CX299792
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299792 vs. ExPASy Swiss-Prot
Match: CCD31_ARATH (Cyclin-D3-1 OS=Arabidopsis thaliana GN=CYCD3-1 PE=1 SV=3) HSP 1 Score: 157.918 bits (398), Expect = 2.496e-38 Identity = 77/107 (71.96%), Postives = 87/107 (81.31%), Query Frame = 3 Query: 195 DSDVLVVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWK 515 D L R EAV W+L+VNAHYGFSTL A+LAI YLD+F+ S+ Q DKPWM+QL++V CLSLAAKVEETQVPLLLD QVE KYVFE K IQRMELL+LSTLEWK Sbjct: 79 DDVYLSTDRKEAVGWILRVNAHYGFSTLAAVLAITYLDKFICSYSLQRDKPWMLQLVSVACLSLAAKVEETQVPLLLDFQVEETKYVFEAKTIQRMELLILSTLEWK 185
BLAST of CX299792 vs. ExPASy Swiss-Prot
Match: CCD33_ARATH (Cyclin-D3-3 OS=Arabidopsis thaliana GN=CYCD3-3 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 3.051e-36 Identity = 70/107 (65.42%), Postives = 87/107 (81.31%), Query Frame = 3 Query: 195 DSDVLVVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWK 515 D + LV+ R +A++W+ KV +HYGF++LTA+LA+NY DRF+ S FQ DKPWM QL A+ CLSLAAKVEE +VP LLD QVE A+YVFE K IQRMELLVLSTL+W+ Sbjct: 78 DDEFLVLCREKALDWIFKVKSHYGFNSLTALLAVNYFDRFITSRKFQTDKPWMSQLTALACLSLAAKVEEIRVPFLLDFQVEEARYVFEAKTIQRMELLVLSTLDWR 184
BLAST of CX299792 vs. ExPASy Swiss-Prot
Match: CCD32_ARATH (Cyclin-D3-2 OS=Arabidopsis thaliana GN=CYCD3-2 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 5.205e-36 Identity = 72/103 (69.90%), Postives = 86/103 (83.50%), Query Frame = 3 Query: 207 LVVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWK 515 LV R EA++WVL+V +HYGF++LTAILA+NY DRF+ S Q DKPWM QL+AV LSLAAKVEE QVPLLLDLQVE A+Y+FE K IQRMELL+LSTL+W+ Sbjct: 92 LVSCRKEALDWVLRVKSHYGFTSLTAILAVNYFDRFMTSIKLQTDKPWMSQLVAVASLSLAAKVEEIQVPLLLDLQVEEARYLFEAKTIQRMELLILSTLQWR 194
BLAST of CX299792 vs. ExPASy Swiss-Prot
Match: CCD41_ORYSJ (Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 4.268e-30 Identity = 64/107 (59.81%), Postives = 80/107 (74.77%), Query Frame = 3 Query: 195 DSDVLVVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWK 515 D D+ + R +A++W+ KV+++Y F+ LTA LA+NYLDRFL + K WM QLLAV CLSLAAK+EET VP LDLQV +YVFE K IQRMELLVLSTL+W+ Sbjct: 95 DGDLDLRVRMDAIDWIWKVHSYYSFAPLTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQVGEERYVFEAKTIQRMELLVLSTLKWR 201
BLAST of CX299792 vs. ExPASy Swiss-Prot
Match: CCD21_ARATH (Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3) HSP 1 Score: 125.561 bits (314), Expect = 1.373e-28 Identity = 60/105 (57.14%), Postives = 80/105 (76.19%), Query Frame = 3 Query: 201 DVLVVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWK 515 D+ + R++A++W+LKV AHY F L L++NYLDRFL S+ DK W QLLAV+CLSLA+K+EET VP ++DLQVE K+VFE K I+RMELLV++TL W+ Sbjct: 91 DLDLSVRNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWR 195
BLAST of CX299792 vs. ExPASy Swiss-Prot
Match: CCD22_ORYSJ (Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.518e-27 Identity = 56/99 (56.57%), Postives = 78/99 (78.79%), Query Frame = 3 Query: 219 RSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWK 515 R +A++W+ KV+++Y F L+ LA+NYLDRFL SF+ D+ WM QLL+V+CLSLA K+EET VPL +DLQV A+YVFE + I+RMEL+V+ TL+W+ Sbjct: 95 RKDAIDWICKVHSYYNFGPLSLYLAVNYLDRFLSSFNLPHDESWMQQLLSVSCLSLATKMEETVVPLPMDLQVFDAEYVFEARHIKRMELIVMKTLKWR 193
BLAST of CX299792 vs. ExPASy Swiss-Prot
Match: CCD11_ARATH (Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3) HSP 1 Score: 120.939 bits (302), Expect = 3.382e-27 Identity = 59/100 (59.00%), Postives = 72/100 (72.00%), Query Frame = 3 Query: 216 ARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWK 515 AR ++V W+LKV A+Y F LTA LA+NY+DRFL + W +QLLAV CLSLAAK+EE VP L D QV G KY+FE K I+RMELLVLS L+W+ Sbjct: 81 AREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWR 180
BLAST of CX299792 vs. ExPASy Swiss-Prot
Match: CCD21_ORYSJ (Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 7.533e-27 Identity = 59/100 (59.00%), Postives = 74/100 (74.00%), Query Frame = 3 Query: 216 ARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWK 515 AR+E+V W+LKV + GF LTA LA+NY+DRFL H + W +QLLAV CLSLAAK+EET VP LLDLQVE ++YVFE + I RME L+L+ L W+ Sbjct: 81 ARAESVSWILKVQEYNGFLPLTAYLAVNYMDRFLSLRHLPEGQGWAMQLLAVACLSLAAKMEETLVPSLLDLQVECSRYVFEPRTICRMEFLILTALNWR 180
BLAST of CX299792 vs. ExPASy Swiss-Prot
Match: CCD31_ORYSJ (Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYCD3-1 PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 8.329e-26 Identity = 60/103 (58.25%), Postives = 76/103 (73.79%), Query Frame = 3 Query: 207 LVVARSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQIDKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWK 515 LV RS+A++W+ KV+ Y F LTA+L++NYLDRFL F ++ M QLLAV LSLAAK+EET VP LDLQV AKYVFET+ I+RMEL VL+ L+W+ Sbjct: 86 LVAVRSDAIDWIWKVHELYKFGPLTAVLSVNYLDRFLSVFDLPQEEACMTQLLAVASLSLAAKMEETVVPHPLDLQVCDAKYVFETRTIKRMELAVLNALKWR 188
BLAST of CX299792 vs. ExPASy Swiss-Prot
Match: CCD23_ORYSJ (Putative cyclin-D2-3 OS=Oryza sativa subsp. japonica GN=CYCD2-3 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 8.329e-26 Identity = 57/101 (56.44%), Postives = 72/101 (71.29%), Query Frame = 3 Query: 219 RSEAVEWVLKVNAHYGFSTLTAILAINYLDRFLRSFHFQI--DKPWMIQLLAVTCLSLAAKVEETQVPLLLDLQVEGAKYVFETKAIQRMELLVLSTLEWK 515 R A++W+ KV A+Y F L A LA+NYLDRFL S F + D PWM QLL V CLSLAAK+EET P LDLQV +YVF+ + I RME++VL+TL+W+ Sbjct: 104 RIAAIDWICKVQAYYSFGPLCAYLAVNYLDRFLSSVEFSVTNDMPWMQQLLIVACLSLAAKMEETAAPGTLDLQVCNPEYVFDAETIHRMEIIVLTTLKWR 204 The following BLAST results are available for this feature:
BLAST of CX299792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299792 ID=CX299792; Name=CX299792; organism=Citrus clementina; type=EST; length=516bpback to top |