CX299790

Overview
NameCX299790
Unique NameCX299790
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length491
Libraries
Library NameType
NTLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig860 contig Ccv1_Contig860:117..607. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX299790 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 4.350e-26
Identity = 60/158 (37.97%), Postives = 94/158 (59.49%), Query Frame = 3
Query:   24 PLLDVNGNKVQSTLKYYIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYNNST-IVRESTDLNLRFSVLLSGRD-YCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNN 491
            P+LD +G+++Q+ ++YY++S+I                 CP  V+Q  SD+ NG  +  S  ++   +VR STD+N+ F  +   RD  C+   +W++DNYD ++GKW++TT G+ G PG  TL +WFK+EK G     YK   CPSVC+SC   C++
Sbjct:   30 PVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPI---RDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVL--GYKFRFCPSVCDSCTTLCSD 182          
BLAST of CX299790 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 2.020e-23
Identity = 57/163 (34.97%), Postives = 88/163 (53.99%), Query Frame = 3
Query:   12 SVPEPLLDVNGNKVQSTLKYYIVSAI--WXXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNN 491
            S P P+LD++G K+++   YYIV  +                   CP  V+Q   ++ +   L   P N    +VR STDLN+ FS  +  R       +W++D YD ++G++F+T GG+ G+PG ET+ +WFK+E+     G YK+V CP+VC SC   C +
Sbjct:   31 SAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCR--WTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCG-SGFYKLVFCPTVCGSCKVKCGD 190          
BLAST of CX299790 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.150e-19
Identity = 58/161 (36.02%), Postives = 84/161 (52.17%), Query Frame = 3
Query:   18 PEPLLDVNGNKVQSTLKYYIVSAIW-XXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYNN--STIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNN 491
            P+P++D++G  V   + Y++VSAIW                 CPL V+Q P D  NG  +  S   N    IV ES DLN++F++ ++    CNE   WKVD +    G W +T GG  G+ G E+  + FK++K G  P +YK   CPS   + +  CNN
Sbjct:    3 PKPIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFD--NGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN----CNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFESTHSMFKIKKAG-LPFSYKFHFCPSYPRTRLIPCNN 155          
BLAST of CX299790 vs. ExPASy Swiss-Prot
Match: SPORB_IPOBA (Sporamin B OS=Ipomoea batatas GN=GSPO-B1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.964e-12
Identity = 49/159 (30.82%), Postives = 75/159 (47.17%), Query Frame = 3
Query:    6 TSSVPEPLLDVNGNKVQSTLKYYIVSAIW--XXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESC 473
            T+S   P+LD+NG++V++   YYIVSAIW                  C  DVI   SD  NG  +T++P +  +T+V  ST    RF++  +    C     W +  +D+ SG++F+  G            N FK+E + +    YKI +C    E C
Sbjct:   34 TASSETPVLDINGDEVRAGENYYIVSAIWGAGGGGLRLVRLDSSSNECASDVIVSRSDFDNGDPITITPADPEATVVMPSTYQTFRFNI--ATNKLCVNNVNWGI-KHDSESGQYFVKAGEF-----VSDNSNQFKIEVVNDNLNAYKISYCQFGTEKC 184          
BLAST of CX299790 vs. ExPASy Swiss-Prot
Match: SPOR1_IPOBA (Sporamin A OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.040e-11
Identity = 47/159 (29.56%), Postives = 76/159 (47.80%), Query Frame = 3
Query:    9 SSVPEPLLDVNGNKVQSTLKYYIVSAIW-XXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYN---NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESC 473
            +S   P+LD+NG++V++   YY+VSAIW                 C  DVI  P+D+ NG  +T++P      ST+V  ST    RF++  +    C     W +  +D+ASG++F+  G            N FK+E +     +YK+ +C    + C
Sbjct:   37 ASSETPVLDINGDEVRAGGNYYMVSAIWGAGGGGLRLAHLDMMSKCATDVIVSPNDLDNGDPITITPATADPESTVVMASTYQTFRFNI--ATNKLCVNNVNWGI-QHDSASGQYFLKAGEF-----VSDNSNQFKIELVDANLNSYKLTYCQFGSDKC 187          
BLAST of CX299790 vs. ExPASy Swiss-Prot
Match: SPOR2_IPOBA (Sporamin B OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.774e-11
Identity = 48/159 (30.19%), Postives = 75/159 (47.17%), Query Frame = 3
Query:    6 TSSVPEPLLDVNGNKVQSTLKYYIVSAIW--XXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESC 473
            T+S   P+LD+NG++V++   YY+VSAIW                  C  DVI   SD  NG  +T++P +  +T+V  ST    RF++  +    C     W +  +D+ SG++F+  G            N FK+E + +    YKI +C    E C
Sbjct:   34 TASSETPVLDINGDEVRAGENYYMVSAIWGAGGGGLRLVRLDSSSNECASDVIVSRSDFDNGDPITITPADPEATVVMPSTYQTFRFNI--ATNKLCVNNVNWGI-KHDSESGQYFVKAGEF-----VSDNSNQFKIEVVNDNLNAYKISYCQFGTEKC 184          
The following BLAST results are available for this feature:
BLAST of CX299790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
ASP_THECC4.350e-2637.9721 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU2.020e-2334.97Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA5.150e-1936.02Latex serine proteinase inhibitor OS=Carica papaya... [more]
SPORB_IPOBA7.964e-1230.82Sporamin B OS=Ipomoea batatas GN=GSPO-B1 PE=2 SV=1[more]
SPOR1_IPOBA1.040e-1129.56Sporamin A OS=Ipomoea batatas PE=2 SV=1[more]
SPOR2_IPOBA1.774e-1130.19Sporamin B OS=Ipomoea batatas PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionC07002E02SK NTLeaf1 Citrus clementina cDNA clone C07002E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX299790 ID=CX299790; Name=CX299790; organism=Citrus clementina; type=EST; length=491bp
TGGGCACCTCATCAGTTCCTGAACCTCTCCTTGATGTCAACGGCAACAAG
GTCCAATCCACCCTTAAGTACTACATAGTCTCAGCCATCTGGGGAGCTGG
CGGTGGTGGAGTTAGCCTACACGGTGGCAGAAACGGATATTGTCCGCTGG
ACGTTATCCAATTACCTTCTGATATGCAAAATGGAATCGAATTAACACTG
TCACCGTATAACAATTCTACAATTGTCCGAGAATCCACTGATCTCAACTT
GAGATTCTCAGTGTTGCTATCTGGACGTGACTATTGTAACGAACAACCGT
TGTGGAAAGTTGATAATTATGACGCTGCATCAGGCAAATGGTTTATAACA
ACCGGGGGACTTGATGGTCATCCTGGAGCTGAAACTTTGCTAAATTGGTT
TAAGCTTGAGAAAATTGGAAATTTTCCAGGTACATACAAAATCGTTCATT
GTCCATCCGTTTGCGAGTCTTGTGTCAAACACTGCAACAAC
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