTGTGATGTCCTGTTCCTTCACCAATCAGGTGAT
TGCCCAGCTTGAGCTCTGGAAGGAGAAGAGCACCGGCTAGTACTAGAAGA
AGGTGTATGTTCTGCCCAAGCACCTCGATGAGAAGGTTGCTGCTCTTCAC
CTTGGCAAACTTGGAGCTAAGCTCACCAGGCTCACCAAGGAGCAGGCTGA
CTACATCAGTGTGTCCGCCGATGGTCCTTACAAGCCTCTTCACTACAGGT
ACTAAGTGGAAGAAGAAGAAGAAGAATAGTGAATGTTTTGAGGGAAAGAA
ACAAAATATTTGGCCGGCTTGATTGTTTTCAATGATGATCT
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